RNA–Protein interactions for RNA: ENST00000566482.5

CNEP1R1-208, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-208ENST00000566482 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.66■□□□□ 0.1
CNEP1R1-208ENST00000566482 GPATCH3Q96I76 525 aa15.66■□□□□ 0.1
CNEP1R1-208ENST00000566482 BEGAINQ9BUH8 593 aa15.66■□□□□ 0.1
CNEP1R1-208ENST00000566482 ECHDC1Q9NTX5 307 aa15.66■□□□□ 0.1
CNEP1R1-208ENST00000566482 PAG1Q9NWQ8 432 aa15.66■□□□□ 0.1
CNEP1R1-208ENST00000566482 AK9Q5TCS8 1911 aa15.65■□□□□ 0.1
CNEP1R1-208ENST00000566482 NPM3O75607 178 aaKnown RBP15.65■□□□□ 0.1
CNEP1R1-208ENST00000566482 DYNLL1P63167 89 aaKnown RBP15.65■□□□□ 0.1
CNEP1R1-208ENST00000566482 MAP3K9P80192 1104 aa15.65■□□□□ 0.1
CNEP1R1-208ENST00000566482 VGLL4Q14135 290 aa15.65■□□□□ 0.1
CNEP1R1-208ENST00000566482 SPRYD7Q5W111 196 aa15.65■□□□□ 0.1
CNEP1R1-208ENST00000566482 TSHZ3Q63HK5 1081 aa15.65■□□□□ 0.1
CNEP1R1-208ENST00000566482 TMED8Q6PL24 325 aaPredicted RBP15.65■□□□□ 0.1
CNEP1R1-208ENST00000566482 MIGA1Q8NAN2 632 aa15.65■□□□□ 0.1
CNEP1R1-208ENST00000566482 GCC1Q96CN9 775 aa15.65■□□□□ 0.1
CNEP1R1-208ENST00000566482 WNK4Q96J92 1243 aa15.65■□□□□ 0.1
CNEP1R1-208ENST00000566482 WRNIP1Q96S55 665 aa15.65■□□□□ 0.1
CNEP1R1-208ENST00000566482 CSRNP1Q96S65 589 aa15.65■□□□□ 0.1
CNEP1R1-208ENST00000566482 ZNF341Q9BYN7 854 aa15.65■□□□□ 0.1
CNEP1R1-208ENST00000566482 ELP3Q9H9T3 547 aa15.65■□□□□ 0.1
CNEP1R1-208ENST00000566482 ATRNL1Q5VV63 1379 aa15.64■□□□□ 0.09
CNEP1R1-208ENST00000566482 DDTLA6NHG4 134 aaPredicted RBP15.64■□□□□ 0.09
CNEP1R1-208ENST00000566482 PDE6AP16499 860 aa15.64■□□□□ 0.09
CNEP1R1-208ENST00000566482 GJA5P36382 358 aa15.64■□□□□ 0.09
CNEP1R1-208ENST00000566482 CTCFP49711 727 aaPredicted RBP15.64■□□□□ 0.09
CNEP1R1-208ENST00000566482 SLC9C2Q5TAH2 1124 aa15.64■□□□□ 0.09
CNEP1R1-208ENST00000566482 ANKRD45Q5TZF3 282 aa15.64■□□□□ 0.09
CNEP1R1-208ENST00000566482 OTUD7AQ8TE49 926 aaPredicted RBP15.64■□□□□ 0.09
CNEP1R1-208ENST00000566482 OSBPL5Q9H0X9 879 aaPredicted RBP15.64■□□□□ 0.09
CNEP1R1-208ENST00000566482 RWDD1Q9H446 243 aaPredicted RBP15.64■□□□□ 0.09
CNEP1R1-208ENST00000566482 CSADQ9Y600 493 aa15.64■□□□□ 0.09
CNEP1R1-208ENST00000566482 HSPA8P11142 646 aaKnown RBP15.63■□□□□ 0.09
CNEP1R1-208ENST00000566482 REM2Q8IYK8 340 aaPredicted RBP15.63■□□□□ 0.09
CNEP1R1-208ENST00000566482 TGFBRAP1Q8WUH2 860 aa15.63■□□□□ 0.09
CNEP1R1-208ENST00000566482 ZBTB47Q9UFB7 747 aaPredicted RBP15.63■□□□□ 0.09
CNEP1R1-208ENST00000566482 COL2A1P02458 1487 aaPredicted RBP15.63■□□□□ 0.09
CNEP1R1-208ENST00000566482 TCRBV5S4A2TA0A5A2 114 aa15.62■□□□□ 0.09
CNEP1R1-208ENST00000566482 CA12O43570 354 aa15.62■□□□□ 0.09
CNEP1R1-208ENST00000566482 IGHDP01880 384 aa15.62■□□□□ 0.09
CNEP1R1-208ENST00000566482 ZBTB48P10074 688 aaPredicted RBP15.62■□□□□ 0.09
CNEP1R1-208ENST00000566482 INPP5BP32019 993 aa15.62■□□□□ 0.09
CNEP1R1-208ENST00000566482 MAPKAPK5Q8IW41 473 aa15.62■□□□□ 0.09
CNEP1R1-208ENST00000566482 CNKSR2Q8WXI2 1034 aa15.62■□□□□ 0.09
CNEP1R1-208ENST00000566482 ZKSCAN4Q969J2 545 aaPredicted RBP15.62■□□□□ 0.09
CNEP1R1-208ENST00000566482 OPTNQ96CV9 577 aa15.62■□□□□ 0.09
CNEP1R1-208ENST00000566482 TSKSQ9UJT2 592 aa15.62■□□□□ 0.09
CNEP1R1-208ENST00000566482 ZNF112Q9UJU3 913 aa15.62■□□□□ 0.09
CNEP1R1-208ENST00000566482 SNCAIPQ9Y6H5 919 aa15.62■□□□□ 0.09
CNEP1R1-208ENST00000566482 CDK5RAP2Q96SN8 1893 aa15.62■□□□□ 0.09
CNEP1R1-208ENST00000566482 FLT1P17948 1338 aa15.62■□□□□ 0.09
CNEP1R1-208ENST00000566482 ZNF532Q9HCE3 1301 aa15.62■□□□□ 0.09
CNEP1R1-208ENST00000566482 FOCADQ5VW36 1801 aa15.61■□□□□ 0.09
CNEP1R1-208ENST00000566482 MAGEB6P1A0A0J9YX57 407 aa15.61■□□□□ 0.09
CNEP1R1-208ENST00000566482 SLURP2P0DP57 97 aa15.61■□□□□ 0.09
CNEP1R1-208ENST00000566482 LBX1P52954 281 aa15.61■□□□□ 0.09
CNEP1R1-208ENST00000566482 CERS3Q8IU89 383 aa15.61■□□□□ 0.09
CNEP1R1-208ENST00000566482 SMC5Q8IY18 1101 aa15.61■□□□□ 0.09
CNEP1R1-208ENST00000566482 RIOK1Q9BRS2 568 aaKnown RBP15.61■□□□□ 0.09
CNEP1R1-208ENST00000566482 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.61■□□□□ 0.09
CNEP1R1-208ENST00000566482 TTC41PQ6P2S7 1318 aa15.61■□□□□ 0.09
CNEP1R1-208ENST00000566482 SALL3Q9BXA9 1300 aa15.61■□□□□ 0.09
CNEP1R1-208ENST00000566482 MANSC4A6NHS7 340 aaPredicted RBP15.6■□□□□ 0.09
CNEP1R1-208ENST00000566482 PHF20L1A8MW92 1017 aa15.6■□□□□ 0.09
CNEP1R1-208ENST00000566482 MX1P20591 662 aa15.6■□□□□ 0.09
CNEP1R1-208ENST00000566482 ADD2P35612 726 aa15.6■□□□□ 0.09
CNEP1R1-208ENST00000566482 TM4SF4P48230 202 aa15.6■□□□□ 0.09
CNEP1R1-208ENST00000566482 MAP3K10Q02779 954 aa15.6■□□□□ 0.09
CNEP1R1-208ENST00000566482 SREBF2Q12772 1141 aa15.6■□□□□ 0.09
CNEP1R1-208ENST00000566482 SLFNL1Q499Z3 407 aa15.6■□□□□ 0.09
CNEP1R1-208ENST00000566482 PI4K2BQ8TCG2 481 aa15.6■□□□□ 0.09
CNEP1R1-208ENST00000566482 OTUD5Q96G74 571 aa15.6■□□□□ 0.09
CNEP1R1-208ENST00000566482 RNF186Q9NXI6 227 aa15.6■□□□□ 0.09
CNEP1R1-208ENST00000566482 LAMB1P07942 1786 aa15.59■□□□□ 0.09
CNEP1R1-208ENST00000566482 SPDYE5A6NIY4 337 aa15.59■□□□□ 0.09
CNEP1R1-208ENST00000566482 FAM196BA6NMK8 535 aa15.59■□□□□ 0.09
CNEP1R1-208ENST00000566482 ERC2O15083 957 aa15.59■□□□□ 0.09
CNEP1R1-208ENST00000566482 TRPA1O75762 1119 aa15.59■□□□□ 0.09
CNEP1R1-208ENST00000566482 CHGBP05060 677 aa15.59■□□□□ 0.09
CNEP1R1-208ENST00000566482 USP5P45974 858 aa15.59■□□□□ 0.09
CNEP1R1-208ENST00000566482 ERO1BQ86YB8 467 aa15.59■□□□□ 0.09
CNEP1R1-208ENST00000566482 LNPKQ9C0E8 428 aa15.59■□□□□ 0.09
CNEP1R1-208ENST00000566482 SAGE1Q9NXZ1 904 aa15.59■□□□□ 0.09
CNEP1R1-208ENST00000566482 SAP30BPQ9UHR5 308 aaKnown RBP15.59■□□□□ 0.09
CNEP1R1-208ENST00000566482 MYH7P12883 1935 aa15.58■□□□□ 0.09
CNEP1R1-208ENST00000566482 TBC1D12O60347 775 aa15.58■□□□□ 0.08
CNEP1R1-208ENST00000566482 GLRX3O76003 335 aaKnown RBP15.58■□□□□ 0.08
CNEP1R1-208ENST00000566482 NOL9Q5SY16 702 aaKnown RBP15.58■□□□□ 0.08
CNEP1R1-208ENST00000566482 B4GALNT3Q6L9W6 998 aa15.58■□□□□ 0.08
CNEP1R1-208ENST00000566482 KBTBD3Q8NAB2 608 aa15.58■□□□□ 0.08
CNEP1R1-208ENST00000566482 DHX36Q9H2U1 1008 aaKnown RBP15.58■□□□□ 0.08
CNEP1R1-208ENST00000566482 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.58■□□□□ 0.08
CNEP1R1-208ENST00000566482 PRDM10Q9NQV6 1147 aa15.58■□□□□ 0.08
CNEP1R1-208ENST00000566482 PALD1Q9ULE6 856 aa15.58■□□□□ 0.08
CNEP1R1-208ENST00000566482 SIPA1L1O43166 1804 aa15.57■□□□□ 0.08
CNEP1R1-208ENST00000566482 PPIL2Q13356 520 aa15.57■□□□□ 0.08
CNEP1R1-208ENST00000566482 UBE3CQ15386 1083 aa15.57■□□□□ 0.08
CNEP1R1-208ENST00000566482 COL13A1Q5TAT6 717 aaPredicted RBP15.57■□□□□ 0.08
CNEP1R1-208ENST00000566482 ZSCAN25Q6NSZ9 544 aa15.57■□□□□ 0.08
CNEP1R1-208ENST00000566482 LCORLQ8N3X6 602 aa15.57■□□□□ 0.08
CNEP1R1-208ENST00000566482 MS4A4AQ96JQ5 239 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms