RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 ARHGEF6Q15052 776 aa24.8■■□□□ 1.56
CLN6-207ENST00000566347 NSUN4Q96CB9 384 aaKnown RBP24.8■■□□□ 1.56
CLN6-207ENST00000566347 EFCC1Q9HA90 598 aa24.8■■□□□ 1.56
CLN6-207ENST00000566347 NOP58Q9Y2X3 529 aaKnown RBP24.8■■□□□ 1.56
CLN6-207ENST00000566347 ATRNL1Q5VV63 1379 aa24.8■■□□□ 1.56
CLN6-207ENST00000566347 BTBD19C9JJ37 291 aa24.79■■□□□ 1.56
CLN6-207ENST00000566347 CCDC158Q5M9N0 1113 aa24.79■■□□□ 1.56
CLN6-207ENST00000566347 TBC1D9Q6ZT07 1266 aa24.79■■□□□ 1.56
CLN6-207ENST00000566347 RAI14Q9P0K7 980 aa24.79■■□□□ 1.56
CLN6-207ENST00000566347 NPM3O75607 178 aaKnown RBP24.78■■□□□ 1.56
CLN6-207ENST00000566347 TTC39AQ5SRH9 613 aa24.78■■□□□ 1.56
CLN6-207ENST00000566347 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.78■■□□□ 1.56
CLN6-207ENST00000566347 ZNF384Q8TF68 577 aa24.78■■□□□ 1.56
CLN6-207ENST00000566347 LRP2BPQ9P2M1 347 aa24.78■■□□□ 1.56
CLN6-207ENST00000566347 KCNH4Q9UQ05 1017 aa24.78■■□□□ 1.56
CLN6-207ENST00000566347 MS4A1P11836 297 aa24.77■■□□□ 1.56
CLN6-207ENST00000566347 RHBDL3P58872 404 aa24.77■■□□□ 1.56
CLN6-207ENST00000566347 PICALMQ13492 652 aa24.77■■□□□ 1.56
CLN6-207ENST00000566347 SH3BP5LQ7L8J4 393 aa24.77■■□□□ 1.56
CLN6-207ENST00000566347 DDX4Q9NQI0 724 aaKnown RBP24.77■■□□□ 1.56
CLN6-207ENST00000566347 PTPN22Q9Y2R2 807 aa24.77■■□□□ 1.56
CLN6-207ENST00000566347 PHF20L1A8MW92 1017 aa24.76■■□□□ 1.55
CLN6-207ENST00000566347 TLR2O60603 784 aa24.76■■□□□ 1.55
CLN6-207ENST00000566347 MAP3K10Q02779 954 aa24.76■■□□□ 1.55
CLN6-207ENST00000566347 DBNDD2Q9BQY9 259 aa24.76■■□□□ 1.55
CLN6-207ENST00000566347 HTTP42858 3142 aa24.76■■□□□ 1.55
CLN6-207ENST00000566347 DDTLA6NHG4 134 aaPredicted RBP24.75■■□□□ 1.55
CLN6-207ENST00000566347 ANKRD23Q86SG2 305 aa24.75■■□□□ 1.55
CLN6-207ENST00000566347 SCYL3Q8IZE3 742 aa24.75■■□□□ 1.55
CLN6-207ENST00000566347 ZNF512BQ96KM6 892 aaPredicted RBP24.75■■□□□ 1.55
CLN6-207ENST00000566347 PICK1Q9NRD5 415 aa24.75■■□□□ 1.55
CLN6-207ENST00000566347 TNRC18O15417 2968 aaPredicted RBP24.75■■□□□ 1.55
CLN6-207ENST00000566347 CXCL11O14625 94 aa24.74■■□□□ 1.55
CLN6-207ENST00000566347 IGSF3O75054 1194 aa24.74■■□□□ 1.55
CLN6-207ENST00000566347 CEP85Q6P2H3 762 aa24.74■■□□□ 1.55
CLN6-207ENST00000566347 PANK1Q8TE04 598 aa24.74■■□□□ 1.55
CLN6-207ENST00000566347 NOL10Q9BSC4 688 aaKnown RBP24.74■■□□□ 1.55
CLN6-207ENST00000566347 MAST2Q6P0Q8 1798 aa24.73■■□□□ 1.55
CLN6-207ENST00000566347 COL2A1P02458 1487 aaPredicted RBP24.73■■□□□ 1.55
CLN6-207ENST00000566347 SNRKQ9NRH2 765 aa24.73■■□□□ 1.55
CLN6-207ENST00000566347 TBC1D12O60347 775 aa24.72■■□□□ 1.55
CLN6-207ENST00000566347 CTNND1O60716 968 aaKnown RBP24.72■■□□□ 1.55
CLN6-207ENST00000566347 KIF22Q14807 665 aa24.72■■□□□ 1.55
CLN6-207ENST00000566347 NAA16Q6N069 864 aaPredicted RBP24.72■■□□□ 1.55
CLN6-207ENST00000566347 PDE4DIPQ5VU43 2346 aa24.71■■□□□ 1.55
CLN6-207ENST00000566347 PDHXO00330 501 aa24.71■■□□□ 1.55
CLN6-207ENST00000566347 BAG3O95817 575 aa24.71■■□□□ 1.55
CLN6-207ENST00000566347 PTPRAP18433 802 aa24.71■■□□□ 1.55
CLN6-207ENST00000566347 CAP1Q01518 475 aa24.71■■□□□ 1.55
CLN6-207ENST00000566347 ERC1Q8IUD2 1116 aa24.71■■□□□ 1.55
CLN6-207ENST00000566347 TEX11Q8IYF3 940 aa24.71■■□□□ 1.55
CLN6-207ENST00000566347 DBNLQ9UJU6 430 aaKnown RBP24.71■■□□□ 1.55
CLN6-207ENST00000566347 ZHX2Q9Y6X8 837 aa24.71■■□□□ 1.55
CLN6-207ENST00000566347 DOCK1Q14185 1865 aa24.7■■□□□ 1.55
CLN6-207ENST00000566347 CYP2E1P05181 493 aaPredicted RBP24.7■■□□□ 1.54
CLN6-207ENST00000566347 PLCG2P16885 1265 aa24.7■■□□□ 1.54
CLN6-207ENST00000566347 OSBPL5Q9H0X9 879 aaPredicted RBP24.7■■□□□ 1.54
CLN6-207ENST00000566347 LACTBP83111 547 aaPredicted RBP24.69■■□□□ 1.54
CLN6-207ENST00000566347 MOGSQ13724 837 aa24.69■■□□□ 1.54
CLN6-207ENST00000566347 FASTKD5Q7L8L6 764 aaKnown RBP24.69■■□□□ 1.54
CLN6-207ENST00000566347 ARMC5Q96C12 935 aa24.69■■□□□ 1.54
CLN6-207ENST00000566347 EAF2Q96CJ1 260 aaPredicted RBP24.69■■□□□ 1.54
CLN6-207ENST00000566347 A0A0G2JLL6 359 aaPredicted RBP24.68■■□□□ 1.54
CLN6-207ENST00000566347 GNRH1P01148 92 aa24.68■■□□□ 1.54
CLN6-207ENST00000566347 HSP90AB4PQ58FF6 505 aa24.68■■□□□ 1.54
CLN6-207ENST00000566347 C17orf99Q6UX52 265 aa24.68■■□□□ 1.54
CLN6-207ENST00000566347 PRRT2Q7Z6L0 340 aaPredicted RBP24.68■■□□□ 1.54
CLN6-207ENST00000566347 PARK7Q99497 189 aaKnown RBP24.68■■□□□ 1.54
CLN6-207ENST00000566347 CCDC8Q9H0W5 538 aaPredicted RBP24.68■■□□□ 1.54
CLN6-207ENST00000566347 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.68■■□□□ 1.54
CLN6-207ENST00000566347 AFG3L2Q9Y4W6 797 aa24.68■■□□□ 1.54
CLN6-207ENST00000566347 ZAP70P43403 619 aa24.67■■□□□ 1.54
CLN6-207ENST00000566347 PPP4CP60510 307 aa24.67■■□□□ 1.54
CLN6-207ENST00000566347 SH3RF3Q8TEJ3 882 aaPredicted RBP24.67■■□□□ 1.54
CLN6-207ENST00000566347 AATFQ9NY61 560 aaKnown RBP eCLIP24.67■■□□□ 1.54
CLN6-207ENST00000566347 TLR7Q9NYK1 1049 aaKnown RBP24.67■■□□□ 1.54
CLN6-207ENST00000566347 EXOC6BQ9Y2D4 811 aa24.67■■□□□ 1.54
CLN6-207ENST00000566347 DDX19BQ9UMR2 479 aa24.66■■□□□ 1.54
CLN6-207ENST00000566347 CENPFP49454 3210 aa24.65■■□□□ 1.54
CLN6-207ENST00000566347 ADGRA2Q96PE1 1338 aa24.65■■□□□ 1.54
CLN6-207ENST00000566347 SLURP2P0DP57 97 aa24.65■■□□□ 1.54
CLN6-207ENST00000566347 PRMT2P55345 433 aa24.65■■□□□ 1.54
CLN6-207ENST00000566347 GPAT2Q6NUI2 795 aa24.65■■□□□ 1.54
CLN6-207ENST00000566347 NBPF11Q86T75 865 aa24.65■■□□□ 1.54
CLN6-207ENST00000566347 DHX36Q9H2U1 1008 aaKnown RBP24.65■■□□□ 1.54
CLN6-207ENST00000566347 CPA4Q9UI42 421 aa24.65■■□□□ 1.54
CLN6-207ENST00000566347 HERC5Q9UII4 1024 aaKnown RBP24.65■■□□□ 1.54
CLN6-207ENST00000566347 PTCH2Q9Y6C5 1203 aa24.65■■□□□ 1.54
CLN6-207ENST00000566347 MYO5AQ9Y4I1 1855 aaKnown RBP24.64■■□□□ 1.54
CLN6-207ENST00000566347 PHIPQ8WWQ0 1821 aa24.64■■□□□ 1.54
CLN6-207ENST00000566347 SLC9C1Q4G0N8 1177 aa24.64■■□□□ 1.54
CLN6-207ENST00000566347 RPAP2Q8IXW5 612 aaPredicted RBP24.64■■□□□ 1.54
CLN6-207ENST00000566347 ARHGAP39Q9C0H5 1083 aa24.64■■□□□ 1.54
CLN6-207ENST00000566347 CHMP4BQ9H444 224 aaKnown RBP24.64■■□□□ 1.54
CLN6-207ENST00000566347 PIH1D3Q9NQM4 214 aaKnown RBP24.64■■□□□ 1.54
CLN6-207ENST00000566347 PI4KBQ9UBF8 816 aa24.64■■□□□ 1.54
CLN6-207ENST00000566347 SLC45A1Q9Y2W3 748 aa24.64■■□□□ 1.54
CLN6-207ENST00000566347 PTPRFP10586 1907 aa24.64■■□□□ 1.53
CLN6-207ENST00000566347 RBBP6Q7Z6E9 1792 aaKnown RBP24.63■■□□□ 1.53
CLN6-207ENST00000566347 FAM196BA6NMK8 535 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms