RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 SRRDQ9UH36 339 aa20.45■□□□□ 0.86
TSR3-202ENST00000566296 FMNL1O95466 1100 aaPredicted RBP20.44■□□□□ 0.86
TSR3-202ENST00000566296 ZFPM1Q8IX07 1006 aa20.44■□□□□ 0.86
TSR3-202ENST00000566296 RAET1EQ8TD07 263 aa20.44■□□□□ 0.86
TSR3-202ENST00000566296 ARHGAP45Q92619 1136 aa20.44■□□□□ 0.86
TSR3-202ENST00000566296 XAGE2Q96GT9 111 aa20.44■□□□□ 0.86
TSR3-202ENST00000566296 MYPNQ86TC9 1320 aa20.44■□□□□ 0.86
TSR3-202ENST00000566296 BTDP43251 543 aa20.43■□□□□ 0.86
TSR3-202ENST00000566296 TIMM10P62072 90 aa20.43■□□□□ 0.86
TSR3-202ENST00000566296 PICALMQ13492 652 aa20.43■□□□□ 0.86
TSR3-202ENST00000566296 MOGSQ13724 837 aa20.43■□□□□ 0.86
TSR3-202ENST00000566296 HABP4Q5JVS0 413 aaKnown RBP20.43■□□□□ 0.86
TSR3-202ENST00000566296 ERICH6Q7L0X2 663 aa20.43■□□□□ 0.86
TSR3-202ENST00000566296 FASTKD5Q7L8L6 764 aaKnown RBP20.43■□□□□ 0.86
TSR3-202ENST00000566296 TRIM47Q96LD4 638 aa20.43■□□□□ 0.86
TSR3-202ENST00000566296 ZHX2Q9Y6X8 837 aa20.43■□□□□ 0.86
TSR3-202ENST00000566296 MROH7-TTC4A0A0A0MT08 1334 aa20.43■□□□□ 0.86
TSR3-202ENST00000566296 PTPRFP10586 1907 aa20.43■□□□□ 0.86
TSR3-202ENST00000566296 MGAMO43451 1857 aa20.42■□□□□ 0.86
TSR3-202ENST00000566296 OSBPP22059 807 aa20.42■□□□□ 0.86
TSR3-202ENST00000566296 FCGRTP55899 365 aa20.42■□□□□ 0.86
TSR3-202ENST00000566296 TFCP2Q12800 502 aa20.42■□□□□ 0.86
TSR3-202ENST00000566296 MTX1Q13505 466 aa20.42■□□□□ 0.86
TSR3-202ENST00000566296 CEP290O15078 2479 aa20.41■□□□□ 0.86
TSR3-202ENST00000566296 A0A0G2JLL6 359 aaPredicted RBP20.41■□□□□ 0.86
TSR3-202ENST00000566296 PHF20L1A8MW92 1017 aa20.41■□□□□ 0.86
TSR3-202ENST00000566296 CTGFP29279 349 aa20.41■□□□□ 0.86
TSR3-202ENST00000566296 GORABQ5T7V8 394 aa20.41■□□□□ 0.86
TSR3-202ENST00000566296 GADL1Q6ZQY3 521 aa20.41■□□□□ 0.86
TSR3-202ENST00000566296 PRRT2Q7Z6L0 340 aaPredicted RBP20.41■□□□□ 0.86
TSR3-202ENST00000566296 FAM163AQ96GL9 167 aaPredicted RBP20.41■□□□□ 0.86
TSR3-202ENST00000566296 IPO8O15397 1037 aaKnown RBP20.4■□□□□ 0.86
TSR3-202ENST00000566296 CYP2C8P10632 490 aa20.4■□□□□ 0.86
TSR3-202ENST00000566296 BCRP11274 1271 aa20.4■□□□□ 0.86
TSR3-202ENST00000566296 PTPRAP18433 802 aa20.4■□□□□ 0.86
TSR3-202ENST00000566296 GRK4P32298 578 aa20.4■□□□□ 0.86
TSR3-202ENST00000566296 GPAT2Q6NUI2 795 aa20.4■□□□□ 0.86
TSR3-202ENST00000566296 SH3BP5LQ7L8J4 393 aa20.4■□□□□ 0.86
TSR3-202ENST00000566296 NEUROD6Q96NK8 337 aa20.4■□□□□ 0.86
TSR3-202ENST00000566296 DDTLA6NHG4 134 aaPredicted RBP20.39■□□□□ 0.85
TSR3-202ENST00000566296 UBXN2AP68543 259 aa20.39■□□□□ 0.85
TSR3-202ENST00000566296 GSTO1P78417 241 aa20.39■□□□□ 0.85
TSR3-202ENST00000566296 NKX2-3Q8TAU0 364 aa20.39■□□□□ 0.85
TSR3-202ENST00000566296 DDX4Q9NQI0 724 aaKnown RBP20.39■□□□□ 0.85
TSR3-202ENST00000566296 GPR75-ASB3A0A0A6YYF3 556 aa20.38■□□□□ 0.85
TSR3-202ENST00000566296 CTNND1O60716 968 aaKnown RBP20.38■□□□□ 0.85
TSR3-202ENST00000566296 GNAI2P04899 355 aa20.38■□□□□ 0.85
TSR3-202ENST00000566296 LDHCP07864 332 aa20.38■□□□□ 0.85
TSR3-202ENST00000566296 MAP3K10Q02779 954 aa20.38■□□□□ 0.85
TSR3-202ENST00000566296 MECOMQ03112 1051 aa20.38■□□□□ 0.85
TSR3-202ENST00000566296 MTFR1Q15390 333 aa20.38■□□□□ 0.85
TSR3-202ENST00000566296 SMCR8Q8TEV9 937 aaPredicted RBP20.38■□□□□ 0.85
TSR3-202ENST00000566296 BIN2Q9UBW5 565 aaPredicted RBP20.38■□□□□ 0.85
TSR3-202ENST00000566296 SLC45A1Q9Y2W3 748 aa20.38■□□□□ 0.85
TSR3-202ENST00000566296 AFG3L2Q9Y4W6 797 aa20.38■□□□□ 0.85
TSR3-202ENST00000566296 PHIPQ8WWQ0 1821 aa20.38■□□□□ 0.85
TSR3-202ENST00000566296 PRKCZQ05513 592 aa20.37■□□□□ 0.85
TSR3-202ENST00000566296 SPATA5Q8NB90 893 aa20.37■□□□□ 0.85
TSR3-202ENST00000566296 SLAIN1Q8ND83 568 aa20.37■□□□□ 0.85
TSR3-202ENST00000566296 TRIM75PA6NK02 468 aa20.36■□□□□ 0.85
TSR3-202ENST00000566296 NPM3O75607 178 aaKnown RBP20.36■□□□□ 0.85
TSR3-202ENST00000566296 MAP4K4O95819 1239 aaPredicted RBP20.36■□□□□ 0.85
TSR3-202ENST00000566296 TRIM27P14373 513 aa20.36■□□□□ 0.85
TSR3-202ENST00000566296 RHBDL3P58872 404 aa20.36■□□□□ 0.85
TSR3-202ENST00000566296 G3BP1Q13283 466 aaKnown RBP eCLIP20.36■□□□□ 0.85
TSR3-202ENST00000566296 ATF7IPQ6VMQ6 1270 aa20.36■□□□□ 0.85
TSR3-202ENST00000566296 SHISA4Q96DD7 197 aa20.36■□□□□ 0.85
TSR3-202ENST00000566296 RAI14Q9P0K7 980 aa20.36■□□□□ 0.85
TSR3-202ENST00000566296 HMG20BQ9P0W2 317 aa20.36■□□□□ 0.85
TSR3-202ENST00000566296 COL2A1P02458 1487 aaPredicted RBP20.36■□□□□ 0.85
TSR3-202ENST00000566296 TBC1D12O60347 775 aa20.35■□□□□ 0.85
TSR3-202ENST00000566296 ARID4AP29374 1257 aaPredicted RBP20.35■□□□□ 0.85
TSR3-202ENST00000566296 FRAT1Q92837 279 aaPredicted RBP20.35■□□□□ 0.85
TSR3-202ENST00000566296 MAST2Q6P0Q8 1798 aa20.35■□□□□ 0.85
TSR3-202ENST00000566296 ATAD5Q96QE3 1844 aa20.34■□□□□ 0.85
TSR3-202ENST00000566296 GJB1P08034 283 aa20.34■□□□□ 0.85
TSR3-202ENST00000566296 UQCRFS1P1P0C7P4 283 aa20.34■□□□□ 0.85
TSR3-202ENST00000566296 SLURP2P0DP57 97 aa20.34■□□□□ 0.85
TSR3-202ENST00000566296 CCL5P13501 91 aa20.34■□□□□ 0.85
TSR3-202ENST00000566296 PI16Q6UXB8 463 aa20.34■□□□□ 0.85
TSR3-202ENST00000566296 NSUN4Q96CB9 384 aaKnown RBP20.34■□□□□ 0.85
TSR3-202ENST00000566296 NOL10Q9BSC4 688 aaKnown RBP20.34■□□□□ 0.85
TSR3-202ENST00000566296 RNF208Q9H0X6 261 aa20.34■□□□□ 0.85
TSR3-202ENST00000566296 OSBPL5Q9H0X9 879 aaPredicted RBP20.34■□□□□ 0.85
TSR3-202ENST00000566296 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.34■□□□□ 0.858e-10■■■■□ 26.3
TSR3-202ENST00000566296 PNMA3Q9UL41 463 aa20.34■□□□□ 0.85
TSR3-202ENST00000566296 AGTPBP1Q9UPW5 1226 aa20.34■□□□□ 0.85
TSR3-202ENST00000566296 TRIOBPQ9H2D6 2365 aa20.34■□□□□ 0.85
TSR3-202ENST00000566296 TNPO2O14787 897 aaKnown RBP20.33■□□□□ 0.85
TSR3-202ENST00000566296 GJA8P48165 433 aa20.33■□□□□ 0.85
TSR3-202ENST00000566296 CCDC84Q86UT8 332 aaPredicted RBP20.33■□□□□ 0.85
TSR3-202ENST00000566296 ZNF384Q8TF68 577 aa20.33■□□□□ 0.85
TSR3-202ENST00000566296 LRP2BPQ9P2M1 347 aa20.33■□□□□ 0.85
TSR3-202ENST00000566296 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.33■□□□□ 0.85
TSR3-202ENST00000566296 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.33■□□□□ 0.85
TSR3-202ENST00000566296 LOC285556D6RIA3 1793 aa20.32■□□□□ 0.84
TSR3-202ENST00000566296 PNMA6EA0A0J9YXQ4 647 aa20.32■□□□□ 0.84
TSR3-202ENST00000566296 TBC1D9Q6ZT07 1266 aa20.32■□□□□ 0.84
TSR3-202ENST00000566296 TEX11Q8IYF3 940 aa20.32■□□□□ 0.84
TSR3-202ENST00000566296 CLUAP1Q96AJ1 413 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms