RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.58■■□□□ 1.21
USB1-213ENST00000566292 GPR75-ASB3A0A0A6YYF3 556 aa22.57■■□□□ 1.2
USB1-213ENST00000566292 RHBDL3P58872 404 aa22.57■■□□□ 1.2
USB1-213ENST00000566292 NSUN4Q96CB9 384 aaKnown RBP22.57■■□□□ 1.2
USB1-213ENST00000566292 EFCC1Q9HA90 598 aa22.57■■□□□ 1.2
USB1-213ENST00000566292 ZCCHC17Q9NP64 241 aaKnown RBP22.57■■□□□ 1.2
USB1-213ENST00000566292 GPR108Q9NPR9 543 aa22.57■■□□□ 1.2
USB1-213ENST00000566292 KCNH4Q9UQ05 1017 aa22.57■■□□□ 1.2
USB1-213ENST00000566292 PTPN22Q9Y2R2 807 aa22.57■■□□□ 1.2
USB1-213ENST00000566292 MAST2Q6P0Q8 1798 aa22.57■■□□□ 1.2
USB1-213ENST00000566292 DOCK1Q14185 1865 aa22.57■■□□□ 1.2
USB1-213ENST00000566292 PTPRFP10586 1907 aa22.57■■□□□ 1.2
USB1-213ENST00000566292 PHIPQ8WWQ0 1821 aa22.57■■□□□ 1.2
USB1-213ENST00000566292 DDTLA6NHG4 134 aaPredicted RBP22.56■■□□□ 1.2
USB1-213ENST00000566292 PHF20L1A8MW92 1017 aa22.56■■□□□ 1.2
USB1-213ENST00000566292 SLURP2P0DP57 97 aa22.56■■□□□ 1.2
USB1-213ENST00000566292 PICALMQ13492 652 aa22.56■■□□□ 1.2
USB1-213ENST00000566292 TNNI3KQ59H18 835 aa22.56■■□□□ 1.2
USB1-213ENST00000566292 FPGT-TNNI3KV9GXZ4 949 aa22.56■■□□□ 1.2
USB1-213ENST00000566292 TLR2O60603 784 aa22.55■■□□□ 1.2
USB1-213ENST00000566292 UQCRFS1P1P0C7P4 283 aa22.55■■□□□ 1.2
USB1-213ENST00000566292 MAP3K10Q02779 954 aa22.55■■□□□ 1.2
USB1-213ENST00000566292 ZSCAN29Q8IWY8 852 aaPredicted RBP22.55■■□□□ 1.2
USB1-213ENST00000566292 DBNDD2Q9BQY9 259 aa22.55■■□□□ 1.2
USB1-213ENST00000566292 CDK5RAP2Q96SN8 1893 aa22.55■■□□□ 1.2
USB1-213ENST00000566292 RBBP6Q7Z6E9 1792 aaKnown RBP22.55■■□□□ 1.2
USB1-213ENST00000566292 SURF6O75683 361 aaKnown RBP22.54■■□□□ 1.2
USB1-213ENST00000566292 OS9Q13438 667 aaPredicted RBP22.54■■□□□ 1.2
USB1-213ENST00000566292 MOGSQ13724 837 aa22.54■■□□□ 1.2
USB1-213ENST00000566292 RAI14Q9P0K7 980 aa22.54■■□□□ 1.2
USB1-213ENST00000566292 NOP58Q9Y2X3 529 aaKnown RBP22.54■■□□□ 1.2
USB1-213ENST00000566292 CENPFP49454 3210 aa22.54■■□□□ 1.2
USB1-213ENST00000566292 LDHCP07864 332 aa22.53■■□□□ 1.2
USB1-213ENST00000566292 GSTO1P78417 241 aa22.53■■□□□ 1.2
USB1-213ENST00000566292 SNRKQ9NRH2 765 aa22.53■■□□□ 1.2
USB1-213ENST00000566292 TTC39AQ5SRH9 613 aa22.52■■□□□ 1.2
USB1-213ENST00000566292 ANKRD23Q86SG2 305 aa22.52■■□□□ 1.2
USB1-213ENST00000566292 SCYL3Q8IZE3 742 aa22.52■■□□□ 1.2
USB1-213ENST00000566292 PANK1Q8TE04 598 aa22.52■■□□□ 1.2
USB1-213ENST00000566292 ATAD5Q96QE3 1844 aa22.52■■□□□ 1.2
USB1-213ENST00000566292 KIAA0100Q14667 2235 aaKnown RBP22.51■■□□□ 1.19
USB1-213ENST00000566292 NPM3O75607 178 aaKnown RBP22.51■■□□□ 1.19
USB1-213ENST00000566292 ARHGAP39Q9C0H5 1083 aa22.51■■□□□ 1.19
USB1-213ENST00000566292 LRP2BPQ9P2M1 347 aa22.51■■□□□ 1.19
USB1-213ENST00000566292 FOCADQ5VW36 1801 aa22.51■■□□□ 1.19
USB1-213ENST00000566292 SIPA1L1O43166 1804 aa22.5■■□□□ 1.19
USB1-213ENST00000566292 PDHXO00330 501 aa22.5■■□□□ 1.19
USB1-213ENST00000566292 CXCL11O14625 94 aa22.5■■□□□ 1.19
USB1-213ENST00000566292 PTPRAP18433 802 aa22.5■■□□□ 1.19
USB1-213ENST00000566292 CCDC158Q5M9N0 1113 aa22.5■■□□□ 1.19
USB1-213ENST00000566292 CEP85Q6P2H3 762 aa22.5■■□□□ 1.19
USB1-213ENST00000566292 C17orf99Q6UX52 265 aa22.5■■□□□ 1.19
USB1-213ENST00000566292 ADGRA2Q96PE1 1338 aa22.5■■□□□ 1.19
USB1-213ENST00000566292 COL2A1P02458 1487 aaPredicted RBP22.49■■□□□ 1.19
USB1-213ENST00000566292 MAP4K4O95819 1239 aaPredicted RBP22.49■■□□□ 1.19
USB1-213ENST00000566292 LACTBP83111 547 aaPredicted RBP22.49■■□□□ 1.19
USB1-213ENST00000566292 ARMC5Q96C12 935 aa22.49■■□□□ 1.19
USB1-213ENST00000566292 PICK1Q9NRD5 415 aa22.49■■□□□ 1.19
USB1-213ENST00000566292 TLR7Q9NYK1 1049 aaKnown RBP22.49■■□□□ 1.19
USB1-213ENST00000566292 DBNLQ9UJU6 430 aaKnown RBP22.49■■□□□ 1.19
USB1-213ENST00000566292 PTCH2Q9Y6C5 1203 aa22.49■■□□□ 1.19
USB1-213ENST00000566292 ZHX2Q9Y6X8 837 aa22.49■■□□□ 1.19
USB1-213ENST00000566292 MGAMO43451 1857 aa22.48■■□□□ 1.19
USB1-213ENST00000566292 POTEFA5A3E0 1075 aa22.48■■□□□ 1.19
USB1-213ENST00000566292 CTNND1O60716 968 aaKnown RBP22.48■■□□□ 1.19
USB1-213ENST00000566292 CYP2E1P05181 493 aaPredicted RBP22.48■■□□□ 1.19
USB1-213ENST00000566292 ARHGEF6Q15052 776 aa22.48■■□□□ 1.19
USB1-213ENST00000566292 GPAT2Q6NUI2 795 aa22.48■■□□□ 1.19
USB1-213ENST00000566292 EAF2Q96CJ1 260 aaPredicted RBP22.48■■□□□ 1.19
USB1-213ENST00000566292 ZNF512BQ96KM6 892 aaPredicted RBP22.48■■□□□ 1.19
USB1-213ENST00000566292 CCDC8Q9H0W5 538 aaPredicted RBP22.48■■□□□ 1.19
USB1-213ENST00000566292 OSBPL5Q9H0X9 879 aaPredicted RBP22.48■■□□□ 1.19
USB1-213ENST00000566292 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.48■■□□□ 1.19
USB1-213ENST00000566292 CPA4Q9UI42 421 aa22.48■■□□□ 1.19
USB1-213ENST00000566292 AFG3L2Q9Y4W6 797 aa22.48■■□□□ 1.19
USB1-213ENST00000566292 FAM196BA6NMK8 535 aa22.47■■□□□ 1.19
USB1-213ENST00000566292 TBC1D12O60347 775 aa22.47■■□□□ 1.19
USB1-213ENST00000566292 ZAP70P43403 619 aa22.47■■□□□ 1.19
USB1-213ENST00000566292 TEX11Q8IYF3 940 aa22.47■■□□□ 1.19
USB1-213ENST00000566292 SH3RF3Q8TEJ3 882 aaPredicted RBP22.47■■□□□ 1.19
USB1-213ENST00000566292 A0A0G2JLL6 359 aaPredicted RBP22.46■■□□□ 1.19
USB1-213ENST00000566292 CTGFP29279 349 aa22.46■■□□□ 1.19
USB1-213ENST00000566292 NAA16Q6N069 864 aaPredicted RBP22.46■■□□□ 1.19
USB1-213ENST00000566292 PRRT2Q7Z6L0 340 aaPredicted RBP22.46■■□□□ 1.19
USB1-213ENST00000566292 ADGRA1Q86SQ6 560 aa22.46■■□□□ 1.19
USB1-213ENST00000566292 KIF22Q14807 665 aa22.45■■□□□ 1.18
USB1-213ENST00000566292 CCDC84Q86UT8 332 aaPredicted RBP22.45■■□□□ 1.18
USB1-213ENST00000566292 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.45■■□□□ 1.18
USB1-213ENST00000566292 PIH1D3Q9NQM4 214 aaKnown RBP22.45■■□□□ 1.18
USB1-213ENST00000566292 AATFQ9NY61 560 aaKnown RBP eCLIP22.45■■□□□ 1.18
USB1-213ENST00000566292 ECM2O94769 699 aaPredicted RBP22.44■■□□□ 1.18
USB1-213ENST00000566292 CYP2C8P10632 490 aa22.44■■□□□ 1.18
USB1-213ENST00000566292 BRCA2P51587 3418 aa22.44■■□□□ 1.18
USB1-213ENST00000566292 ZNF333Q96JL9 665 aa22.44■■□□□ 1.18
USB1-213ENST00000566292 EXOC6BQ9Y2D4 811 aa22.44■■□□□ 1.18
USB1-213ENST00000566292 PPP4CP60510 307 aa22.43■■□□□ 1.18
USB1-213ENST00000566292 RRP1BQ14684 758 aaKnown RBP22.43■■□□□ 1.18
USB1-213ENST00000566292 SLC9C1Q4G0N8 1177 aa22.43■■□□□ 1.18
USB1-213ENST00000566292 FASTKD5Q7L8L6 764 aaKnown RBP22.43■■□□□ 1.18
USB1-213ENST00000566292 PARK7Q99497 189 aaKnown RBP22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms