RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 EYA1Q99502 592 aa12.79□□□□□ -0.36
UBFD1-205ENST00000566136 MYCLP1P12525 358 aaPredicted RBP12.78□□□□□ -0.36
UBFD1-205ENST00000566136 TCIRG1Q13488 830 aa12.78□□□□□ -0.36
UBFD1-205ENST00000566136 PANK1Q8TE04 598 aa12.78□□□□□ -0.36
UBFD1-205ENST00000566136 PHF12Q96QT6 1004 aa12.78□□□□□ -0.36
UBFD1-205ENST00000566136 GINM1Q9NU53 330 aa12.78□□□□□ -0.36
UBFD1-205ENST00000566136 TRPC5Q9UL62 973 aaPredicted RBP12.78□□□□□ -0.36
UBFD1-205ENST00000566136 ARSHQ5FYA8 562 aa12.78□□□□□ -0.36
UBFD1-205ENST00000566136 C6orf132Q5T0Z8 1188 aa12.78□□□□□ -0.36
UBFD1-205ENST00000566136 NBPF6Q5VWK0 638 aa12.78□□□□□ -0.36
UBFD1-205ENST00000566136 CASC1Q6TDU7 716 aa12.78□□□□□ -0.36
UBFD1-205ENST00000566136 NBPF4Q96M43 638 aa12.78□□□□□ -0.36
UBFD1-205ENST00000566136 FAM50BQ9Y247 325 aa12.78□□□□□ -0.36
UBFD1-205ENST00000566136 PCDHGB3Q9Y5G1 929 aa12.78□□□□□ -0.36
UBFD1-205ENST00000566136 TTC36A6NLP5 189 aa12.77□□□□□ -0.37
UBFD1-205ENST00000566136 PDXDC1Q6P996 788 aa12.77□□□□□ -0.37
UBFD1-205ENST00000566136 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.77□□□□□ -0.37
UBFD1-205ENST00000566136 NELL2Q99435 816 aa12.77□□□□□ -0.37
UBFD1-205ENST00000566136 ANAPC4Q9UJX5 808 aa12.77□□□□□ -0.37
UBFD1-205ENST00000566136 IPPQ9Y573 584 aa12.77□□□□□ -0.37
UBFD1-205ENST00000566136 PRR36Q9H6K5 1346 aa12.77□□□□□ -0.37
UBFD1-205ENST00000566136 BCL9LQ86UU0 1499 aa12.77□□□□□ -0.37
UBFD1-205ENST00000566136 PITPNM1O00562 1244 aa12.77□□□□□ -0.37
UBFD1-205ENST00000566136 DIAPH1O60610 1272 aaKnown RBP12.77□□□□□ -0.37
UBFD1-205ENST00000566136 IFIT2P09913 472 aaKnown RBP12.77□□□□□ -0.37
UBFD1-205ENST00000566136 COL6A1P12109 1028 aa12.77□□□□□ -0.37
UBFD1-205ENST00000566136 FBLN1P23142 703 aa12.77□□□□□ -0.37
UBFD1-205ENST00000566136 IRS1P35568 1242 aa12.77□□□□□ -0.37
UBFD1-205ENST00000566136 ADD2P35612 726 aa12.77□□□□□ -0.37
UBFD1-205ENST00000566136 FAM129BQ96TA1 746 aa12.77□□□□□ -0.37
UBFD1-205ENST00000566136 MAP10Q9P2G4 905 aa12.77□□□□□ -0.37
UBFD1-205ENST00000566136 ATRNO75882 1429 aa12.76□□□□□ -0.37
UBFD1-205ENST00000566136 TNS3Q68CZ2 1445 aa12.76□□□□□ -0.37
UBFD1-205ENST00000566136 ADGRB2O60241 1585 aa12.76□□□□□ -0.37
UBFD1-205ENST00000566136 A6NJY4 79 aa12.76□□□□□ -0.37
UBFD1-205ENST00000566136 GUCY2FP51841 1108 aa12.76□□□□□ -0.37
UBFD1-205ENST00000566136 NFKB2Q00653 900 aa12.76□□□□□ -0.37
UBFD1-205ENST00000566136 MTMR1Q13613 665 aa12.76□□□□□ -0.37
UBFD1-205ENST00000566136 HSCBQ8IWL3 235 aa12.76□□□□□ -0.37
UBFD1-205ENST00000566136 TNNQ9UQP3 1299 aa12.76□□□□□ -0.37
UBFD1-205ENST00000566136 ANKARQ7Z5J8 1434 aa12.76□□□□□ -0.37
UBFD1-205ENST00000566136 MARF1Q9Y4F3 1742 aaKnown RBP12.76□□□□□ -0.37
UBFD1-205ENST00000566136 VSTM5A8MXK1 200 aa12.76□□□□□ -0.37
UBFD1-205ENST00000566136 F2P00734 622 aa12.76□□□□□ -0.37
UBFD1-205ENST00000566136 HSP90AA1P07900 732 aaKnown RBP12.76□□□□□ -0.37
UBFD1-205ENST00000566136 RARSP54136 660 aaKnown RBP12.76□□□□□ -0.37
UBFD1-205ENST00000566136 NYAP1Q6ZVC0 841 aa12.76□□□□□ -0.37
UBFD1-205ENST00000566136 SPATC1Q76KD6 591 aa12.76□□□□□ -0.37
UBFD1-205ENST00000566136 WDR63Q8IWG1 891 aa12.76□□□□□ -0.37
UBFD1-205ENST00000566136 AK5Q9Y6K8 562 aa12.76□□□□□ -0.37
UBFD1-205ENST00000566136 CCDC163A0A0D9SF12 145 aa12.75□□□□□ -0.37
UBFD1-205ENST00000566136 FAM13AO94988 1023 aa12.75□□□□□ -0.37
UBFD1-205ENST00000566136 RGS3P49796 1198 aa12.75□□□□□ -0.37
UBFD1-205ENST00000566136 OSBPL7Q9BZF2 842 aa12.75□□□□□ -0.37
UBFD1-205ENST00000566136 RBSNQ9H1K0 784 aa12.75□□□□□ -0.37
UBFD1-205ENST00000566136 SAGE1Q9NXZ1 904 aa12.75□□□□□ -0.37
UBFD1-205ENST00000566136 PPM1FP49593 454 aaPredicted RBP12.74□□□□□ -0.37
UBFD1-205ENST00000566136 SETDB1Q15047 1291 aa12.74□□□□□ -0.37
UBFD1-205ENST00000566136 C16orf54Q6UWD8 224 aa12.74□□□□□ -0.37
UBFD1-205ENST00000566136 CLASRPQ8N2M8 674 aaKnown RBP12.74□□□□□ -0.37
UBFD1-205ENST00000566136 ZNF622Q969S3 477 aaKnown RBP eCLIP12.74□□□□□ -0.37
UBFD1-205ENST00000566136 GPR101Q96P66 508 aaPredicted RBP12.74□□□□□ -0.37
UBFD1-205ENST00000566136 TRIM56Q9BRZ2 755 aaKnown RBP12.74□□□□□ -0.37
UBFD1-205ENST00000566136 NGRNQ9NPE2 291 aaKnown RBP12.74□□□□□ -0.37
UBFD1-205ENST00000566136 COL3A1P02461 1466 aaPredicted RBP12.74□□□□□ -0.37
UBFD1-205ENST00000566136 ANKRD26Q9UPS8 1709 aa12.74□□□□□ -0.37
UBFD1-205ENST00000566136 SBNO1A3KN83 1393 aa12.74□□□□□ -0.37
UBFD1-205ENST00000566136 TEX19Q8NA77 164 aa12.74□□□□□ -0.37
UBFD1-205ENST00000566136 FBF1Q8TES7 1133 aa12.74□□□□□ -0.37
UBFD1-205ENST00000566136 IFT122Q9HBG6 1241 aa12.74□□□□□ -0.37
UBFD1-205ENST00000566136 ASAP1Q9ULH1 1129 aa12.74□□□□□ -0.37
UBFD1-205ENST00000566136 A6NHS1 94 aa12.73□□□□□ -0.37
UBFD1-205ENST00000566136 RHOBTB3O94955 611 aa12.73□□□□□ -0.37
UBFD1-205ENST00000566136 TNFAIP3P21580 790 aa12.73□□□□□ -0.37
UBFD1-205ENST00000566136 NUDT18Q6ZVK8 323 aa12.73□□□□□ -0.37
UBFD1-205ENST00000566136 NBPF11Q86T75 865 aa12.73□□□□□ -0.37
UBFD1-205ENST00000566136 MTMR8Q96EF0 704 aa12.73□□□□□ -0.37
UBFD1-205ENST00000566136 NOL7Q9UMY1 257 aaKnown RBP12.73□□□□□ -0.37
UBFD1-205ENST00000566136 RABGAP1Q9Y3P9 1069 aa12.73□□□□□ -0.37
UBFD1-205ENST00000566136 NUB1Q9Y5A7 615 aa12.73□□□□□ -0.37
UBFD1-205ENST00000566136 PTPN12Q05209 780 aaKnown RBP12.73□□□□□ -0.37
UBFD1-205ENST00000566136 ALKBH2Q6NS38 261 aa12.73□□□□□ -0.37
UBFD1-205ENST00000566136 STRA8Q7Z7C7 330 aa12.73□□□□□ -0.37
UBFD1-205ENST00000566136 PDCD7Q8N8D1 485 aaKnown RBP12.73□□□□□ -0.37
UBFD1-205ENST00000566136 PLEKHF1Q96S99 279 aa12.73□□□□□ -0.37
UBFD1-205ENST00000566136 TCEA3O75764 348 aa12.72□□□□□ -0.37
UBFD1-205ENST00000566136 APOBRQ0VD83 1088 aa12.72□□□□□ -0.37
UBFD1-205ENST00000566136 PDE3AQ14432 1141 aa12.72□□□□□ -0.37
UBFD1-205ENST00000566136 TRPM4Q8TD43 1214 aa12.72□□□□□ -0.37
UBFD1-205ENST00000566136 MAPK8IP3Q9UPT6 1336 aa12.72□□□□□ -0.37
UBFD1-205ENST00000566136 RLBP1P12271 317 aa12.72□□□□□ -0.37
UBFD1-205ENST00000566136 NPR3P17342 541 aa12.72□□□□□ -0.37
UBFD1-205ENST00000566136 HALP42357 657 aa12.72□□□□□ -0.37
UBFD1-205ENST00000566136 UNC5CLQ8IV45 518 aa12.72□□□□□ -0.37
UBFD1-205ENST00000566136 ADAMTS1Q9UHI8 967 aa12.72□□□□□ -0.37
UBFD1-205ENST00000566136 POLG2Q9UHN1 485 aa12.72□□□□□ -0.37
UBFD1-205ENST00000566136 KIF20BQ96Q89 1820 aa12.72□□□□□ -0.37
UBFD1-205ENST00000566136 SLIT2O94813 1529 aa12.71□□□□□ -0.37
UBFD1-205ENST00000566136 TMEM238LA0A1B0GVL6 79 aa12.71□□□□□ -0.37
UBFD1-205ENST00000566136 TMPOP42166 694 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms