RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 MED15Q96RN5 788 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 EHD4Q9H223 541 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 TPCN1Q9ULQ1 816 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 EBAG9O00559 213 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 EIF3HO15372 352 aaKnown RBP eCLIP3.29□□□□□ -1.882e-6■■■■■ 27
CHD9-218ENST00000566029 TPD52L2O43399 206 aaKnown RBP3.29□□□□□ -1.88
CHD9-218ENST00000566029 ATP5JP18859 108 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 ADCK5Q3MIX3 580 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 PSMA8Q8TAA3 256 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 AENQ8WTP8 325 aaKnown RBP3.29□□□□□ -1.88
CHD9-218ENST00000566029 C14orf93Q9H972 538 aaKnown RBP3.29□□□□□ -1.88
CHD9-218ENST00000566029 RIMS2Q9UQ26 1411 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 ARHGEF40Q8TER5 1519 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 FRMD3A2A2Y4 597 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 GNG11P61952 73 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 NAA25Q14CX7 972 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 TSHZ3Q63HK5 1081 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 ANKRD18AQ8IVF6 992 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 TMEM232C9JQI7 657 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 KARSQ15046 597 aaKnown RBP3.29□□□□□ -1.88
CHD9-218ENST00000566029 TOGARAM2Q6ZUX3 1019 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 RBM12BQ8IXT5 1001 aaKnown RBP3.29□□□□□ -1.88
CHD9-218ENST00000566029 TC2NQ8N9U0 490 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 ARMC2Q8NEN0 867 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 HOOK2Q96ED9 719 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 TRIM55Q9BYV6 548 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 ANAPC4Q9UJX5 808 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 BECN2A8MW95 431 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 CBFA2T2O43439 604 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 PFKFB2O60825 505 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 KINO60870 393 aaKnown RBP3.29□□□□□ -1.88
CHD9-218ENST00000566029 KIAA0754O94854 1291 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 HOXC6P09630 235 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 DNAJC14Q6Y2X3 702 aaPredicted RBP3.29□□□□□ -1.88
CHD9-218ENST00000566029 CPLX3Q8WVH0 158 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 SLX1AQ9BQ83 275 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 JPH2Q9BR39 696 aaPredicted RBP3.29□□□□□ -1.88
CHD9-218ENST00000566029 LRRCC1Q9C099 1032 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 ACTR5Q9H9F9 607 aaPredicted RBP3.29□□□□□ -1.88
CHD9-218ENST00000566029 IRAK4Q9NWZ3 460 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 CHD1O14646 1710 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 A0A1B0GVL5 298 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 ATP2C2O75185 946 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 AP1G2O75843 785 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 ZBTB17Q13105 803 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 PDCD2Q16342 344 aaPredicted RBP3.29□□□□□ -1.88
CHD9-218ENST00000566029 CCDC40Q4G0X9 1142 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 Q6ZUG5 572 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 FAM177A1Q8N128 213 aaPredicted RBP3.29□□□□□ -1.88
CHD9-218ENST00000566029 IGSF22Q8N9C0 903 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 CCDC102AQ96A19 550 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 TUBB1Q9H4B7 451 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 PLEKHA4Q9H4M7 779 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 TRPM2O94759 1503 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 MAP3K5Q99683 1374 aa3.29□□□□□ -1.88
CHD9-218ENST00000566029 ERICH2A1L162 156 aa3.28□□□□□ -1.88
CHD9-218ENST00000566029 ZSCAN9O15535 394 aaPredicted RBP3.28□□□□□ -1.88
CHD9-218ENST00000566029 SYF2O95926 243 aaKnown RBP3.28□□□□□ -1.88
CHD9-218ENST00000566029 GCLCP48506 637 aaPredicted RBP3.28□□□□□ -1.88
CHD9-218ENST00000566029 MYL5Q02045 173 aa3.28□□□□□ -1.88
CHD9-218ENST00000566029 PTH1RQ03431 593 aa3.28□□□□□ -1.88
CHD9-218ENST00000566029 POLA2Q14181 598 aa3.28□□□□□ -1.88
CHD9-218ENST00000566029 E2F5Q15329 346 aa3.28□□□□□ -1.88
CHD9-218ENST00000566029 ILDR1Q86SU0 546 aaPredicted RBP3.28□□□□□ -1.88
CHD9-218ENST00000566029 CADPS2Q86UW7 1296 aa3.28□□□□□ -1.88
CHD9-218ENST00000566029 CXorf38Q8TB03 319 aa3.28□□□□□ -1.88
CHD9-218ENST00000566029 OSBPL9Q96SU4 736 aa3.28□□□□□ -1.88
CHD9-218ENST00000566029 TERF2IPQ9NYB0 399 aa3.28□□□□□ -1.88
CHD9-218ENST00000566029 FAM184BQ9ULE4 1060 aa3.28□□□□□ -1.88
CHD9-218ENST00000566029 SEPT14Q6ZU15 432 aa3.28□□□□□ -1.88
CHD9-218ENST00000566029 AGPSO00116 658 aa3.28□□□□□ -1.88
CHD9-218ENST00000566029 STX10O60499 249 aa3.28□□□□□ -1.88
CHD9-218ENST00000566029 MECOMQ03112 1051 aa3.28□□□□□ -1.88
CHD9-218ENST00000566029 TAX1BP1Q86VP1 789 aa3.28□□□□□ -1.88
CHD9-218ENST00000566029 THOC1Q96FV9 657 aaKnown RBP3.28□□□□□ -1.88
CHD9-218ENST00000566029 JAKMIP1Q96N16 626 aaKnown RBP3.28□□□□□ -1.88
CHD9-218ENST00000566029 GGNBP2Q9H3C7 697 aa3.28□□□□□ -1.88
CHD9-218ENST00000566029 SLC39A2Q9NP94 309 aa3.28□□□□□ -1.88
CHD9-218ENST00000566029 KLC4Q9NSK0 619 aa3.28□□□□□ -1.88
CHD9-218ENST00000566029 UBAP1Q9NZ09 502 aa3.28□□□□□ -1.88
CHD9-218ENST00000566029 ATP10BO94823 1461 aa3.28□□□□□ -1.88
CHD9-218ENST00000566029 MAST1Q9Y2H9 1570 aa3.28□□□□□ -1.88
CHD9-218ENST00000566029 A0A1B0GUA9 196 aa3.28□□□□□ -1.88
CHD9-218ENST00000566029 TOB2Q14106 344 aaPredicted RBP3.28□□□□□ -1.88
CHD9-218ENST00000566029 NECTIN1Q15223 517 aa3.28□□□□□ -1.88
CHD9-218ENST00000566029 DPCR1Q3MIW9 517 aa3.28□□□□□ -1.88
CHD9-218ENST00000566029 CWF19L1Q69YN2 538 aaKnown RBP3.28□□□□□ -1.88
CHD9-218ENST00000566029 G2E3Q7L622 706 aa3.28□□□□□ -1.88
CHD9-218ENST00000566029 NSUN7Q8NE18 718 aaKnown RBP3.28□□□□□ -1.88
CHD9-218ENST00000566029 CAPS2Q9BXY5 557 aa3.28□□□□□ -1.88
CHD9-218ENST00000566029 IRX2Q9BZI1 471 aaPredicted RBP3.28□□□□□ -1.88
CHD9-218ENST00000566029 VCPKMTQ9H867 229 aa3.28□□□□□ -1.88
CHD9-218ENST00000566029 CORO1CQ9ULV4 474 aaPredicted RBP3.28□□□□□ -1.88
CHD9-218ENST00000566029 PIP4K2AP48426 406 aaPredicted RBP3.28□□□□□ -1.88
CHD9-218ENST00000566029 GOLGA8FQ08AF8 430 aa3.28□□□□□ -1.88
CHD9-218ENST00000566029 GOLGA8DPQ0D2H9 430 aa3.28□□□□□ -1.88
CHD9-218ENST00000566029 SLMAPQ14BN4 828 aa3.28□□□□□ -1.88
CHD9-218ENST00000566029 NBPF14Q5TI25 921 aa3.28□□□□□ -1.88
CHD9-218ENST00000566029 FAM76AQ8TAV0 307 aa3.28□□□□□ -1.88
CHD9-218ENST00000566029 SAMD9LQ8IVG5 1584 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms