RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 ZFPM1Q8IX07 1006 aa15.13■□□□□ 0.01
SF3B3-206ENST00000565990 RBM46Q8TBY0 533 aaKnown RBP15.13■□□□□ 0.01
SF3B3-206ENST00000565990 CRNKL1Q9BZJ0 848 aaKnown RBP15.13■□□□□ 0.01
SF3B3-206ENST00000565990 TMOD2Q9NZR1 351 aa15.13■□□□□ 0.01
SF3B3-206ENST00000565990 CLEC11AQ9Y240 323 aa15.13■□□□□ 0.01
SF3B3-206ENST00000565990 PPP2R3BQ9Y5P8 575 aa15.13■□□□□ 0.01
SF3B3-206ENST00000565990 SLC4A4Q9Y6R1 1079 aa15.13■□□□□ 0.01
SF3B3-206ENST00000565990 RAD50Q92878 1312 aa15.13■□□□□ 0.01
SF3B3-206ENST00000565990 TCP10L2B9ZVM9 353 aa15.12■□□□□ 0.01
SF3B3-206ENST00000565990 FOXP2O15409 715 aa15.12■□□□□ 0.01
SF3B3-206ENST00000565990 SGSM2O43147 1006 aa15.12■□□□□ 0.01
SF3B3-206ENST00000565990 TNNI2P48788 182 aa15.12■□□□□ 0.01
SF3B3-206ENST00000565990 MFAP1P55081 439 aaKnown RBP15.12■□□□□ 0.01
SF3B3-206ENST00000565990 ALX1Q15699 326 aa15.12■□□□□ 0.01
SF3B3-206ENST00000565990 CCDC129Q6ZRS4 1044 aa15.12■□□□□ 0.01
SF3B3-206ENST00000565990 ZNF589Q86UQ0 364 aaPredicted RBP15.12■□□□□ 0.01
SF3B3-206ENST00000565990 VEZTQ9HBM0 779 aa15.12■□□□□ 0.01
SF3B3-206ENST00000565990 DCP1AQ9NPI6 582 aaPredicted RBP15.12■□□□□ 0.01
SF3B3-206ENST00000565990 BAZ2AQ9UIF9 1905 aaKnown RBP15.11■□□□□ 0.01
SF3B3-206ENST00000565990 HSPD1P10809 573 aaKnown RBP15.11■□□□□ 0.01
SF3B3-206ENST00000565990 MAP3K10Q02779 954 aa15.11■□□□□ 0.01
SF3B3-206ENST00000565990 SH3BP5LQ7L8J4 393 aa15.11■□□□□ 0.01
SF3B3-206ENST00000565990 KRT26Q7Z3Y9 468 aa15.11■□□□□ 0.01
SF3B3-206ENST00000565990 USP48Q86UV5 1035 aa15.11■□□□□ 0.01
SF3B3-206ENST00000565990 METTL16Q86W50 562 aaKnown RBP15.11■□□□□ 0.01
SF3B3-206ENST00000565990 SULF1Q8IWU6 871 aa15.11■□□□□ 0.01
SF3B3-206ENST00000565990 ESYT1Q9BSJ8 1104 aa15.11■□□□□ 0.01
SF3B3-206ENST00000565990 OSBPL5Q9H0X9 879 aaPredicted RBP15.11■□□□□ 0.01
SF3B3-206ENST00000565990 SCAF8Q9UPN6 1271 aaKnown RBP15.11■□□□□ 0.01
SF3B3-206ENST00000565990 COL2A1P02458 1487 aaPredicted RBP15.11■□□□□ 0.01
SF3B3-206ENST00000565990 CCDC171Q6TFL3 1326 aa15.11■□□□□ 0.01
SF3B3-206ENST00000565990 ATRNL1Q5VV63 1379 aa15.11■□□□□ 0.01
SF3B3-206ENST00000565990 USP5P45974 858 aa15.1■□□□□ 0.01
SF3B3-206ENST00000565990 TCP10Q12799 353 aa15.1■□□□□ 0.01
SF3B3-206ENST00000565990 SBK1Q52WX2 424 aa15.1■□□□□ 0.01
SF3B3-206ENST00000565990 IFNL3Q8IZI9 196 aa15.1■□□□□ 0.01
SF3B3-206ENST00000565990 SDR42E1Q8WUS8 393 aa15.1■□□□□ 0.01
SF3B3-206ENST00000565990 TMEM39BQ9GZU3 492 aa15.1■□□□□ 0.01
SF3B3-206ENST00000565990 DHX36Q9H2U1 1008 aaKnown RBP15.1■□□□□ 0.01
SF3B3-206ENST00000565990 FLT1P17948 1338 aa15.1■□□□□ 0.01
SF3B3-206ENST00000565990 DDTLA6NHG4 134 aaPredicted RBP15.09■□□□□ 0.01
SF3B3-206ENST00000565990 VPS53Q5VIR6 699 aa15.09■□□□□ 0.01
SF3B3-206ENST00000565990 CASC1Q6TDU7 716 aa15.09■□□□□ 0.01
SF3B3-206ENST00000565990 MAPKAPK5Q8IW41 473 aa15.09■□□□□ 0.01
SF3B3-206ENST00000565990 SMC1BQ8NDV3 1235 aa15.09■□□□□ 0.01
SF3B3-206ENST00000565990 DSCC1Q9BVC3 393 aa15.09■□□□□ 0.01
SF3B3-206ENST00000565990 GLIS2Q9BZE0 524 aaPredicted RBP15.09■□□□□ 0.01
SF3B3-206ENST00000565990 TRPM7Q96QT4 1865 aa15.09■□□□□ 0.01
SF3B3-206ENST00000565990 DDX60LQ5H9U9 1706 aaKnown RBP15.09■□□□□ 0.01
SF3B3-206ENST00000565990 ADM5C9JUS6 153 aa15.08■□□□□ 0
SF3B3-206ENST00000565990 TBC1D12O60347 775 aa15.08■□□□□ 0
SF3B3-206ENST00000565990 FGAP02671 866 aa15.08■□□□□ 0
SF3B3-206ENST00000565990 FSTL1Q12841 308 aa15.08■□□□□ 0
SF3B3-206ENST00000565990 PICALMQ13492 652 aa15.08■□□□□ 0
SF3B3-206ENST00000565990 SUPT20HL1Q3ZLR7 823 aa15.08■□□□□ 0
SF3B3-206ENST00000565990 NBPF12Q5TAG4 269 aaPredicted RBP15.08■□□□□ 0
SF3B3-206ENST00000565990 CTR9Q6PD62 1173 aa15.08■□□□□ 0
SF3B3-206ENST00000565990 DLK2Q6UY11 383 aa15.08■□□□□ 0
SF3B3-206ENST00000565990 FOXP4Q8IVH2 680 aaPredicted RBP15.08■□□□□ 0
SF3B3-206ENST00000565990 MAP4K1Q92918 833 aa15.08■□□□□ 0
SF3B3-206ENST00000565990 NACAP1Q9BZK3 213 aa15.08■□□□□ 0
SF3B3-206ENST00000565990 PI4KBQ9UBF8 816 aa15.08■□□□□ 0
SF3B3-206ENST00000565990 TAOK2Q9UL54 1235 aa15.08■□□□□ 0
SF3B3-206ENST00000565990 PASKQ96RG2 1323 aa15.08■□□□□ 0
SF3B3-206ENST00000565990 NAV1Q8NEY1 1877 aa15.08■□□□□ 0
SF3B3-206ENST00000565990 USP17L12C9JPN9 530 aa15.07■□□□□ 0
SF3B3-206ENST00000565990 USP17L21D6R901 530 aa15.07■□□□□ 0
SF3B3-206ENST00000565990 C8orf34Q49A92 452 aa15.07■□□□□ 0
SF3B3-206ENST00000565990 C12orf60Q5U649 245 aa15.07■□□□□ 0
SF3B3-206ENST00000565990 PRAMEF18Q5VWM3 479 aa15.07■□□□□ 0
SF3B3-206ENST00000565990 CDAN1Q8IWY9 1227 aa15.07■□□□□ 0
SF3B3-206ENST00000565990 CDCA5Q96FF9 252 aa15.07■□□□□ 0
SF3B3-206ENST00000565990 EPB41L4AQ9HCS5 686 aaPredicted RBP15.07■□□□□ 0
SF3B3-206ENST00000565990 PALD1Q9ULE6 856 aa15.07■□□□□ 0
SF3B3-206ENST00000565990 SIPA1L1O43166 1804 aa15.07■□□□□ 0
SF3B3-206ENST00000565990 ZMYM6O95789 1325 aa15.07■□□□□ 0
SF3B3-206ENST00000565990 APPP05067 770 aa15.06■□□□□ 0
SF3B3-206ENST00000565990 PLCD1P51178 756 aa15.06■□□□□ 0
SF3B3-206ENST00000565990 PTH1RQ03431 593 aa15.06■□□□□ 0
SF3B3-206ENST00000565990 TTC6Q86TZ1 520 aa15.06■□□□□ 0
SF3B3-206ENST00000565990 LSG1Q9H089 658 aaKnown RBP15.06■□□□□ 0
SF3B3-206ENST00000565990 EHD4Q9H223 541 aa15.06■□□□□ 0
SF3B3-206ENST00000565990 MCM9Q9NXL9 1143 aa15.06■□□□□ 0
SF3B3-206ENST00000565990 TRAF5O00463 557 aa15.05■□□□□ -0
SF3B3-206ENST00000565990 EPB41L2O43491 1005 aaKnown RBP15.05■□□□□ -0
SF3B3-206ENST00000565990 DEKP35659 375 aaKnown RBP15.05■□□□□ -0
SF3B3-206ENST00000565990 GABPAQ06546 454 aa15.05■□□□□ -0
SF3B3-206ENST00000565990 CST9Q5W186 159 aa15.05■□□□□ -0
SF3B3-206ENST00000565990 HOOK2Q96ED9 719 aa15.05■□□□□ -0
SF3B3-206ENST00000565990 ARPP21Q9UBL0 812 aaPredicted RBP15.05■□□□□ -0
SF3B3-206ENST00000565990 SAP30BPQ9UHR5 308 aaKnown RBP15.05■□□□□ -0
SF3B3-206ENST00000565990 ANAPC4Q9UJX5 808 aa15.05■□□□□ -0
SF3B3-206ENST00000565990 POLR3DP05423 398 aaPredicted RBP15.04■□□□□ -0
SF3B3-206ENST00000565990 FMR1Q06787 632 aaKnown RBP eCLIP15.04■□□□□ -05e-8■■□□□ 13
SF3B3-206ENST00000565990 MAP3K11Q16584 847 aa15.04■□□□□ -0
SF3B3-206ENST00000565990 ZSCAN29Q8IWY8 852 aaPredicted RBP15.04■□□□□ -0
SF3B3-206ENST00000565990 CSRNP1Q96S65 589 aa15.04■□□□□ -0
SF3B3-206ENST00000565990 NAPBQ9H115 298 aa15.04■□□□□ -0
SF3B3-206ENST00000565990 CTNNA3Q9UI47 895 aa15.04■□□□□ -0
SF3B3-206ENST00000565990 HERC5Q9UII4 1024 aaKnown RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms