RNA–Protein interactions for RNA: ENST00000565697.1

CNOT1-208, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 385 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-208ENST00000565697 KIF1BPQ96EK5 621 aa12.13□□□□□ -0.47
CNOT1-208ENST00000565697 SLC10A4Q96EP9 437 aa12.13□□□□□ -0.47
CNOT1-208ENST00000565697 TEPSINQ96N21 525 aa12.13□□□□□ -0.47
CNOT1-208ENST00000565697 DBNDD2Q9BQY9 259 aa12.13□□□□□ -0.47
CNOT1-208ENST00000565697 TMEM39BQ9GZU3 492 aa12.13□□□□□ -0.47
CNOT1-208ENST00000565697 USP40Q9NVE5 1235 aa12.13□□□□□ -0.47
CNOT1-208ENST00000565697 RPAP1Q9BWH6 1393 aaPredicted RBP12.13□□□□□ -0.47
CNOT1-208ENST00000565697 GAKO14976 1311 aa12.12□□□□□ -0.47
CNOT1-208ENST00000565697 USP2O75604 605 aaPredicted RBP12.12□□□□□ -0.47
CNOT1-208ENST00000565697 MAP4K4O95819 1239 aaPredicted RBP12.12□□□□□ -0.47
CNOT1-208ENST00000565697 HSPA8P11142 646 aaKnown RBP12.12□□□□□ -0.47
CNOT1-208ENST00000565697 LBX1P52954 281 aa12.12□□□□□ -0.47
CNOT1-208ENST00000565697 CACNB3P54284 484 aa12.12□□□□□ -0.47
CNOT1-208ENST00000565697 C20orf194Q5TEA3 1177 aa12.12□□□□□ -0.47
CNOT1-208ENST00000565697 DCAF15Q66K64 600 aa12.12□□□□□ -0.47
CNOT1-208ENST00000565697 FAM151AQ8WW52 585 aa12.12□□□□□ -0.47
CNOT1-208ENST00000565697 EAF2Q96CJ1 260 aaPredicted RBP12.12□□□□□ -0.47
CNOT1-208ENST00000565697 ZIC5Q96T25 663 aa12.12□□□□□ -0.47
CNOT1-208ENST00000565697 CCDC8Q9H0W5 538 aaPredicted RBP12.12□□□□□ -0.47
CNOT1-208ENST00000565697 SAGE1Q9NXZ1 904 aa12.12□□□□□ -0.47
CNOT1-208ENST00000565697 RAI14Q9P0K7 980 aa12.12□□□□□ -0.47
CNOT1-208ENST00000565697 LRP2BPQ9P2M1 347 aa12.12□□□□□ -0.47
CNOT1-208ENST00000565697 MROH7-TTC4A0A0A0MT08 1334 aa12.11□□□□□ -0.47
CNOT1-208ENST00000565697 MYH2Q9UKX2 1941 aa12.11□□□□□ -0.47
CNOT1-208ENST00000565697 ZBTB48P10074 688 aaPredicted RBP12.11□□□□□ -0.47
CNOT1-208ENST00000565697 MECOMQ03112 1051 aa12.11□□□□□ -0.47
CNOT1-208ENST00000565697 SREBF2Q12772 1141 aa12.11□□□□□ -0.47
CNOT1-208ENST00000565697 COL13A1Q5TAT6 717 aaPredicted RBP12.11□□□□□ -0.47
CNOT1-208ENST00000565697 AACSQ86V21 672 aa12.11□□□□□ -0.47
CNOT1-208ENST00000565697 CSRNP1Q96S65 589 aa12.11□□□□□ -0.47
CNOT1-208ENST00000565697 NOL10Q9BSC4 688 aaKnown RBP12.11□□□□□ -0.47
CNOT1-208ENST00000565697 DBNLQ9UJU6 430 aaKnown RBP12.11□□□□□ -0.47
CNOT1-208ENST00000565697 SSC5DA1L4H1 1573 aa12.1□□□□□ -0.47
CNOT1-208ENST00000565697 GPR75-ASB3A0A0A6YYF3 556 aa12.1□□□□□ -0.47
CNOT1-208ENST00000565697 ENTPD3O75355 529 aa12.1□□□□□ -0.47
CNOT1-208ENST00000565697 IFIT2P09913 472 aaKnown RBP12.1□□□□□ -0.47
CNOT1-208ENST00000565697 BTDP43251 543 aa12.1□□□□□ -0.47
CNOT1-208ENST00000565697 RRP1P56182 461 aaKnown RBP12.1□□□□□ -0.47
CNOT1-208ENST00000565697 INHBEP58166 350 aa12.1□□□□□ -0.47
CNOT1-208ENST00000565697 MAP3K9P80192 1104 aa12.1□□□□□ -0.47
CNOT1-208ENST00000565697 SPRYD7Q5W111 196 aa12.1□□□□□ -0.47
CNOT1-208ENST00000565697 TMED8Q6PL24 325 aaPredicted RBP12.1□□□□□ -0.47
CNOT1-208ENST00000565697 PI16Q6UXB8 463 aa12.1□□□□□ -0.47
CNOT1-208ENST00000565697 TBC1D9Q6ZT07 1266 aa12.1□□□□□ -0.47
CNOT1-208ENST00000565697 SIRT2Q8IXJ6 389 aa12.1□□□□□ -0.47
CNOT1-208ENST00000565697 NSUN4Q96CB9 384 aaKnown RBP12.1□□□□□ -0.47
CNOT1-208ENST00000565697 IDI2Q9BXS1 227 aa12.1□□□□□ -0.47
CNOT1-208ENST00000565697 FZD1Q9UP38 647 aa12.1□□□□□ -0.47
CNOT1-208ENST00000565697 CSADQ9Y600 493 aa12.1□□□□□ -0.47
CNOT1-208ENST00000565697 AKAP11Q9UKA4 1901 aa12.09□□□□□ -0.47
CNOT1-208ENST00000565697 MANSC4A6NHS7 340 aaPredicted RBP12.09□□□□□ -0.47
CNOT1-208ENST00000565697 BAG3O95817 575 aa12.09□□□□□ -0.47
CNOT1-208ENST00000565697 TM4SF4P48230 202 aa12.09□□□□□ -0.47
CNOT1-208ENST00000565697 NAA16Q6N069 864 aaPredicted RBP12.09□□□□□ -0.47
CNOT1-208ENST00000565697 TNS4Q8IZW8 715 aa12.09□□□□□ -0.47
CNOT1-208ENST00000565697 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.09□□□□□ -0.47
CNOT1-208ENST00000565697 WNK4Q96J92 1243 aa12.09□□□□□ -0.47
CNOT1-208ENST00000565697 ZNF341Q9BYN7 854 aa12.09□□□□□ -0.47
CNOT1-208ENST00000565697 IL1RAPL2Q9NP60 686 aa12.09□□□□□ -0.47
CNOT1-208ENST00000565697 SNRKQ9NRH2 765 aa12.09□□□□□ -0.47
CNOT1-208ENST00000565697 RNF186Q9NXI6 227 aa12.09□□□□□ -0.47
CNOT1-208ENST00000565697 APBB1O00213 710 aa12.08□□□□□ -0.48
CNOT1-208ENST00000565697 TRPA1O75762 1119 aa12.08□□□□□ -0.48
CNOT1-208ENST00000565697 ALDH1A1P00352 501 aa12.08□□□□□ -0.48
CNOT1-208ENST00000565697 CYP2E1P05181 493 aaPredicted RBP12.08□□□□□ -0.48
CNOT1-208ENST00000565697 PYGBP11216 843 aa12.08□□□□□ -0.48
CNOT1-208ENST00000565697 ZAP70P43403 619 aa12.08□□□□□ -0.48
CNOT1-208ENST00000565697 TCP10Q12799 353 aa12.08□□□□□ -0.48
CNOT1-208ENST00000565697 NFIAQ12857 509 aa12.08□□□□□ -0.48
CNOT1-208ENST00000565697 MKRN3Q13064 507 aaKnown RBP12.08□□□□□ -0.48
CNOT1-208ENST00000565697 TTF1Q15361 905 aaPredicted RBP12.08□□□□□ -0.48
CNOT1-208ENST00000565697 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.08□□□□□ -0.48
CNOT1-208ENST00000565697 TLR7Q9NYK1 1049 aaKnown RBP12.08□□□□□ -0.48
CNOT1-208ENST00000565697 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.08□□□□□ -0.48
CNOT1-208ENST00000565697 FAM198AQ9UFP1 575 aa12.08□□□□□ -0.48
CNOT1-208ENST00000565697 AK9Q5TCS8 1911 aa12.07□□□□□ -0.48
CNOT1-208ENST00000565697 RGS3P49796 1198 aa12.07□□□□□ -0.48
CNOT1-208ENST00000565697 OTUD7BQ6GQQ9 843 aa12.07□□□□□ -0.48
CNOT1-208ENST00000565697 CERS3Q8IU89 383 aa12.07□□□□□ -0.48
CNOT1-208ENST00000565697 ZSCAN29Q8IWY8 852 aaPredicted RBP12.07□□□□□ -0.48
CNOT1-208ENST00000565697 PDCD7Q8N8D1 485 aaKnown RBP12.07□□□□□ -0.48
CNOT1-208ENST00000565697 CLMNQ96JQ2 1002 aa12.07□□□□□ -0.48
CNOT1-208ENST00000565697 WRNIP1Q96S55 665 aa12.07□□□□□ -0.48
CNOT1-208ENST00000565697 LRRCC1Q9C099 1032 aa12.07□□□□□ -0.48
CNOT1-208ENST00000565697 ELP3Q9H9T3 547 aa12.07□□□□□ -0.48
CNOT1-208ENST00000565697 TSKSQ9UJT2 592 aa12.07□□□□□ -0.48
CNOT1-208ENST00000565697 WDHD1O75717 1129 aaPredicted RBP12.06□□□□□ -0.48
CNOT1-208ENST00000565697 RHBDL3P58872 404 aa12.06□□□□□ -0.48
CNOT1-208ENST00000565697 MAP3K12Q12852 859 aa12.06□□□□□ -0.48
CNOT1-208ENST00000565697 VGLL4Q14135 290 aa12.06□□□□□ -0.48
CNOT1-208ENST00000565697 IFFO2Q5TF58 517 aa12.06□□□□□ -0.48
CNOT1-208ENST00000565697 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.06□□□□□ -0.48
CNOT1-208ENST00000565697 MIGA2Q7L4E1 593 aa12.06□□□□□ -0.48
CNOT1-208ENST00000565697 OPTNQ96CV9 577 aa12.06□□□□□ -0.48
CNOT1-208ENST00000565697 PCDHB8Q9UN66 801 aa12.06□□□□□ -0.48
CNOT1-208ENST00000565697 MAST2Q6P0Q8 1798 aa12.05□□□□□ -0.48
CNOT1-208ENST00000565697 IDH1O75874 414 aaKnown RBP12.05□□□□□ -0.48
CNOT1-208ENST00000565697 GTF2A2P52657 109 aa12.05□□□□□ -0.48
CNOT1-208ENST00000565697 PPP4CP60510 307 aa12.05□□□□□ -0.48
CNOT1-208ENST00000565697 PICALMQ13492 652 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms