RNA–Protein interactions for RNA: ENST00000565602.5

EDC3-208, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 5

Gene EDC3, Length 1,862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-208ENST00000565602 BTDP43251 543 aa21.85■■□□□ 1.09
EDC3-208ENST00000565602 DPF2Q92785 391 aa21.85■■□□□ 1.09
EDC3-208ENST00000565602 ZDHHC15Q96MV8 337 aa21.85■■□□□ 1.09
EDC3-208ENST00000565602 CTNNA3Q9UI47 895 aa21.85■■□□□ 1.09
EDC3-208ENST00000565602 DDX60LQ5H9U9 1706 aaKnown RBP21.84■■□□□ 1.09
EDC3-208ENST00000565602 HMGB1P09429 215 aaKnown RBP21.84■■□□□ 1.09
EDC3-208ENST00000565602 APOBEC3HQ6NTF7 200 aaKnown RBP21.84■■□□□ 1.09
EDC3-208ENST00000565602 STOX1Q6ZVD7 989 aa21.84■■□□□ 1.09
EDC3-208ENST00000565602 TCEANC2Q96MN5 208 aa21.84■■□□□ 1.09
EDC3-208ENST00000565602 NAV1Q8NEY1 1877 aa21.84■■□□□ 1.09
EDC3-208ENST00000565602 GOLGA6L22H0YM25 854 aa21.83■■□□□ 1.09
EDC3-208ENST00000565602 DDNO94850 711 aaPredicted RBP21.83■■□□□ 1.09
EDC3-208ENST00000565602 RHBDL3P58872 404 aa21.83■■□□□ 1.09
EDC3-208ENST00000565602 ZNF280AP59817 542 aaPredicted RBP21.83■■□□□ 1.09
EDC3-208ENST00000565602 TOB2Q14106 344 aaPredicted RBP21.83■■□□□ 1.09
EDC3-208ENST00000565602 GSE1Q14687 1217 aa21.83■■□□□ 1.09
EDC3-208ENST00000565602 TPCN1Q9ULQ1 816 aa21.83■■□□□ 1.09
EDC3-208ENST00000565602 BRD1O95696 1058 aa21.83■■□□□ 1.08
EDC3-208ENST00000565602 ME3Q16798 604 aa21.83■■□□□ 1.08
EDC3-208ENST00000565602 CFAP100Q494V2 611 aa21.83■■□□□ 1.08
EDC3-208ENST00000565602 CCDC83Q8IWF9 413 aa21.83■■□□□ 1.08
EDC3-208ENST00000565602 PRKAB2O43741 272 aa21.82■■□□□ 1.08
EDC3-208ENST00000565602 SH3RF3Q8TEJ3 882 aaPredicted RBP21.82■■□□□ 1.08
EDC3-208ENST00000565602 OGFOD1Q8N543 542 aa21.81■■□□□ 1.08
EDC3-208ENST00000565602 ZBED3Q96IU2 234 aaPredicted RBP21.81■■□□□ 1.08
EDC3-208ENST00000565602 HDAC9Q9UKV0 1011 aa21.81■■□□□ 1.08
EDC3-208ENST00000565602 SMC3Q9UQE7 1217 aa21.81■■□□□ 1.08
EDC3-208ENST00000565602 E7EWF7 191 aa21.81■■□□□ 1.08
EDC3-208ENST00000565602 TRAK2O60296 914 aa21.81■■□□□ 1.08
EDC3-208ENST00000565602 BAG3O95817 575 aa21.81■■□□□ 1.08
EDC3-208ENST00000565602 ST3GAL1Q11201 340 aa21.81■■□□□ 1.08
EDC3-208ENST00000565602 MICALL2Q8IY33 904 aa21.81■■□□□ 1.08
EDC3-208ENST00000565602 MTMR14Q8NCE2 650 aa21.81■■□□□ 1.08
EDC3-208ENST00000565602 EPB41L4AQ9HCS5 686 aaPredicted RBP21.81■■□□□ 1.08
EDC3-208ENST00000565602 CNOT7Q9UIV1 285 aaKnown RBP21.81■■□□□ 1.08
EDC3-208ENST00000565602 LAMB1P07942 1786 aa21.8■■□□□ 1.08
EDC3-208ENST00000565602 GSG1L2A8MUP6 293 aa21.8■■□□□ 1.08
EDC3-208ENST00000565602 EGFRP00533 1210 aa21.8■■□□□ 1.08
EDC3-208ENST00000565602 IMMTQ16891 758 aaKnown RBP21.8■■□□□ 1.08
EDC3-208ENST00000565602 PRMT6Q96LA8 375 aaPredicted RBP21.8■■□□□ 1.08
EDC3-208ENST00000565602 GPRC5DQ9NZD1 345 aa21.8■■□□□ 1.08
EDC3-208ENST00000565602 MYH1P12882 1939 aa21.8■■□□□ 1.08
EDC3-208ENST00000565602 SPDYE2BA6NHP3 402 aa21.79■■□□□ 1.08
EDC3-208ENST00000565602 SPDYE6P0CI01 402 aa21.79■■□□□ 1.08
EDC3-208ENST00000565602 MMP14P50281 582 aa21.79■■□□□ 1.08
EDC3-208ENST00000565602 CDC42EP5Q6NZY7 148 aa21.79■■□□□ 1.08
EDC3-208ENST00000565602 SDR42E1Q8WUS8 393 aa21.79■■□□□ 1.08
EDC3-208ENST00000565602 MYOZ2Q9NPC6 264 aa21.79■■□□□ 1.08
EDC3-208ENST00000565602 SLC4A4Q9Y6R1 1079 aa21.79■■□□□ 1.08
EDC3-208ENST00000565602 WDR90Q96KV7 1748 aa21.79■■□□□ 1.08
EDC3-208ENST00000565602 WDR33Q9C0J8 1336 aaKnown RBP21.79■■□□□ 1.08
EDC3-208ENST00000565602 GNAT2P19087 354 aa21.79■■□□□ 1.08
EDC3-208ENST00000565602 RBM5P52756 815 aaKnown RBP eCLIP21.79■■□□□ 1.08
EDC3-208ENST00000565602 Q6ZUG5 572 aa21.79■■□□□ 1.08
EDC3-208ENST00000565602 DHX32Q7L7V1 743 aaKnown RBP21.79■■□□□ 1.08
EDC3-208ENST00000565602 NOL10Q9BSC4 688 aaKnown RBP21.79■■□□□ 1.08
EDC3-208ENST00000565602 SCN4AP35499 1836 aa21.79■■□□□ 1.08
EDC3-208ENST00000565602 PATL2C9JE40 543 aaKnown RBP21.78■■□□□ 1.08
EDC3-208ENST00000565602 FGAP02671 866 aa21.78■■□□□ 1.08
EDC3-208ENST00000565602 CERS3Q8IU89 383 aa21.78■■□□□ 1.08
EDC3-208ENST00000565602 NECAB1Q8N987 351 aa21.77■■□□□ 1.08
EDC3-208ENST00000565602 CRNKL1Q9BZJ0 848 aaKnown RBP21.77■■□□□ 1.08
EDC3-208ENST00000565602 MKRN1Q9UHC7 482 aaKnown RBP21.77■■□□□ 1.08
EDC3-208ENST00000565602 GLTPD2A6NH11 291 aa21.77■■□□□ 1.08
EDC3-208ENST00000565602 WDHD1O75717 1129 aaPredicted RBP21.77■■□□□ 1.08
EDC3-208ENST00000565602 PLCG2P16885 1265 aa21.77■■□□□ 1.08
EDC3-208ENST00000565602 DLGAP5Q15398 846 aa21.77■■□□□ 1.08
EDC3-208ENST00000565602 MCTP1Q6DN14 999 aa21.77■■□□□ 1.08
EDC3-208ENST00000565602 SAMD7Q7Z3H4 446 aa21.77■■□□□ 1.08
EDC3-208ENST00000565602 L3MBTL3Q96JM7 780 aaPredicted RBP21.77■■□□□ 1.08
EDC3-208ENST00000565602 USP40Q9NVE5 1235 aa21.77■■□□□ 1.08
EDC3-208ENST00000565602 TCHHQ07283 1943 aa21.76■■□□□ 1.07
EDC3-208ENST00000565602 WNT10BO00744 389 aa21.76■■□□□ 1.07
EDC3-208ENST00000565602 GJB2P29033 226 aa21.76■■□□□ 1.07
EDC3-208ENST00000565602 EPS15P42566 896 aa21.76■■□□□ 1.07
EDC3-208ENST00000565602 EXOSC10Q01780 885 aaKnown RBP21.76■■□□□ 1.07
EDC3-208ENST00000565602 SKOR2Q2VWA4 1001 aaPredicted RBP21.76■■□□□ 1.07
EDC3-208ENST00000565602 DPY19L2Q6NUT2 758 aa21.76■■□□□ 1.07
EDC3-208ENST00000565602 TEX11Q8IYF3 940 aa21.76■■□□□ 1.07
EDC3-208ENST00000565602 IFNL3Q8IZI9 196 aa21.76■■□□□ 1.07
EDC3-208ENST00000565602 TDRD3Q9H7E2 651 aaKnown RBP21.76■■□□□ 1.07
EDC3-208ENST00000565602 ZMYM6O95789 1325 aa21.76■■□□□ 1.07
EDC3-208ENST00000565602 DCAF8L1A6NGE4 600 aa21.75■■□□□ 1.07
EDC3-208ENST00000565602 HAND2P61296 217 aa21.75■■□□□ 1.07
EDC3-208ENST00000565602 ALX1Q15699 326 aa21.75■■□□□ 1.07
EDC3-208ENST00000565602 NBPF9Q3BBW0 867 aa21.75■■□□□ 1.07
EDC3-208ENST00000565602 FOXD4L5Q5VV16 416 aaPredicted RBP21.75■■□□□ 1.07
EDC3-208ENST00000565602 FOXD4L4Q8WXT5 416 aaPredicted RBP21.75■■□□□ 1.07
EDC3-208ENST00000565602 DCP1AQ9NPI6 582 aaPredicted RBP21.75■■□□□ 1.07
EDC3-208ENST00000565602 FGD1P98174 961 aa21.75■■□□□ 1.07
EDC3-208ENST00000565602 TBC1D10BQ4KMP7 808 aaPredicted RBP21.75■■□□□ 1.07
EDC3-208ENST00000565602 TGFBRAP1Q8WUH2 860 aa21.75■■□□□ 1.07
EDC3-208ENST00000565602 DDX4Q9NQI0 724 aaKnown RBP21.75■■□□□ 1.07
EDC3-208ENST00000565602 ZNF213O14771 459 aa21.74■■□□□ 1.07
EDC3-208ENST00000565602 NFIAQ12857 509 aa21.74■■□□□ 1.07
EDC3-208ENST00000565602 TRPM4Q8TD43 1214 aa21.74■■□□□ 1.07
EDC3-208ENST00000565602 BRF1Q92994 677 aa21.74■■□□□ 1.07
EDC3-208ENST00000565602 AGXT2Q9BYV1 514 aa21.74■■□□□ 1.07
EDC3-208ENST00000565602 ATP8A2Q9NTI2 1148 aa21.74■■□□□ 1.07
EDC3-208ENST00000565602 SIPA1L1O43166 1804 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms