RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 TNNI3KQ59H18 835 aa7.87□□□□□ -1.15
TCF4-228ENST00000565393 GADL1Q6ZQY3 521 aa7.87□□□□□ -1.15
TCF4-228ENST00000565393 SH3BP5LQ7L8J4 393 aa7.87□□□□□ -1.15
TCF4-228ENST00000565393 FASTKD5Q7L8L6 764 aaKnown RBP7.87□□□□□ -1.15
TCF4-228ENST00000565393 ANKRD23Q86SG2 305 aa7.87□□□□□ -1.15
TCF4-228ENST00000565393 SSH3Q8TE77 659 aa7.87□□□□□ -1.15
TCF4-228ENST00000565393 NSUN4Q96CB9 384 aaKnown RBP7.87□□□□□ -1.15
TCF4-228ENST00000565393 DBNDD2Q9BQY9 259 aa7.87□□□□□ -1.15
TCF4-228ENST00000565393 TMEM106CQ9BVX2 250 aa7.87□□□□□ -1.15
TCF4-228ENST00000565393 CCDC8Q9H0W5 538 aaPredicted RBP7.87□□□□□ -1.15
TCF4-228ENST00000565393 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.87□□□□□ -1.15
TCF4-228ENST00000565393 GPR108Q9NPR9 543 aa7.87□□□□□ -1.15
TCF4-228ENST00000565393 DDX4Q9NQI0 724 aaKnown RBP7.87□□□□□ -1.15
TCF4-228ENST00000565393 FPGT-TNNI3KV9GXZ4 949 aa7.87□□□□□ -1.15
TCF4-228ENST00000565393 PSME4Q14997 1843 aa7.87□□□□□ -1.15
TCF4-228ENST00000565393 GAKO14976 1311 aa7.86□□□□□ -1.15
TCF4-228ENST00000565393 PHF20L1A8MW92 1017 aa7.86□□□□□ -1.15
TCF4-228ENST00000565393 SLURP2P0DP57 97 aa7.86□□□□□ -1.15
TCF4-228ENST00000565393 MS4A1P11836 297 aa7.86□□□□□ -1.15
TCF4-228ENST00000565393 RLBP1P12271 317 aa7.86□□□□□ -1.15
TCF4-228ENST00000565393 PTPRAP18433 802 aa7.86□□□□□ -1.15
TCF4-228ENST00000565393 HOXD10P28358 340 aa7.86□□□□□ -1.15
TCF4-228ENST00000565393 ARID4AP29374 1257 aaPredicted RBP7.86□□□□□ -1.15
TCF4-228ENST00000565393 MCAMP43121 646 aa7.86□□□□□ -1.15
TCF4-228ENST00000565393 ZAP70P43403 619 aa7.86□□□□□ -1.15
TCF4-228ENST00000565393 RHBDL3P58872 404 aa7.86□□□□□ -1.15
TCF4-228ENST00000565393 SLC4A8Q2Y0W8 1093 aa7.86□□□□□ -1.15
TCF4-228ENST00000565393 NOL9Q5SY16 702 aaKnown RBP7.86□□□□□ -1.15
TCF4-228ENST00000565393 NAA16Q6N069 864 aaPredicted RBP7.86□□□□□ -1.15
TCF4-228ENST00000565393 TEX11Q8IYF3 940 aa7.86□□□□□ -1.15
TCF4-228ENST00000565393 SCYL3Q8IZE3 742 aa7.86□□□□□ -1.15
TCF4-228ENST00000565393 PANK1Q8TE04 598 aa7.86□□□□□ -1.15
TCF4-228ENST00000565393 ZCCHC17Q9NP64 241 aaKnown RBP7.86□□□□□ -1.15
TCF4-228ENST00000565393 KCNH4Q9UQ05 1017 aa7.86□□□□□ -1.15
TCF4-228ENST00000565393 CASP8AP2Q9UKL3 1982 aa7.86□□□□□ -1.15
TCF4-228ENST00000565393 POTEFA5A3E0 1075 aa7.85□□□□□ -1.15
TCF4-228ENST00000565393 TRIM75PA6NK02 468 aa7.85□□□□□ -1.15
TCF4-228ENST00000565393 APBB1O00213 710 aa7.85□□□□□ -1.15
TCF4-228ENST00000565393 TBC1D12O60347 775 aa7.85□□□□□ -1.15
TCF4-228ENST00000565393 MAP4K4O95819 1239 aaPredicted RBP7.85□□□□□ -1.15
TCF4-228ENST00000565393 CYP2C8P10632 490 aa7.85□□□□□ -1.15
TCF4-228ENST00000565393 EN2P19622 333 aaPredicted RBP7.85□□□□□ -1.15
TCF4-228ENST00000565393 PSMC4P43686 418 aa7.85□□□□□ -1.15
TCF4-228ENST00000565393 LACTBP83111 547 aaPredicted RBP7.85□□□□□ -1.15
TCF4-228ENST00000565393 CAP1Q01518 475 aa7.85□□□□□ -1.15
TCF4-228ENST00000565393 SLC9C1Q4G0N8 1177 aa7.85□□□□□ -1.15
TCF4-228ENST00000565393 C17orf99Q6UX52 265 aa7.85□□□□□ -1.15
TCF4-228ENST00000565393 SH3RF3Q8TEJ3 882 aaPredicted RBP7.85□□□□□ -1.15
TCF4-228ENST00000565393 ZNF384Q8TF68 577 aa7.85□□□□□ -1.15
TCF4-228ENST00000565393 TGFBRAP1Q8WUH2 860 aa7.85□□□□□ -1.15
TCF4-228ENST00000565393 TRIM34Q9BYJ4 488 aa7.85□□□□□ -1.15
TCF4-228ENST00000565393 ARHGAP39Q9C0H5 1083 aa7.85□□□□□ -1.15
TCF4-228ENST00000565393 AATFQ9NY61 560 aaKnown RBP eCLIP7.85□□□□□ -1.15
TCF4-228ENST00000565393 BIN2Q9UBW5 565 aaPredicted RBP7.85□□□□□ -1.15
TCF4-228ENST00000565393 NOP58Q9Y2X3 529 aaKnown RBP7.85□□□□□ -1.15
TCF4-228ENST00000565393 AFG3L2Q9Y4W6 797 aa7.85□□□□□ -1.15
TCF4-228ENST00000565393 PTCH2Q9Y6C5 1203 aa7.85□□□□□ -1.15
TCF4-228ENST00000565393 RPAP1Q9BWH6 1393 aaPredicted RBP7.84□□□□□ -1.15
TCF4-228ENST00000565393 FAM196BA6NMK8 535 aa7.84□□□□□ -1.15
TCF4-228ENST00000565393 IDH1O75874 414 aaKnown RBP7.84□□□□□ -1.15
TCF4-228ENST00000565393 GNRH1P01148 92 aa7.84□□□□□ -1.15
TCF4-228ENST00000565393 CYP2E1P05181 493 aaPredicted RBP7.84□□□□□ -1.15
TCF4-228ENST00000565393 PLCG2P16885 1265 aa7.84□□□□□ -1.15
TCF4-228ENST00000565393 CYP7A1P22680 504 aa7.84□□□□□ -1.15
TCF4-228ENST00000565393 MAP3K10Q02779 954 aa7.84□□□□□ -1.15
TCF4-228ENST00000565393 HSP90AB4PQ58FF6 505 aa7.84□□□□□ -1.15
TCF4-228ENST00000565393 GPAT2Q6NUI2 795 aa7.84□□□□□ -1.15
TCF4-228ENST00000565393 CCDC84Q86UT8 332 aaPredicted RBP7.84□□□□□ -1.15
TCF4-228ENST00000565393 AACSQ86V21 672 aa7.84□□□□□ -1.15
TCF4-228ENST00000565393 ERC1Q8IUD2 1116 aa7.84□□□□□ -1.15
TCF4-228ENST00000565393 FOXP4Q8IVH2 680 aaPredicted RBP7.84□□□□□ -1.15
TCF4-228ENST00000565393 MAPKAPK5Q8IW41 473 aa7.84□□□□□ -1.15
TCF4-228ENST00000565393 CRACR2BQ8N4Y2 399 aaPredicted RBP7.84□□□□□ -1.15
TCF4-228ENST00000565393 RAET1EQ8TD07 263 aa7.84□□□□□ -1.15
TCF4-228ENST00000565393 SH3TC2Q8TF17 1288 aa7.84□□□□□ -1.15
TCF4-228ENST00000565393 EAF2Q96CJ1 260 aaPredicted RBP7.84□□□□□ -1.15
TCF4-228ENST00000565393 PARK7Q99497 189 aaKnown RBP7.84□□□□□ -1.15
TCF4-228ENST00000565393 OSBPL5Q9H0X9 879 aaPredicted RBP7.84□□□□□ -1.15
TCF4-228ENST00000565393 DHX36Q9H2U1 1008 aaKnown RBP7.84□□□□□ -1.15
TCF4-228ENST00000565393 PI4KBQ9UBF8 816 aa7.84□□□□□ -1.15
TCF4-228ENST00000565393 EXOC6BQ9Y2D4 811 aa7.84□□□□□ -1.15
TCF4-228ENST00000565393 ZNF646O15015 1829 aaPredicted RBP7.84□□□□□ -1.15
TCF4-228ENST00000565393 ZBED9Q6R2W3 1325 aa7.83□□□□□ -1.16
TCF4-228ENST00000565393 USP17L5A8MUK1 530 aa7.83□□□□□ -1.16
TCF4-228ENST00000565393 NPM3O75607 178 aaKnown RBP7.83□□□□□ -1.16
TCF4-228ENST00000565393 CAP2P40123 477 aa7.83□□□□□ -1.16
TCF4-228ENST00000565393 PRMT2P55345 433 aa7.83□□□□□ -1.16
TCF4-228ENST00000565393 FCGRTP55899 365 aa7.83□□□□□ -1.16
TCF4-228ENST00000565393 PPP4CP60510 307 aa7.83□□□□□ -1.16
TCF4-228ENST00000565393 DYNLL1P63167 89 aaKnown RBP7.83□□□□□ -1.16
TCF4-228ENST00000565393 SPP2Q13103 211 aa7.83□□□□□ -1.16
TCF4-228ENST00000565393 MOGSQ13724 837 aa7.83□□□□□ -1.16
TCF4-228ENST00000565393 CEP85Q6P2H3 762 aa7.83□□□□□ -1.16
TCF4-228ENST00000565393 RPAP2Q8IXW5 612 aaPredicted RBP7.83□□□□□ -1.16
TCF4-228ENST00000565393 SMCR8Q8TEV9 937 aaPredicted RBP7.83□□□□□ -1.16
TCF4-228ENST00000565393 ARMC5Q96C12 935 aa7.83□□□□□ -1.16
TCF4-228ENST00000565393 ZNF512BQ96KM6 892 aaPredicted RBP7.83□□□□□ -1.16
TCF4-228ENST00000565393 TRIM47Q96LD4 638 aa7.83□□□□□ -1.16
TCF4-228ENST00000565393 CHMP4BQ9H444 224 aaKnown RBP7.83□□□□□ -1.16
TCF4-228ENST00000565393 IL1RAPL2Q9NP60 686 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms