RNA–Protein interactions for RNA: ENST00000565160.5

BBS4-208, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 3

Gene BBS4, Length 681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-208ENST00000565160 GSK3AP49840 483 aa6.78□□□□□ -1.32
BBS4-208ENST00000565160 COL19A1Q14993 1142 aa6.78□□□□□ -1.32
BBS4-208ENST00000565160 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.78□□□□□ -1.32
BBS4-208ENST00000565160 CCNJLQ8IV13 435 aa6.78□□□□□ -1.32
BBS4-208ENST00000565160 DDX17Q92841 729 aaKnown RBP6.78□□□□□ -1.32
BBS4-208ENST00000565160 BHLHE41Q9C0J9 482 aaPredicted RBP6.78□□□□□ -1.32
BBS4-208ENST00000565160 ADAM19Q9H013 955 aa6.78□□□□□ -1.32
BBS4-208ENST00000565160 LIN7BQ9HAP6 207 aa6.78□□□□□ -1.32
BBS4-208ENST00000565160 SH2B1Q9NRF2 756 aaPredicted RBP6.78□□□□□ -1.32
BBS4-208ENST00000565160 NALCNQ8IZF0 1738 aa6.78□□□□□ -1.32
BBS4-208ENST00000565160 MYOM2P54296 1465 aa6.78□□□□□ -1.32
BBS4-208ENST00000565160 EFCAB6Q5THR3 1501 aa6.77□□□□□ -1.33
BBS4-208ENST00000565160 KIF3BO15066 747 aa6.77□□□□□ -1.33
BBS4-208ENST00000565160 GADD45BO75293 160 aaPredicted RBP6.77□□□□□ -1.33
BBS4-208ENST00000565160 EPHA1P21709 976 aa6.77□□□□□ -1.33
BBS4-208ENST00000565160 GRIA4P48058 902 aa6.77□□□□□ -1.33
BBS4-208ENST00000565160 GRM2Q14416 872 aa6.77□□□□□ -1.33
BBS4-208ENST00000565160 EAPPQ56P03 285 aaPredicted RBP6.77□□□□□ -1.33
BBS4-208ENST00000565160 TRAPPC3LQ5T215 181 aa6.77□□□□□ -1.33
BBS4-208ENST00000565160 WFDC8Q8IUA0 241 aa6.77□□□□□ -1.33
BBS4-208ENST00000565160 GLIS3Q8NEA6 775 aa6.77□□□□□ -1.33
BBS4-208ENST00000565160 LRRC59Q96AG4 307 aaKnown RBP6.77□□□□□ -1.33
BBS4-208ENST00000565160 EHD4Q9H223 541 aa6.77□□□□□ -1.33
BBS4-208ENST00000565160 ADGRB3O60242 1522 aa6.76□□□□□ -1.33
BBS4-208ENST00000565160 XRN1Q8IZH2 1706 aaKnown RBP6.76□□□□□ -1.33
BBS4-208ENST00000565160 A0A0A0MRY4 1105 aa6.76□□□□□ -1.33
BBS4-208ENST00000565160 PTPRAP18433 802 aa6.76□□□□□ -1.33
BBS4-208ENST00000565160 ERCC3P19447 782 aa6.76□□□□□ -1.33
BBS4-208ENST00000565160 CDC27P30260 824 aa6.76□□□□□ -1.33
BBS4-208ENST00000565160 SPRED3Q2MJR0 410 aa6.76□□□□□ -1.33
BBS4-208ENST00000565160 TXNDC11Q6PKC3 985 aa6.76□□□□□ -1.33
BBS4-208ENST00000565160 ASAP3Q8TDY4 903 aa6.76□□□□□ -1.33
BBS4-208ENST00000565160 FBF1Q8TES7 1133 aa6.76□□□□□ -1.33
BBS4-208ENST00000565160 MUC3BQ9H195 1237 aa6.76□□□□□ -1.33
BBS4-208ENST00000565160 SOX13Q9UN79 622 aa6.76□□□□□ -1.33
BBS4-208ENST00000565160 PLEKHH2Q8IVE3 1493 aa6.76□□□□□ -1.33
BBS4-208ENST00000565160 NRKQ7Z2Y5 1582 aa6.76□□□□□ -1.33
BBS4-208ENST00000565160 SLIT2O94813 1529 aa6.76□□□□□ -1.33
BBS4-208ENST00000565160 DCCP43146 1447 aa6.76□□□□□ -1.33
BBS4-208ENST00000565160 PLCH1Q4KWH8 1693 aa6.75□□□□□ -1.33
BBS4-208ENST00000565160 LINC01387J3KSC0 135 aa6.75□□□□□ -1.33
BBS4-208ENST00000565160 DEAF1O75398 565 aaPredicted RBP6.75□□□□□ -1.33
BBS4-208ENST00000565160 CDC25BP30305 580 aa6.75□□□□□ -1.33
BBS4-208ENST00000565160 ATP2B2Q01814 1243 aa6.75□□□□□ -1.33
BBS4-208ENST00000565160 ALG1LQ6GMV1 187 aa6.75□□□□□ -1.33
BBS4-208ENST00000565160 VN1R5Q7Z5H4 357 aa6.75□□□□□ -1.33
BBS4-208ENST00000565160 BCO2Q9BYV7 579 aa6.75□□□□□ -1.33
BBS4-208ENST00000565160 ABCB6Q9NP58 842 aa6.75□□□□□ -1.33
BBS4-208ENST00000565160 NLRP2Q9NX02 1062 aa6.75□□□□□ -1.33
BBS4-208ENST00000565160 CDK11AQ9UQ88 783 aaPredicted RBP6.75□□□□□ -1.33
BBS4-208ENST00000565160 NWD2Q9ULI1 1742 aa6.75□□□□□ -1.33
BBS4-208ENST00000565160 EIF2AK4Q9P2K8 1649 aaKnown RBP6.75□□□□□ -1.33
BBS4-208ENST00000565160 ZFYVE9O95405 1425 aa6.75□□□□□ -1.33
BBS4-208ENST00000565160 CROCC2H7BZ55 1655 aa6.74□□□□□ -1.33
BBS4-208ENST00000565160 A0A096LPE4 126 aa6.74□□□□□ -1.33
BBS4-208ENST00000565160 A0A1W2PPZ6 126 aa6.74□□□□□ -1.33
BBS4-208ENST00000565160 PIK3R2O00459 728 aa6.74□□□□□ -1.33
BBS4-208ENST00000565160 PRPF40AO75400 957 aaKnown RBP6.74□□□□□ -1.33
BBS4-208ENST00000565160 PRELPP51888 382 aa6.74□□□□□ -1.33
BBS4-208ENST00000565160 KCNMA1Q12791 1236 aa6.74□□□□□ -1.33
BBS4-208ENST00000565160 SETDB1Q15047 1291 aa6.74□□□□□ -1.33
BBS4-208ENST00000565160 HGSNATQ68CP4 663 aa6.74□□□□□ -1.33
BBS4-208ENST00000565160 PRPF40BQ6NWY9 871 aaKnown RBP6.74□□□□□ -1.33
BBS4-208ENST00000565160 NXPE4Q6UWF7 544 aa6.74□□□□□ -1.33
BBS4-208ENST00000565160 CACTIN-AS1Q8N1I8 211 aa6.74□□□□□ -1.33
BBS4-208ENST00000565160 BSNDQ8WZ55 320 aa6.74□□□□□ -1.33
BBS4-208ENST00000565160 DUSP9Q99956 384 aaKnown RBP6.74□□□□□ -1.33
BBS4-208ENST00000565160 OSBPL7Q9BZF2 842 aa6.74□□□□□ -1.33
BBS4-208ENST00000565160 C19orf44Q9H6X5 657 aa6.74□□□□□ -1.33
BBS4-208ENST00000565160 PPME1Q9Y570 386 aa6.74□□□□□ -1.33
BBS4-208ENST00000565160 EID1Q9Y6B2 187 aa6.74□□□□□ -1.33
BBS4-208ENST00000565160 NRAPQ86VF7 1730 aa6.73□□□□□ -1.33
BBS4-208ENST00000565160 PTPN23Q9H3S7 1636 aa6.73□□□□□ -1.33
BBS4-208ENST00000565160 TRPM2O94759 1503 aa6.73□□□□□ -1.33
BBS4-208ENST00000565160 TMEM238LA0A1B0GVL6 79 aa6.73□□□□□ -1.33
BBS4-208ENST00000565160 RNF225M0QZC1 329 aaPredicted RBP6.73□□□□□ -1.33
BBS4-208ENST00000565160 TM4SF5O14894 197 aa6.73□□□□□ -1.33
BBS4-208ENST00000565160 FMR1NBQ8N0W7 255 aaPredicted RBP6.73□□□□□ -1.33
BBS4-208ENST00000565160 NOP53Q9NZM5 478 aaKnown RBP6.73□□□□□ -1.33
BBS4-208ENST00000565160 ARHGAP31Q2M1Z3 1444 aa6.73□□□□□ -1.33
BBS4-208ENST00000565160 PTPRUQ92729 1446 aa6.73□□□□□ -1.33
BBS4-208ENST00000565160 GCC2Q8IWJ2 1684 aa6.72□□□□□ -1.33
BBS4-208ENST00000565160 H3BRJ5 948 aa6.72□□□□□ -1.33
BBS4-208ENST00000565160 ITPKAP23677 461 aa6.72□□□□□ -1.33
BBS4-208ENST00000565160 RANGAP1P46060 587 aaPredicted RBP6.72□□□□□ -1.33
BBS4-208ENST00000565160 RASSF7Q02833 373 aa6.72□□□□□ -1.33
BBS4-208ENST00000565160 TRIM28Q13263 835 aaKnown RBP6.72□□□□□ -1.33
BBS4-208ENST00000565160 GALNT11Q8NCW6 608 aa6.72□□□□□ -1.33
BBS4-208ENST00000565160 CAMKK2Q96RR4 588 aa6.72□□□□□ -1.33
BBS4-208ENST00000565160 CARD10Q9BWT7 1032 aa6.72□□□□□ -1.33
BBS4-208ENST00000565160 BCL2L13Q9BXK5 485 aa6.72□□□□□ -1.33
BBS4-208ENST00000565160 FMN1Q68DA7 1419 aa6.72□□□□□ -1.33
BBS4-208ENST00000565160 ADAMTS13Q76LX8 1427 aa6.72□□□□□ -1.33
BBS4-208ENST00000565160 TMEM131LA2VDJ0 1609 aa6.72□□□□□ -1.33
BBS4-208ENST00000565160 ABCA3Q99758 1704 aa6.71□□□□□ -1.34
BBS4-208ENST00000565160 SPDYE3A6NKU9 549 aa6.71□□□□□ -1.34
BBS4-208ENST00000565160 GNA15P30679 374 aa6.71□□□□□ -1.34
BBS4-208ENST00000565160 FCGRTP55899 365 aa6.71□□□□□ -1.34
BBS4-208ENST00000565160 EZH2Q15910 746 aaKnown RBP6.71□□□□□ -1.34
BBS4-208ENST00000565160 GRIK4Q16099 956 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms