RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 CYP2E1P05181 493 aaPredicted RBP16.68■□□□□ 0.26
VPS9D1-204ENST00000565023 RRP1P56182 461 aaKnown RBP16.68■□□□□ 0.26
VPS9D1-204ENST00000565023 INHBEP58166 350 aa16.68■□□□□ 0.26
VPS9D1-204ENST00000565023 CCL15Q16663 113 aa16.68■□□□□ 0.26
VPS9D1-204ENST00000565023 RPAP2Q8IXW5 612 aaPredicted RBP16.68■□□□□ 0.26
VPS9D1-204ENST00000565023 RHPN1Q8TCX5 695 aa16.68■□□□□ 0.26
VPS9D1-204ENST00000565023 NOL10Q9BSC4 688 aaKnown RBP16.68■□□□□ 0.26
VPS9D1-204ENST00000565023 GPR75-ASB3A0A0A6YYF3 556 aa16.67■□□□□ 0.26
VPS9D1-204ENST00000565023 ENTPD3O75355 529 aa16.67■□□□□ 0.26
VPS9D1-204ENST00000565023 WDHD1O75717 1129 aaPredicted RBP16.67■□□□□ 0.26
VPS9D1-204ENST00000565023 ALDH1A1P00352 501 aa16.67■□□□□ 0.26
VPS9D1-204ENST00000565023 HSP90AB4PQ58FF6 505 aa16.67■□□□□ 0.26
VPS9D1-204ENST00000565023 NAA16Q6N069 864 aaPredicted RBP16.67■□□□□ 0.26
VPS9D1-204ENST00000565023 SIRT2Q8IXJ6 389 aa16.67■□□□□ 0.26
VPS9D1-204ENST00000565023 FAM163AQ96GL9 167 aaPredicted RBP16.67■□□□□ 0.26
VPS9D1-204ENST00000565023 IDI2Q9BXS1 227 aa16.67■□□□□ 0.26
VPS9D1-204ENST00000565023 CHMP4BQ9H444 224 aaKnown RBP16.67■□□□□ 0.26
VPS9D1-204ENST00000565023 PIH1D3Q9NQM4 214 aaKnown RBP16.67■□□□□ 0.26
VPS9D1-204ENST00000565023 DDTLA6NHG4 134 aaPredicted RBP16.66■□□□□ 0.26
VPS9D1-204ENST00000565023 SPDYE5A6NIY4 337 aa16.66■□□□□ 0.26
VPS9D1-204ENST00000565023 RHBDL3P58872 404 aa16.66■□□□□ 0.26
VPS9D1-204ENST00000565023 OTUD7BQ6GQQ9 843 aa16.66■□□□□ 0.26
VPS9D1-204ENST00000565023 SH3BP5LQ7L8J4 393 aa16.66■□□□□ 0.26
VPS9D1-204ENST00000565023 CTU1Q7Z7A3 348 aaKnown RBP16.66■□□□□ 0.26
VPS9D1-204ENST00000565023 ERO1BQ86YB8 467 aa16.66■□□□□ 0.26
VPS9D1-204ENST00000565023 TEX11Q8IYF3 940 aa16.66■□□□□ 0.26
VPS9D1-204ENST00000565023 PTPN18Q99952 460 aa16.66■□□□□ 0.26
VPS9D1-204ENST00000565023 AATFQ9NY61 560 aaKnown RBP eCLIP16.66■□□□□ 0.26
VPS9D1-204ENST00000565023 RFX7Q2KHR2 1363 aa16.65■□□□□ 0.26
VPS9D1-204ENST00000565023 FAM196BA6NMK8 535 aa16.65■□□□□ 0.26
VPS9D1-204ENST00000565023 FKTNO75072 461 aa16.65■□□□□ 0.26
VPS9D1-204ENST00000565023 IDH1O75874 414 aaKnown RBP16.65■□□□□ 0.26
VPS9D1-204ENST00000565023 GTF2A2P52657 109 aa16.65■□□□□ 0.26
VPS9D1-204ENST00000565023 SH3RF3Q8TEJ3 882 aaPredicted RBP16.65■□□□□ 0.26
VPS9D1-204ENST00000565023 BRI3BPQ8WY22 251 aa16.65■□□□□ 0.26
VPS9D1-204ENST00000565023 MS4A4AQ96JQ5 239 aa16.65■□□□□ 0.26
VPS9D1-204ENST00000565023 CDK5RAP2Q96SN8 1893 aa16.65■□□□□ 0.26
VPS9D1-204ENST00000565023 IRF6O14896 467 aa16.64■□□□□ 0.25
VPS9D1-204ENST00000565023 CRHR2Q13324 411 aa16.64■□□□□ 0.25
VPS9D1-204ENST00000565023 CLASRPQ8N2M8 674 aaKnown RBP16.64■□□□□ 0.25
VPS9D1-204ENST00000565023 KIF1BPQ96EK5 621 aa16.64■□□□□ 0.25
VPS9D1-204ENST00000565023 ANTXR1Q9H6X2 564 aa16.64■□□□□ 0.25
VPS9D1-204ENST00000565023 IFIT2P09913 472 aaKnown RBP16.63■□□□□ 0.25
VPS9D1-204ENST00000565023 CYP7A1P22680 504 aa16.63■□□□□ 0.25
VPS9D1-204ENST00000565023 DYNLL1P63167 89 aaKnown RBP16.63■□□□□ 0.25
VPS9D1-204ENST00000565023 PPIL2Q13356 520 aa16.63■□□□□ 0.25
VPS9D1-204ENST00000565023 TAF1CQ15572 869 aaPredicted RBP16.63■□□□□ 0.25
VPS9D1-204ENST00000565023 ADGRA1Q86SQ6 560 aa16.63■□□□□ 0.25
VPS9D1-204ENST00000565023 FAM43AQ8N2R8 423 aa16.63■□□□□ 0.25
VPS9D1-204ENST00000565023 ZNF512BQ96KM6 892 aaPredicted RBP16.63■□□□□ 0.25
VPS9D1-204ENST00000565023 TESPA1A2RU30 521 aaPredicted RBP16.62■□□□□ 0.25
VPS9D1-204ENST00000565023 ECM2O94769 699 aaPredicted RBP16.62■□□□□ 0.25
VPS9D1-204ENST00000565023 BAG3O95817 575 aa16.62■□□□□ 0.25
VPS9D1-204ENST00000565023 SNAPC2Q13487 334 aa16.62■□□□□ 0.25
VPS9D1-204ENST00000565023 SLC4A8Q2Y0W8 1093 aa16.62■□□□□ 0.25
VPS9D1-204ENST00000565023 MAPKAPK5Q8IW41 473 aa16.62■□□□□ 0.25
VPS9D1-204ENST00000565023 MAGEB6Q8N7X4 407 aa16.62■□□□□ 0.25
VPS9D1-204ENST00000565023 DNAJC2Q99543 621 aaKnown RBP16.62■□□□□ 0.25
VPS9D1-204ENST00000565023 OSBPL5Q9H0X9 879 aaPredicted RBP16.62■□□□□ 0.25
VPS9D1-204ENST00000565023 ZNF112Q9UJU3 913 aa16.62■□□□□ 0.25
VPS9D1-204ENST00000565023 DOCK1Q14185 1865 aa16.62■□□□□ 0.25
VPS9D1-204ENST00000565023 ATRNL1Q5VV63 1379 aa16.62■□□□□ 0.25
VPS9D1-204ENST00000565023 RAB11FIP3O75154 756 aa16.61■□□□□ 0.25
VPS9D1-204ENST00000565023 CETPP11597 493 aa16.61■□□□□ 0.25
VPS9D1-204ENST00000565023 PPATQ06203 517 aa16.61■□□□□ 0.25
VPS9D1-204ENST00000565023 CCDC84Q86UT8 332 aaPredicted RBP16.61■□□□□ 0.25
VPS9D1-204ENST00000565023 MIGA1Q8NAN2 632 aa16.61■□□□□ 0.25
VPS9D1-204ENST00000565023 CD99L2Q8TCZ2 262 aa16.61■□□□□ 0.25
VPS9D1-204ENST00000565023 TGFBRAP1Q8WUH2 860 aa16.61■□□□□ 0.25
VPS9D1-204ENST00000565023 CFHR5Q9BXR6 569 aa16.61■□□□□ 0.25
VPS9D1-204ENST00000565023 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.61■□□□□ 0.25
VPS9D1-204ENST00000565023 PICK1Q9NRD5 415 aa16.61■□□□□ 0.25
VPS9D1-204ENST00000565023 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.61■□□□□ 0.25
VPS9D1-204ENST00000565023 ATAD5Q96QE3 1844 aa16.61■□□□□ 0.25
VPS9D1-204ENST00000565023 BTBD19C9JJ37 291 aa16.6■□□□□ 0.25
VPS9D1-204ENST00000565023 SMARCA5O60264 1052 aaPredicted RBP16.6■□□□□ 0.25
VPS9D1-204ENST00000565023 ZFYVE28Q9HCC9 887 aa16.6■□□□□ 0.25
VPS9D1-204ENST00000565023 TRIM17Q9Y577 477 aa16.6■□□□□ 0.25
VPS9D1-204ENST00000565023 FOCADQ5VW36 1801 aa16.6■□□□□ 0.25
VPS9D1-204ENST00000565023 MYH1P12882 1939 aa16.6■□□□□ 0.25
VPS9D1-204ENST00000565023 PHF20L1A8MW92 1017 aa16.59■□□□□ 0.25
VPS9D1-204ENST00000565023 NOL9Q5SY16 702 aaKnown RBP16.59■□□□□ 0.25
VPS9D1-204ENST00000565023 SCYL3Q8IZE3 742 aa16.59■□□□□ 0.25
VPS9D1-204ENST00000565023 SAP30BPQ9UHR5 308 aaKnown RBP16.59■□□□□ 0.25
VPS9D1-204ENST00000565023 ZHX2Q9Y6X8 837 aa16.59■□□□□ 0.25
VPS9D1-204ENST00000565023 GOLIM4O00461 696 aa16.58■□□□□ 0.24
VPS9D1-204ENST00000565023 MAP4K4O95819 1239 aaPredicted RBP16.58■□□□□ 0.24
VPS9D1-204ENST00000565023 PLCG2P16885 1265 aa16.58■□□□□ 0.24
VPS9D1-204ENST00000565023 MAP3K12Q12852 859 aa16.58■□□□□ 0.24
VPS9D1-204ENST00000565023 NOM1Q5C9Z4 860 aaKnown RBP16.58■□□□□ 0.24
VPS9D1-204ENST00000565023 EDC3Q96F86 508 aaKnown RBP16.58■□□□□ 0.24
VPS9D1-204ENST00000565023 BOLA2Q9H3K6 86 aa16.58■□□□□ 0.24
VPS9D1-204ENST00000565023 HPS5Q9UPZ3 1129 aa16.58■□□□□ 0.24
VPS9D1-204ENST00000565023 SIPA1L1O43166 1804 aa16.58■□□□□ 0.24
VPS9D1-204ENST00000565023 ZSWIM8A7E2V4 1837 aa16.57■□□□□ 0.24
VPS9D1-204ENST00000565023 PHIPQ8WWQ0 1821 aa16.57■□□□□ 0.24
VPS9D1-204ENST00000565023 FLT1P17948 1338 aa16.57■□□□□ 0.24
VPS9D1-204ENST00000565023 SOX10P56693 466 aa16.57■□□□□ 0.24
VPS9D1-204ENST00000565023 PPP4CP60510 307 aa16.57■□□□□ 0.24
VPS9D1-204ENST00000565023 SP3Q02447 781 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms