RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 IDI2Q9BXS1 227 aa12.09□□□□□ -0.47
CDH1-206ENST00000564676 AATFQ9NY61 560 aaKnown RBP eCLIP12.09□□□□□ -0.47
CDH1-206ENST00000564676 MYO5AQ9Y4I1 1855 aaKnown RBP12.08□□□□□ -0.48
CDH1-206ENST00000564676 UNCXA6NJT0 531 aa12.08□□□□□ -0.48
CDH1-206ENST00000564676 GOLIM4O00461 696 aa12.08□□□□□ -0.48
CDH1-206ENST00000564676 WDHD1O75717 1129 aaPredicted RBP12.08□□□□□ -0.48
CDH1-206ENST00000564676 PLCG2P16885 1265 aa12.08□□□□□ -0.48
CDH1-206ENST00000564676 ATP5JP18859 108 aa12.08□□□□□ -0.48
CDH1-206ENST00000564676 RHBDL3P58872 404 aa12.08□□□□□ -0.48
CDH1-206ENST00000564676 MAP3K9P80192 1104 aa12.08□□□□□ -0.48
CDH1-206ENST00000564676 MIGA2Q7L4E1 593 aa12.08□□□□□ -0.48
CDH1-206ENST00000564676 ZFPM1Q8IX07 1006 aa12.08□□□□□ -0.48
CDH1-206ENST00000564676 TEX11Q8IYF3 940 aa12.08□□□□□ -0.48
CDH1-206ENST00000564676 ANKRD13AQ8IZ07 590 aa12.08□□□□□ -0.48
CDH1-206ENST00000564676 GPATCH3Q96I76 525 aa12.08□□□□□ -0.48
CDH1-206ENST00000564676 CLMNQ96JQ2 1002 aa12.08□□□□□ -0.48
CDH1-206ENST00000564676 RPAP1Q9BWH6 1393 aaPredicted RBP12.07□□□□□ -0.48
CDH1-206ENST00000564676 FOXN1O15353 648 aa12.07□□□□□ -0.48
CDH1-206ENST00000564676 CTCFP49711 727 aaPredicted RBP12.07□□□□□ -0.48
CDH1-206ENST00000564676 PPP4CP60510 307 aa12.07□□□□□ -0.48
CDH1-206ENST00000564676 HDAC1Q13547 482 aaPredicted RBP12.07□□□□□ -0.48
CDH1-206ENST00000564676 ANKRD45Q5TZF3 282 aa12.07□□□□□ -0.48
CDH1-206ENST00000564676 SH3RF3Q8TEJ3 882 aaPredicted RBP12.07□□□□□ -0.48
CDH1-206ENST00000564676 GCC1Q96CN9 775 aa12.07□□□□□ -0.48
CDH1-206ENST00000564676 HAUS7Q99871 368 aa12.07□□□□□ -0.48
CDH1-206ENST00000564676 ZNF341Q9BYN7 854 aa12.07□□□□□ -0.48
CDH1-206ENST00000564676 RWDD1Q9H446 243 aaPredicted RBP12.07□□□□□ -0.48
CDH1-206ENST00000564676 DDX4Q9NQI0 724 aaKnown RBP12.07□□□□□ -0.48
CDH1-206ENST00000564676 ECHDC1Q9NTX5 307 aa12.07□□□□□ -0.48
CDH1-206ENST00000564676 CSADQ9Y600 493 aa12.07□□□□□ -0.48
CDH1-206ENST00000564676 IRX6P78412 446 aaPredicted RBP12.06□□□□□ -0.48
CDH1-206ENST00000564676 SPRYD7Q5W111 196 aa12.06□□□□□ -0.48
CDH1-206ENST00000564676 TMED8Q6PL24 325 aaPredicted RBP12.06□□□□□ -0.48
CDH1-206ENST00000564676 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.06□□□□□ -0.48
CDH1-206ENST00000564676 ADGRA1Q86SQ6 560 aa12.06□□□□□ -0.48
CDH1-206ENST00000564676 MIGA1Q8NAN2 632 aa12.06□□□□□ -0.48
CDH1-206ENST00000564676 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.06□□□□□ -0.48
CDH1-206ENST00000564676 EDC3Q96F86 508 aaKnown RBP12.06□□□□□ -0.48
CDH1-206ENST00000564676 WNK4Q96J92 1243 aa12.06□□□□□ -0.48
CDH1-206ENST00000564676 WRNIP1Q96S55 665 aa12.06□□□□□ -0.48
CDH1-206ENST00000564676 CSRNP1Q96S65 589 aa12.06□□□□□ -0.48
CDH1-206ENST00000564676 ELP3Q9H9T3 547 aa12.06□□□□□ -0.48
CDH1-206ENST00000564676 PAG1Q9NWQ8 432 aa12.06□□□□□ -0.48
CDH1-206ENST00000564676 DDTLA6NHG4 134 aaPredicted RBP12.05□□□□□ -0.48
CDH1-206ENST00000564676 CA12O43570 354 aa12.05□□□□□ -0.48
CDH1-206ENST00000564676 DYNLL1P63167 89 aaKnown RBP12.05□□□□□ -0.48
CDH1-206ENST00000564676 VGLL4Q14135 290 aa12.05□□□□□ -0.48
CDH1-206ENST00000564676 SLC9C2Q5TAH2 1124 aa12.05□□□□□ -0.48
CDH1-206ENST00000564676 SH3BP5LQ7L8J4 393 aa12.05□□□□□ -0.48
CDH1-206ENST00000564676 TGFBRAP1Q8WUH2 860 aa12.05□□□□□ -0.48
CDH1-206ENST00000564676 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.05□□□□□ -0.48
CDH1-206ENST00000564676 MAST2Q6P0Q8 1798 aa12.05□□□□□ -0.48
CDH1-206ENST00000564676 RFX7Q2KHR2 1363 aa12.05□□□□□ -0.48
CDH1-206ENST00000564676 THSD7BQ9C0I4 1608 aa12.04□□□□□ -0.48
CDH1-206ENST00000564676 MANSC4A6NHS7 340 aaPredicted RBP12.04□□□□□ -0.48
CDH1-206ENST00000564676 ZBTB48P10074 688 aaPredicted RBP12.04□□□□□ -0.48
CDH1-206ENST00000564676 PRKAR2AP13861 404 aaKnown RBP12.04□□□□□ -0.48
CDH1-206ENST00000564676 PDE6AP16499 860 aa12.04□□□□□ -0.48
CDH1-206ENST00000564676 LBX1P52954 281 aa12.04□□□□□ -0.48
CDH1-206ENST00000564676 SREBF2Q12772 1141 aa12.04□□□□□ -0.48
CDH1-206ENST00000564676 TSHZ3Q63HK5 1081 aa12.04□□□□□ -0.48
CDH1-206ENST00000564676 CERS3Q8IU89 383 aa12.04□□□□□ -0.48
CDH1-206ENST00000564676 MAPKAPK5Q8IW41 473 aa12.04□□□□□ -0.48
CDH1-206ENST00000564676 ZKSCAN4Q969J2 545 aaPredicted RBP12.04□□□□□ -0.48
CDH1-206ENST00000564676 OPTNQ96CV9 577 aa12.04□□□□□ -0.48
CDH1-206ENST00000564676 OSBPL5Q9H0X9 879 aaPredicted RBP12.04□□□□□ -0.48
CDH1-206ENST00000564676 TSKSQ9UJT2 592 aa12.04□□□□□ -0.48
CDH1-206ENST00000564676 ZNF532Q9HCE3 1301 aa12.04□□□□□ -0.48
CDH1-206ENST00000564676 MAGEB6P1A0A0J9YX57 407 aa12.03□□□□□ -0.48
CDH1-206ENST00000564676 ERC2O15083 957 aa12.03□□□□□ -0.48
CDH1-206ENST00000564676 TRPA1O75762 1119 aa12.03□□□□□ -0.48
CDH1-206ENST00000564676 HSPA8P11142 646 aaKnown RBP12.03□□□□□ -0.48
CDH1-206ENST00000564676 INPP5BP32019 993 aa12.03□□□□□ -0.48
CDH1-206ENST00000564676 USP5P45974 858 aa12.03□□□□□ -0.48
CDH1-206ENST00000564676 OTUD7AQ8TE49 926 aaPredicted RBP12.03□□□□□ -0.48
CDH1-206ENST00000564676 RNF186Q9NXI6 227 aa12.03□□□□□ -0.48
CDH1-206ENST00000564676 ZNF112Q9UJU3 913 aa12.03□□□□□ -0.48
CDH1-206ENST00000564676 TTC41PQ6P2S7 1318 aa12.03□□□□□ -0.48
CDH1-206ENST00000564676 PCNTO95613 3336 aa12.02□□□□□ -0.49
CDH1-206ENST00000564676 IGHDP01880 384 aa12.02□□□□□ -0.49
CDH1-206ENST00000564676 MX1P20591 662 aa12.02□□□□□ -0.49
CDH1-206ENST00000564676 ADD2P35612 726 aa12.02□□□□□ -0.49
CDH1-206ENST00000564676 GJA5P36382 358 aa12.02□□□□□ -0.49
CDH1-206ENST00000564676 TM4SF4P48230 202 aa12.02□□□□□ -0.49
CDH1-206ENST00000564676 B4GALNT3Q6L9W6 998 aa12.02□□□□□ -0.49
CDH1-206ENST00000564676 ZSCAN25Q6NSZ9 544 aa12.02□□□□□ -0.49
CDH1-206ENST00000564676 ERO1BQ86YB8 467 aa12.02□□□□□ -0.49
CDH1-206ENST00000564676 OTUD5Q96G74 571 aa12.02□□□□□ -0.49
CDH1-206ENST00000564676 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.02□□□□□ -0.49
CDH1-206ENST00000564676 PRDM10Q9NQV6 1147 aa12.02□□□□□ -0.49
CDH1-206ENST00000564676 SAP30BPQ9UHR5 308 aaKnown RBP12.02□□□□□ -0.49
CDH1-206ENST00000564676 SNCAIPQ9Y6H5 919 aa12.02□□□□□ -0.49
CDH1-206ENST00000564676 ATRNL1Q5VV63 1379 aa12.02□□□□□ -0.49
CDH1-206ENST00000564676 DOCK2Q92608 1830 aa12.02□□□□□ -0.49
CDH1-206ENST00000564676 SPDYE5A6NIY4 337 aa12.01□□□□□ -0.49
CDH1-206ENST00000564676 GLRX3O76003 335 aaKnown RBP12.01□□□□□ -0.49
CDH1-206ENST00000564676 SLURP2P0DP57 97 aa12.01□□□□□ -0.49
CDH1-206ENST00000564676 INHBEP58166 350 aa12.01□□□□□ -0.49
CDH1-206ENST00000564676 SMC5Q8IY18 1101 aa12.01□□□□□ -0.49
CDH1-206ENST00000564676 TRIM34Q9BYJ4 488 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms