RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 MISP3Q96FF7 219 aa8.14□□□□□ -1.11
CHD9-212ENST00000564641 ZC3H7BQ9UGR2 993 aaKnown RBP8.14□□□□□ -1.11
CHD9-212ENST00000564641 RNGTTO60942 597 aaKnown RBP8.13□□□□□ -1.11
CHD9-212ENST00000564641 TTLL4Q14679 1199 aa8.13□□□□□ -1.11
CHD9-212ENST00000564641 LRRC14Q15048 493 aa8.13□□□□□ -1.11
CHD9-212ENST00000564641 ABI1Q8IZP0 508 aa8.13□□□□□ -1.11
CHD9-212ENST00000564641 RNF214Q8ND24 703 aa8.13□□□□□ -1.11
CHD9-212ENST00000564641 ACSBG1Q96GR2 724 aa8.13□□□□□ -1.11
CHD9-212ENST00000564641 FMNL2Q96PY5 1086 aa8.13□□□□□ -1.11
CHD9-212ENST00000564641 MKNK2Q9HBH9 465 aa8.13□□□□□ -1.11
CHD9-212ENST00000564641 LGR6Q9HBX8 967 aa8.13□□□□□ -1.11
CHD9-212ENST00000564641 CBX8Q9HC52 389 aa8.13□□□□□ -1.11
CHD9-212ENST00000564641 CACNA2D2Q9NY47 1150 aa8.13□□□□□ -1.11
CHD9-212ENST00000564641 FAM8A1Q9UBU6 413 aa8.13□□□□□ -1.11
CHD9-212ENST00000564641 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.12□□□□□ -1.11
CHD9-212ENST00000564641 TRIM37O94972 964 aa8.12□□□□□ -1.11
CHD9-212ENST00000564641 FAM87AP0C7U9 286 aa8.12□□□□□ -1.11
CHD9-212ENST00000564641 TPTE2Q6XPS3 522 aa8.12□□□□□ -1.11
CHD9-212ENST00000564641 FLCNQ8NFG4 579 aa8.12□□□□□ -1.11
CHD9-212ENST00000564641 SSU72Q9NP77 194 aaKnown RBP8.12□□□□□ -1.11
CHD9-212ENST00000564641 SLC5A6Q9Y289 635 aa8.12□□□□□ -1.11
CHD9-212ENST00000564641 HCLS1P14317 486 aaPredicted RBP8.11□□□□□ -1.11
CHD9-212ENST00000564641 CDK5R2Q13319 367 aa8.11□□□□□ -1.11
CHD9-212ENST00000564641 STK35Q8TDR2 534 aa8.11□□□□□ -1.11
CHD9-212ENST00000564641 GPBAR1Q8TDU6 330 aa8.11□□□□□ -1.11
CHD9-212ENST00000564641 OSBPL7Q9BZF2 842 aa8.11□□□□□ -1.11
CHD9-212ENST00000564641 CYP8B1Q9UNU6 501 aa8.11□□□□□ -1.11
CHD9-212ENST00000564641 ENC1O14682 589 aa8.1□□□□□ -1.11
CHD9-212ENST00000564641 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.1□□□□□ -1.11
CHD9-212ENST00000564641 C12orf49Q9H741 205 aa8.1□□□□□ -1.11
CHD9-212ENST00000564641 BMP6P22004 513 aa8.09□□□□□ -1.11
CHD9-212ENST00000564641 LLGL2Q6P1M3 1020 aa8.09□□□□□ -1.11
CHD9-212ENST00000564641 CBLL1Q75N03 491 aa8.09□□□□□ -1.11
CHD9-212ENST00000564641 NETO1Q8TDF5 533 aa8.09□□□□□ -1.11
CHD9-212ENST00000564641 PAK6Q9NQU5 681 aaPredicted RBP8.09□□□□□ -1.11
CHD9-212ENST00000564641 KRTAP9-6A0A140TA67 174 aa8.08□□□□□ -1.12
CHD9-212ENST00000564641 FANCGO15287 622 aa8.08□□□□□ -1.12
CHD9-212ENST00000564641 COL19A1Q14993 1142 aa8.08□□□□□ -1.12
CHD9-212ENST00000564641 NFXL1Q6ZNB6 911 aa8.08□□□□□ -1.12
CHD9-212ENST00000564641 KCT2Q8NC54 265 aa8.08□□□□□ -1.12
CHD9-212ENST00000564641 BCL7CQ8WUZ0 217 aaPredicted RBP8.08□□□□□ -1.12
CHD9-212ENST00000564641 ISL2Q96A47 359 aa8.08□□□□□ -1.12
CHD9-212ENST00000564641 DUSP23Q9BVJ7 150 aa8.08□□□□□ -1.12
CHD9-212ENST00000564641 GOLGA2P5Q9HBQ8 144 aa8.08□□□□□ -1.12
CHD9-212ENST00000564641 RNF114Q9Y508 228 aa8.08□□□□□ -1.12
CHD9-212ENST00000564641 LDHBP07195 334 aaKnown RBP8.07□□□□□ -1.12
CHD9-212ENST00000564641 NEFMP07197 916 aa8.07□□□□□ -1.12
CHD9-212ENST00000564641 ARHGAP27Q6ZUM4 889 aa8.07□□□□□ -1.12
CHD9-212ENST00000564641 PICK1Q9NRD5 415 aa8.07□□□□□ -1.12
CHD9-212ENST00000564641 VAV3Q9UKW4 847 aa8.07□□□□□ -1.12
CHD9-212ENST00000564641 P4HBP07237 508 aaKnown RBP8.06□□□□□ -1.12
CHD9-212ENST00000564641 JUNBP17275 347 aaPredicted RBP8.06□□□□□ -1.12
CHD9-212ENST00000564641 IFI16Q16666 785 aaKnown RBP8.06□□□□□ -1.12
CHD9-212ENST00000564641 SV2BQ7L1I2 683 aa8.06□□□□□ -1.12
CHD9-212ENST00000564641 KRTAP4-12Q9BQ66 201 aa8.06□□□□□ -1.12
CHD9-212ENST00000564641 WWC3Q9ULE0 1092 aa8.06□□□□□ -1.12
CHD9-212ENST00000564641 PAGE1O75459 146 aa8.05□□□□□ -1.12
CHD9-212ENST00000564641 USP17L7P0C7H9 530 aa8.05□□□□□ -1.12
CHD9-212ENST00000564641 GNA15P30679 374 aa8.05□□□□□ -1.12
CHD9-212ENST00000564641 PRKCQQ04759 706 aa8.05□□□□□ -1.12
CHD9-212ENST00000564641 RING1Q06587 406 aa8.05□□□□□ -1.12
CHD9-212ENST00000564641 CDC37L1Q7L3B6 337 aa8.05□□□□□ -1.12
CHD9-212ENST00000564641 GRIN3AQ8TCU5 1115 aa8.05□□□□□ -1.12
CHD9-212ENST00000564641 ASIC4Q96FT7 647 aa8.05□□□□□ -1.12
CHD9-212ENST00000564641 GTF2IRD1Q9UHL9 959 aa8.05□□□□□ -1.12
CHD9-212ENST00000564641 PCDHA4Q9UN74 947 aa8.05□□□□□ -1.12
CHD9-212ENST00000564641 TMEM265A0A087WTH1 108 aa8.04□□□□□ -1.12
CHD9-212ENST00000564641 PRPF40AO75400 957 aaKnown RBP8.04□□□□□ -1.12
CHD9-212ENST00000564641 FBXO24O75426 580 aa8.04□□□□□ -1.12
CHD9-212ENST00000564641 EIF4BP23588 611 aaKnown RBP8.04□□□□□ -1.12
CHD9-212ENST00000564641 PCNX4Q63HM2 1172 aa8.04□□□□□ -1.12
CHD9-212ENST00000564641 PLD6Q8N2A8 252 aaKnown RBP8.04□□□□□ -1.12
CHD9-212ENST00000564641 ELMO3Q96BJ8 720 aa8.04□□□□□ -1.12
CHD9-212ENST00000564641 SETDB2Q96T68 719 aa8.04□□□□□ -1.12
CHD9-212ENST00000564641 CEACAM5P06731 702 aa8.03□□□□□ -1.12
CHD9-212ENST00000564641 PLCL1Q15111 1095 aa8.03□□□□□ -1.12
CHD9-212ENST00000564641 PPM1JQ5JR12 505 aa8.03□□□□□ -1.12
CHD9-212ENST00000564641 TOP6BLQ8N6T0 577 aa8.03□□□□□ -1.12
CHD9-212ENST00000564641 FAM181AQ8N9Y4 354 aa8.03□□□□□ -1.12
CHD9-212ENST00000564641 SNX11Q9Y5W9 270 aa8.03□□□□□ -1.12
CHD9-212ENST00000564641 IGF2BP3O00425 579 aaKnown RBP eCLIP8.02□□□□□ -1.13
CHD9-212ENST00000564641 BIN1O00499 593 aa8.02□□□□□ -1.13
CHD9-212ENST00000564641 LEFTY1O75610 366 aa8.02□□□□□ -1.13
CHD9-212ENST00000564641 ITGB5P18084 799 aa8.02□□□□□ -1.13
CHD9-212ENST00000564641 OXCT1P55809 520 aa8.02□□□□□ -1.13
CHD9-212ENST00000564641 ZBTB37Q5TC79 503 aa8.02□□□□□ -1.13
CHD9-212ENST00000564641 ZNF507Q8TCN5 953 aa8.02□□□□□ -1.13
CHD9-212ENST00000564641 HRASLS5Q96KN8 279 aa8.02□□□□□ -1.13
CHD9-212ENST00000564641 PRDM10Q9NQV6 1147 aa8.02□□□□□ -1.13
CHD9-212ENST00000564641 TTF2Q9UNY4 1162 aaKnown RBP8.02□□□□□ -1.13
CHD9-212ENST00000564641 DCDC2CA8MYV0 355 aa8.01□□□□□ -1.13
CHD9-212ENST00000564641 CELA3AP09093 270 aa8.01□□□□□ -1.13
CHD9-212ENST00000564641 NTF4P34130 210 aa8.01□□□□□ -1.13
CHD9-212ENST00000564641 RPS26P62854 115 aaKnown RBP8.01□□□□□ -1.13
CHD9-212ENST00000564641 MPRIPQ6WCQ1 1025 aa8.01□□□□□ -1.13
CHD9-212ENST00000564641 HDXQ7Z353 690 aa8.01□□□□□ -1.13
CHD9-212ENST00000564641 C12orf40Q86WS4 652 aa8.01□□□□□ -1.13
CHD9-212ENST00000564641 LRIG2O94898 1065 aa8□□□□□ -1.13
CHD9-212ENST00000564641 LMNB1P20700 586 aa8□□□□□ -1.13
CHD9-212ENST00000564641 FUT4P22083 530 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms