RNA–Protein interactions for RNA: ENST00000564519.1

HERC2-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 3

Gene HERC2, Length 323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-206ENST00000564519 PTPN18Q99952 460 aa15.56■□□□□ 0.08
HERC2-206ENST00000564519 ZNF341Q9BYN7 854 aa15.56■□□□□ 0.08
HERC2-206ENST00000564519 PIH1D3Q9NQM4 214 aaKnown RBP15.56■□□□□ 0.08
HERC2-206ENST00000564519 LRP2BPQ9P2M1 347 aa15.56■□□□□ 0.08
HERC2-206ENST00000564519 CSADQ9Y600 493 aa15.56■□□□□ 0.08
HERC2-206ENST00000564519 ATRNL1Q5VV63 1379 aa15.55■□□□□ 0.08
HERC2-206ENST00000564519 APBB1O00213 710 aa15.55■□□□□ 0.08
HERC2-206ENST00000564519 PICALMQ13492 652 aa15.55■□□□□ 0.08
HERC2-206ENST00000564519 PDE3AQ14432 1141 aa15.55■□□□□ 0.08
HERC2-206ENST00000564519 DCAF15Q66K64 600 aa15.55■□□□□ 0.08
HERC2-206ENST00000564519 ERC1Q8IUD2 1116 aa15.55■□□□□ 0.08
HERC2-206ENST00000564519 OTUD5Q96G74 571 aa15.55■□□□□ 0.08
HERC2-206ENST00000564519 MS4A4AQ96JQ5 239 aa15.55■□□□□ 0.08
HERC2-206ENST00000564519 NDUFB9Q9Y6M9 179 aa15.55■□□□□ 0.08
HERC2-206ENST00000564519 TESPA1A2RU30 521 aaPredicted RBP15.54■□□□□ 0.08
HERC2-206ENST00000564519 DDTLA6NHG4 134 aaPredicted RBP15.54■□□□□ 0.08
HERC2-206ENST00000564519 SPDYE5A6NIY4 337 aa15.54■□□□□ 0.08
HERC2-206ENST00000564519 ENTPD3O75355 529 aa15.54■□□□□ 0.08
HERC2-206ENST00000564519 GSTO1P78417 241 aa15.54■□□□□ 0.08
HERC2-206ENST00000564519 ADGRA1Q86SQ6 560 aa15.54■□□□□ 0.08
HERC2-206ENST00000564519 BRI3BPQ8WY22 251 aa15.54■□□□□ 0.08
HERC2-206ENST00000564519 GCC1Q96CN9 775 aa15.54■□□□□ 0.08
HERC2-206ENST00000564519 HOOK2Q96ED9 719 aa15.54■□□□□ 0.08
HERC2-206ENST00000564519 ZNF112Q9UJU3 913 aa15.54■□□□□ 0.08
HERC2-206ENST00000564519 LDHCP07864 332 aa15.53■□□□□ 0.08
HERC2-206ENST00000564519 ARHGEF6Q15052 776 aa15.53■□□□□ 0.08
HERC2-206ENST00000564519 OTOP1Q7RTM1 612 aa15.53■□□□□ 0.08
HERC2-206ENST00000564519 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.53■□□□□ 0.08
HERC2-206ENST00000564519 YTHDC1Q96MU7 727 aaKnown RBP15.53■□□□□ 0.08
HERC2-206ENST00000564519 EFCC1Q9HA90 598 aa15.53■□□□□ 0.08
HERC2-206ENST00000564519 CCL15-CCL14A0A0B4J2E2 113 aa15.52■□□□□ 0.08
HERC2-206ENST00000564519 HMMRO75330 724 aa15.52■□□□□ 0.08
HERC2-206ENST00000564519 CRHR2Q13324 411 aa15.52■□□□□ 0.08
HERC2-206ENST00000564519 CCL15Q16663 113 aa15.52■□□□□ 0.08
HERC2-206ENST00000564519 HSP90AB4PQ58FF6 505 aa15.52■□□□□ 0.08
HERC2-206ENST00000564519 NAA16Q6N069 864 aaPredicted RBP15.52■□□□□ 0.08
HERC2-206ENST00000564519 ERO1BQ86YB8 467 aa15.52■□□□□ 0.08
HERC2-206ENST00000564519 ZSCAN29Q8IWY8 852 aaPredicted RBP15.52■□□□□ 0.08
HERC2-206ENST00000564519 CD99L2Q8TCZ2 262 aa15.52■□□□□ 0.08
HERC2-206ENST00000564519 SH3RF3Q8TEJ3 882 aaPredicted RBP15.52■□□□□ 0.08
HERC2-206ENST00000564519 BCL11AQ9H165 835 aa15.52■□□□□ 0.08
HERC2-206ENST00000564519 ANTXR1Q9H6X2 564 aa15.52■□□□□ 0.08
HERC2-206ENST00000564519 AATFQ9NY61 560 aaKnown RBP eCLIP15.52■□□□□ 0.08
HERC2-206ENST00000564519 MYH2Q9UKX2 1941 aa15.51■□□□□ 0.07
HERC2-206ENST00000564519 PHF20L1A8MW92 1017 aa15.51■□□□□ 0.07
HERC2-206ENST00000564519 IRF6O14896 467 aa15.51■□□□□ 0.07
HERC2-206ENST00000564519 GTF2A2P52657 109 aa15.51■□□□□ 0.07
HERC2-206ENST00000564519 SP3Q02447 781 aa15.51■□□□□ 0.07
HERC2-206ENST00000564519 KIF1BPQ96EK5 621 aa15.51■□□□□ 0.07
HERC2-206ENST00000564519 CHMP4BQ9H444 224 aaKnown RBP15.51■□□□□ 0.07
HERC2-206ENST00000564519 MAP3K10Q02779 954 aa15.5■□□□□ 0.07
HERC2-206ENST00000564519 PPIL2Q13356 520 aa15.5■□□□□ 0.07
HERC2-206ENST00000564519 TEX11Q8IYF3 940 aa15.5■□□□□ 0.07
HERC2-206ENST00000564519 FAM43AQ8N2R8 423 aa15.5■□□□□ 0.07
HERC2-206ENST00000564519 TMEM106CQ9BVX2 250 aa15.5■□□□□ 0.07
HERC2-206ENST00000564519 PTPN22Q9Y2R2 807 aa15.5■□□□□ 0.07
HERC2-206ENST00000564519 RAB11FIP3O75154 756 aa15.49■□□□□ 0.07
HERC2-206ENST00000564519 NPM3O75607 178 aaKnown RBP15.49■□□□□ 0.07
HERC2-206ENST00000564519 IDH1O75874 414 aaKnown RBP15.49■□□□□ 0.07
HERC2-206ENST00000564519 DYNLL1P63167 89 aaKnown RBP15.49■□□□□ 0.07
HERC2-206ENST00000564519 PPATQ06203 517 aa15.49■□□□□ 0.07
HERC2-206ENST00000564519 NOL9Q5SY16 702 aaKnown RBP15.49■□□□□ 0.07
HERC2-206ENST00000564519 NBPF11Q86T75 865 aa15.49■□□□□ 0.07
HERC2-206ENST00000564519 CLASRPQ8N2M8 674 aaKnown RBP15.49■□□□□ 0.07
HERC2-206ENST00000564519 OSBPL5Q9H0X9 879 aaPredicted RBP15.49■□□□□ 0.07
HERC2-206ENST00000564519 ZFYVE28Q9HCC9 887 aa15.49■□□□□ 0.07
HERC2-206ENST00000564519 FAM196BA6NMK8 535 aa15.48■□□□□ 0.07
HERC2-206ENST00000564519 MAP4K4O95819 1239 aaPredicted RBP15.48■□□□□ 0.07
HERC2-206ENST00000564519 CYP7A1P22680 504 aa15.48■□□□□ 0.07
HERC2-206ENST00000564519 PPP4CP60510 307 aa15.48■□□□□ 0.07
HERC2-206ENST00000564519 TAF1CQ15572 869 aaPredicted RBP15.48■□□□□ 0.07
HERC2-206ENST00000564519 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.48■□□□□ 0.07
HERC2-206ENST00000564519 LAMB1P07942 1786 aa15.47■□□□□ 0.07
HERC2-206ENST00000564519 BTBD19C9JJ37 291 aa15.47■□□□□ 0.07
HERC2-206ENST00000564519 BAG3O95817 575 aa15.47■□□□□ 0.07
HERC2-206ENST00000564519 IFIT2P09913 472 aaKnown RBP15.47■□□□□ 0.07
HERC2-206ENST00000564519 CETPP11597 493 aa15.47■□□□□ 0.07
HERC2-206ENST00000564519 CAP1Q01518 475 aa15.47■□□□□ 0.07
HERC2-206ENST00000564519 SNAPC2Q13487 334 aa15.47■□□□□ 0.07
HERC2-206ENST00000564519 KIF22Q14807 665 aa15.47■□□□□ 0.07
HERC2-206ENST00000564519 MAPKAPK5Q8IW41 473 aa15.47■□□□□ 0.07
HERC2-206ENST00000564519 SCYL3Q8IZE3 742 aa15.47■□□□□ 0.07
HERC2-206ENST00000564519 MAGEB6Q8N7X4 407 aa15.47■□□□□ 0.07
HERC2-206ENST00000564519 MIGA1Q8NAN2 632 aa15.47■□□□□ 0.07
HERC2-206ENST00000564519 TGFBRAP1Q8WUH2 860 aa15.47■□□□□ 0.07
HERC2-206ENST00000564519 POTEFA5A3E0 1075 aa15.46■□□□□ 0.07
HERC2-206ENST00000564519 SMARCA5O60264 1052 aaPredicted RBP15.46■□□□□ 0.07
HERC2-206ENST00000564519 RRP1P56182 461 aaKnown RBP15.46■□□□□ 0.07
HERC2-206ENST00000564519 MOGSQ13724 837 aa15.46■□□□□ 0.07
HERC2-206ENST00000564519 RRP1BQ14684 758 aaKnown RBP15.46■□□□□ 0.07
HERC2-206ENST00000564519 SLC9C1Q4G0N8 1177 aa15.46■□□□□ 0.07
HERC2-206ENST00000564519 CCDC84Q86UT8 332 aaPredicted RBP15.46■□□□□ 0.07
HERC2-206ENST00000564519 EDC3Q96F86 508 aaKnown RBP15.46■□□□□ 0.07
HERC2-206ENST00000564519 NOL10Q9BSC4 688 aaKnown RBP15.46■□□□□ 0.07
HERC2-206ENST00000564519 KCNH4Q9UQ05 1017 aa15.46■□□□□ 0.07
HERC2-206ENST00000564519 MAST2Q6P0Q8 1798 aa15.46■□□□□ 0.07
HERC2-206ENST00000564519 FLT1P17948 1338 aa15.45■□□□□ 0.06
HERC2-206ENST00000564519 TBC1D12O60347 775 aa15.45■□□□□ 0.06
HERC2-206ENST00000564519 PTPRAP18433 802 aa15.45■□□□□ 0.06
HERC2-206ENST00000564519 SLC4A8Q2Y0W8 1093 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms