RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 GNRH1P01148 92 aa18.45■□□□□ 0.54
SPG7-210ENST00000564409 ANKRD23Q86SG2 305 aa18.45■□□□□ 0.54
SPG7-210ENST00000564409 ITPRIPQ8IWB1 547 aa18.45■□□□□ 0.54
SPG7-210ENST00000564409 ZSCAN29Q8IWY8 852 aaPredicted RBP18.45■□□□□ 0.54
SPG7-210ENST00000564409 NOP58Q9Y2X3 529 aaKnown RBP18.45■□□□□ 0.54
SPG7-210ENST00000564409 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.45■□□□□ 0.54
SPG7-210ENST00000564409 MS4A1P11836 297 aa18.44■□□□□ 0.54
SPG7-210ENST00000564409 OS9Q13438 667 aaPredicted RBP18.44■□□□□ 0.54
SPG7-210ENST00000564409 KIF22Q14807 665 aa18.44■□□□□ 0.54
SPG7-210ENST00000564409 CCDC158Q5M9N0 1113 aa18.44■□□□□ 0.54
SPG7-210ENST00000564409 ZFPM1Q8IX07 1006 aa18.44■□□□□ 0.54
SPG7-210ENST00000564409 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.44■□□□□ 0.54
SPG7-210ENST00000564409 NSUN4Q96CB9 384 aaKnown RBP18.44■□□□□ 0.54
SPG7-210ENST00000564409 ZNF512BQ96KM6 892 aaPredicted RBP18.44■□□□□ 0.54
SPG7-210ENST00000564409 RBBP6Q7Z6E9 1792 aaKnown RBP18.43■□□□□ 0.54
SPG7-210ENST00000564409 PHF20L1A8MW92 1017 aa18.43■□□□□ 0.54
SPG7-210ENST00000564409 TBC1D12O60347 775 aa18.43■□□□□ 0.54
SPG7-210ENST00000564409 SURF6O75683 361 aaKnown RBP18.43■□□□□ 0.54
SPG7-210ENST00000564409 MCAMP43121 646 aa18.43■□□□□ 0.54
SPG7-210ENST00000564409 TNNI3KQ59H18 835 aa18.43■□□□□ 0.54
SPG7-210ENST00000564409 SCYL3Q8IZE3 742 aa18.43■□□□□ 0.54
SPG7-210ENST00000564409 ARMC5Q96C12 935 aa18.43■□□□□ 0.54
SPG7-210ENST00000564409 PICK1Q9NRD5 415 aa18.43■□□□□ 0.54
SPG7-210ENST00000564409 RAI14Q9P0K7 980 aa18.43■□□□□ 0.54
SPG7-210ENST00000564409 LRP2BPQ9P2M1 347 aa18.43■□□□□ 0.54
SPG7-210ENST00000564409 FPGT-TNNI3KV9GXZ4 949 aa18.43■□□□□ 0.54
SPG7-210ENST00000564409 COL2A1P02458 1487 aaPredicted RBP18.43■□□□□ 0.54
SPG7-210ENST00000564409 CTNND1O60716 968 aaKnown RBP18.42■□□□□ 0.54
SPG7-210ENST00000564409 PRMT2P55345 433 aa18.42■□□□□ 0.54
SPG7-210ENST00000564409 RHBDL3P58872 404 aa18.42■□□□□ 0.54
SPG7-210ENST00000564409 ZNF384Q8TF68 577 aa18.42■□□□□ 0.54
SPG7-210ENST00000564409 NOL10Q9BSC4 688 aaKnown RBP18.42■□□□□ 0.54
SPG7-210ENST00000564409 KIAA0100Q14667 2235 aaKnown RBP18.42■□□□□ 0.54
SPG7-210ENST00000564409 DOCK1Q14185 1865 aa18.41■□□□□ 0.54
SPG7-210ENST00000564409 PLCG2P16885 1265 aa18.41■□□□□ 0.54
SPG7-210ENST00000564409 TTC39AQ5SRH9 613 aa18.41■□□□□ 0.54
SPG7-210ENST00000564409 SH3BP5LQ7L8J4 393 aa18.41■□□□□ 0.54
SPG7-210ENST00000564409 FASTKD5Q7L8L6 764 aaKnown RBP18.41■□□□□ 0.54
SPG7-210ENST00000564409 NBPF11Q86T75 865 aa18.41■□□□□ 0.54
SPG7-210ENST00000564409 DDX4Q9NQI0 724 aaKnown RBP18.41■□□□□ 0.54
SPG7-210ENST00000564409 MAST2Q6P0Q8 1798 aa18.4■□□□□ 0.54
SPG7-210ENST00000564409 DDTLA6NHG4 134 aaPredicted RBP18.4■□□□□ 0.54
SPG7-210ENST00000564409 PDHXO00330 501 aa18.4■□□□□ 0.54
SPG7-210ENST00000564409 BAG3O95817 575 aa18.4■□□□□ 0.54
SPG7-210ENST00000564409 RLBP1P12271 317 aa18.4■□□□□ 0.54
SPG7-210ENST00000564409 LACTBP83111 547 aaPredicted RBP18.4■□□□□ 0.54
SPG7-210ENST00000564409 PICALMQ13492 652 aa18.4■□□□□ 0.54
SPG7-210ENST00000564409 PI16Q6UXB8 463 aa18.4■□□□□ 0.54
SPG7-210ENST00000564409 TBC1D9Q6ZT07 1266 aa18.4■□□□□ 0.54
SPG7-210ENST00000564409 SLC45A1Q9Y2W3 748 aa18.4■□□□□ 0.54
SPG7-210ENST00000564409 PTPRFP10586 1907 aa18.39■□□□□ 0.53
SPG7-210ENST00000564409 SLC34A2O95436 690 aa18.39■□□□□ 0.53
SPG7-210ENST00000564409 PTPRAP18433 802 aa18.39■□□□□ 0.53
SPG7-210ENST00000564409 TMED8Q6PL24 325 aaPredicted RBP18.39■□□□□ 0.53
SPG7-210ENST00000564409 C17orf99Q6UX52 265 aa18.39■□□□□ 0.53
SPG7-210ENST00000564409 ERC1Q8IUD2 1116 aa18.39■□□□□ 0.53
SPG7-210ENST00000564409 PARK7Q99497 189 aaKnown RBP18.39■□□□□ 0.53
SPG7-210ENST00000564409 DBNDD2Q9BQY9 259 aa18.39■□□□□ 0.53
SPG7-210ENST00000564409 TBC1D2Q9BYX2 928 aa18.39■□□□□ 0.53
SPG7-210ENST00000564409 ZHX2Q9Y6X8 837 aa18.39■□□□□ 0.53
SPG7-210ENST00000564409 PHIPQ8WWQ0 1821 aa18.38■□□□□ 0.53
SPG7-210ENST00000564409 A0A0G2JLL6 359 aaPredicted RBP18.38■□□□□ 0.53
SPG7-210ENST00000564409 PPP4CP60510 307 aa18.38■□□□□ 0.53
SPG7-210ENST00000564409 MOGSQ13724 837 aa18.38■□□□□ 0.53
SPG7-210ENST00000564409 HSP90AB4PQ58FF6 505 aa18.38■□□□□ 0.53
SPG7-210ENST00000564409 NAA16Q6N069 864 aaPredicted RBP18.38■□□□□ 0.53
SPG7-210ENST00000564409 PRRT2Q7Z6L0 340 aaPredicted RBP18.38■□□□□ 0.53
SPG7-210ENST00000564409 OSBPL5Q9H0X9 879 aaPredicted RBP18.38■□□□□ 0.53
SPG7-210ENST00000564409 DHX36Q9H2U1 1008 aaKnown RBP18.38■□□□□ 0.53
SPG7-210ENST00000564409 AFG3L2Q9Y4W6 797 aa18.38■□□□□ 0.53
SPG7-210ENST00000564409 TNRC18O15417 2968 aaPredicted RBP18.38■□□□□ 0.53
SPG7-210ENST00000564409 HOXD10P28358 340 aa18.37■□□□□ 0.53
SPG7-210ENST00000564409 CAP1Q01518 475 aa18.37■□□□□ 0.53
SPG7-210ENST00000564409 SLC9C1Q4G0N8 1177 aa18.37■□□□□ 0.53
SPG7-210ENST00000564409 CERS3Q8IU89 383 aa18.37■□□□□ 0.53
SPG7-210ENST00000564409 TEX11Q8IYF3 940 aa18.37■□□□□ 0.53
SPG7-210ENST00000564409 C1orf115Q9H7X2 142 aa18.37■□□□□ 0.53
SPG7-210ENST00000564409 HERC5Q9UII4 1024 aaKnown RBP18.37■□□□□ 0.53
SPG7-210ENST00000564409 FOCADQ5VW36 1801 aa18.36■□□□□ 0.53
SPG7-210ENST00000564409 CEP85Q6P2H3 762 aa18.36■□□□□ 0.53
SPG7-210ENST00000564409 ADGRA2Q96PE1 1338 aa18.36■□□□□ 0.53
SPG7-210ENST00000564409 TMEM106CQ9BVX2 250 aa18.36■□□□□ 0.53
SPG7-210ENST00000564409 CHMP4BQ9H444 224 aaKnown RBP18.36■□□□□ 0.53
SPG7-210ENST00000564409 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.36■□□□□ 0.53
SPG7-210ENST00000564409 CDK5RAP2Q96SN8 1893 aa18.35■□□□□ 0.53
SPG7-210ENST00000564409 MYO5AQ9Y4I1 1855 aaKnown RBP18.35■□□□□ 0.53
SPG7-210ENST00000564409 CYP2E1P05181 493 aaPredicted RBP18.35■□□□□ 0.53
SPG7-210ENST00000564409 PRPF38BQ5VTL8 546 aaKnown RBP18.35■□□□□ 0.53
SPG7-210ENST00000564409 GPAT2Q6NUI2 795 aa18.35■□□□□ 0.53
SPG7-210ENST00000564409 ZNF333Q96JL9 665 aa18.35■□□□□ 0.53
SPG7-210ENST00000564409 SNRKQ9NRH2 765 aa18.35■□□□□ 0.53
SPG7-210ENST00000564409 PI4KBQ9UBF8 816 aa18.35■□□□□ 0.53
SPG7-210ENST00000564409 CPA4Q9UI42 421 aa18.35■□□□□ 0.53
SPG7-210ENST00000564409 DBNLQ9UJU6 430 aaKnown RBP18.35■□□□□ 0.53
SPG7-210ENST00000564409 PTCH2Q9Y6C5 1203 aa18.35■□□□□ 0.53
SPG7-210ENST00000564409 ATAD5Q96QE3 1844 aa18.35■□□□□ 0.53
SPG7-210ENST00000564409 HTTP42858 3142 aa18.34■□□□□ 0.53
SPG7-210ENST00000564409 MGAMO43451 1857 aa18.33■□□□□ 0.53
SPG7-210ENST00000564409 BCRP11274 1271 aa18.33■□□□□ 0.52
SPG7-210ENST00000564409 PSMC4P43686 418 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms