RNA–Protein interactions for RNA: ENST00000564313.1

PKD1-227, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 4

Gene PKD1, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-227ENST00000564313 NBPF12Q5TAG4 269 aaPredicted RBP22.15■■□□□ 1.14
PKD1-227ENST00000564313 MOB2Q70IA6 237 aa22.15■■□□□ 1.14
PKD1-227ENST00000564313 SALL3Q9BXA9 1300 aa22.14■■□□□ 1.14
PKD1-227ENST00000564313 KIF23Q02241 960 aaPredicted RBP22.14■■□□□ 1.13
PKD1-227ENST00000564313 MAP3K11Q16584 847 aa22.14■■□□□ 1.13
PKD1-227ENST00000564313 SLC9C2Q5TAH2 1124 aa22.14■■□□□ 1.13
PKD1-227ENST00000564313 ZSCAN25Q6NSZ9 544 aa22.14■■□□□ 1.13
PKD1-227ENST00000564313 RGMBQ6NW40 437 aa22.14■■□□□ 1.13
PKD1-227ENST00000564313 CHD1LQ86WJ1 897 aa22.14■■□□□ 1.13
PKD1-227ENST00000564313 RNF186Q9NXI6 227 aa22.14■■□□□ 1.13
PKD1-227ENST00000564313 AATFQ9NY61 560 aaKnown RBP eCLIP22.14■■□□□ 1.13
PKD1-227ENST00000564313 SSC5DA1L4H1 1573 aa22.13■■□□□ 1.13
PKD1-227ENST00000564313 WDHD1O75717 1129 aaPredicted RBP22.13■■□□□ 1.13
PKD1-227ENST00000564313 TRPA1O75762 1119 aa22.13■■□□□ 1.13
PKD1-227ENST00000564313 PDE6AP16499 860 aa22.13■■□□□ 1.13
PKD1-227ENST00000564313 IREB2P48200 963 aaKnown RBP22.13■■□□□ 1.13
PKD1-227ENST00000564313 NFIAQ12857 509 aa22.13■■□□□ 1.13
PKD1-227ENST00000564313 B4GALNT3Q6L9W6 998 aa22.13■■□□□ 1.13
PKD1-227ENST00000564313 LNPKQ9C0E8 428 aa22.13■■□□□ 1.13
PKD1-227ENST00000564313 FAM198AQ9UFP1 575 aa22.13■■□□□ 1.13
PKD1-227ENST00000564313 STAP2Q9UGK3 403 aa22.13■■□□□ 1.13
PKD1-227ENST00000564313 MYH7P12883 1935 aa22.12■■□□□ 1.13
PKD1-227ENST00000564313 COL2A1P02458 1487 aaPredicted RBP22.12■■□□□ 1.13
PKD1-227ENST00000564313 UBE2Q2LH0YL09 131 aa22.12■■□□□ 1.13
PKD1-227ENST00000564313 NEFLP07196 543 aa22.12■■□□□ 1.13
PKD1-227ENST00000564313 RGS3P49796 1198 aa22.12■■□□□ 1.13
PKD1-227ENST00000564313 ZNF157P51786 506 aaPredicted RBP22.12■■□□□ 1.13
PKD1-227ENST00000564313 TCP10Q12799 353 aa22.12■■□□□ 1.13
PKD1-227ENST00000564313 LRRFIP1Q32MZ4 808 aaKnown RBP22.12■■□□□ 1.13
PKD1-227ENST00000564313 DCAF15Q66K64 600 aa22.12■■□□□ 1.13
PKD1-227ENST00000564313 ADGRA1Q86SQ6 560 aa22.12■■□□□ 1.13
PKD1-227ENST00000564313 TEX11Q8IYF3 940 aa22.12■■□□□ 1.13
PKD1-227ENST00000564313 PI4K2BQ8TCG2 481 aa22.12■■□□□ 1.13
PKD1-227ENST00000564313 ANGEL1Q9UNK9 670 aaKnown RBP22.12■■□□□ 1.13
PKD1-227ENST00000564313 PRKG1Q13976 671 aa22.11■■□□□ 1.13
PKD1-227ENST00000564313 TSHZ3Q63HK5 1081 aa22.11■■□□□ 1.13
PKD1-227ENST00000564313 OTUD7AQ8TE49 926 aaPredicted RBP22.11■■□□□ 1.13
PKD1-227ENST00000564313 CCDC102AQ96A19 550 aa22.11■■□□□ 1.13
PKD1-227ENST00000564313 EDC3Q96F86 508 aaKnown RBP22.11■■□□□ 1.13
PKD1-227ENST00000564313 AK9Q5TCS8 1911 aa22.1■■□□□ 1.13
PKD1-227ENST00000564313 PDE1AP54750 535 aa22.1■■□□□ 1.13
PKD1-227ENST00000564313 PICALMQ13492 652 aa22.1■■□□□ 1.13
PKD1-227ENST00000564313 UBE3CQ15386 1083 aa22.1■■□□□ 1.13
PKD1-227ENST00000564313 CTU1Q7Z7A3 348 aaKnown RBP22.1■■□□□ 1.13
PKD1-227ENST00000564313 KBTBD3Q8NAB2 608 aa22.1■■□□□ 1.13
PKD1-227ENST00000564313 SH3RF3Q8TEJ3 882 aaPredicted RBP22.1■■□□□ 1.13
PKD1-227ENST00000564313 FOCADQ5VW36 1801 aa22.1■■□□□ 1.13
PKD1-227ENST00000564313 ZNF532Q9HCE3 1301 aa22.09■■□□□ 1.13
PKD1-227ENST00000564313 ADD2P35612 726 aa22.09■■□□□ 1.13
PKD1-227ENST00000564313 LDLRAD1Q5T700 205 aa22.09■■□□□ 1.13
PKD1-227ENST00000564313 CDAN1Q8IWY9 1227 aa22.09■■□□□ 1.13
PKD1-227ENST00000564313 FZD1Q9UP38 647 aa22.09■■□□□ 1.13
PKD1-227ENST00000564313 ATRNL1Q5VV63 1379 aa22.09■■□□□ 1.13
PKD1-227ENST00000564313 MAGEB6P1A0A0J9YX57 407 aa22.08■■□□□ 1.13
PKD1-227ENST00000564313 TCRBV5S4A2TA0A5A2 114 aa22.08■■□□□ 1.13
PKD1-227ENST00000564313 ZFYP08048 801 aaPredicted RBP22.08■■□□□ 1.13
PKD1-227ENST00000564313 ZSCAN29Q8IWY8 852 aaPredicted RBP22.08■■□□□ 1.13
PKD1-227ENST00000564313 ANKRD13AQ8IZ07 590 aa22.08■■□□□ 1.13
PKD1-227ENST00000564313 MIGA1Q8NAN2 632 aa22.08■■□□□ 1.13
PKD1-227ENST00000564313 OSBPL5Q9H0X9 879 aaPredicted RBP22.08■■□□□ 1.13
PKD1-227ENST00000564313 DDX4Q9NQI0 724 aaKnown RBP22.08■■□□□ 1.13
PKD1-227ENST00000564313 CDK5RAP2Q96SN8 1893 aa22.07■■□□□ 1.12
PKD1-227ENST00000564313 USP2O75604 605 aaPredicted RBP22.07■■□□□ 1.12
PKD1-227ENST00000564313 SLC10A3P09131 477 aa22.07■■□□□ 1.12
PKD1-227ENST00000564313 CSRNP1Q96S65 589 aa22.07■■□□□ 1.12
PKD1-227ENST00000564313 ZNF341Q9BYN7 854 aa22.07■■□□□ 1.12
PKD1-227ENST00000564313 DHX36Q9H2U1 1008 aaKnown RBP22.07■■□□□ 1.12
PKD1-227ENST00000564313 HPS5Q9UPZ3 1129 aa22.07■■□□□ 1.12
PKD1-227ENST00000564313 RASAL3Q86YV0 1011 aa22.06■■□□□ 1.12
PKD1-227ENST00000564313 RIOK1Q9BRS2 568 aaKnown RBP22.06■■□□□ 1.12
PKD1-227ENST00000564313 OSBPL3Q9H4L5 887 aa22.06■■□□□ 1.12
PKD1-227ENST00000564313 DYNLL1P63167 89 aaKnown RBP22.05■■□□□ 1.12
PKD1-227ENST00000564313 TICAM2Q86XR7 235 aa22.05■■□□□ 1.12
PKD1-227ENST00000564313 ZFPM1Q8IX07 1006 aa22.05■■□□□ 1.12
PKD1-227ENST00000564313 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.05■■□□□ 1.12
PKD1-227ENST00000564313 TGFBRAP1Q8WUH2 860 aa22.05■■□□□ 1.12
PKD1-227ENST00000564313 CRNKL1Q9BZJ0 848 aaKnown RBP22.05■■□□□ 1.12
PKD1-227ENST00000564313 FLT1P17948 1338 aa22.05■■□□□ 1.12
PKD1-227ENST00000564313 USP5P45974 858 aa22.04■■□□□ 1.12
PKD1-227ENST00000564313 MAP3K9P80192 1104 aa22.04■■□□□ 1.12
PKD1-227ENST00000564313 PLEKHM2Q8IWE5 1019 aa22.04■■□□□ 1.12
PKD1-227ENST00000564313 EVI5LQ96CN4 794 aa22.04■■□□□ 1.12
PKD1-227ENST00000564313 SLC10A4Q96EP9 437 aa22.04■■□□□ 1.12
PKD1-227ENST00000564313 CSADQ9Y600 493 aa22.04■■□□□ 1.12
PKD1-227ENST00000564313 OTOFQ9HC10 1997 aa22.04■■□□□ 1.12
PKD1-227ENST00000564313 DDTLA6NHG4 134 aaPredicted RBP22.03■■□□□ 1.12
PKD1-227ENST00000564313 RNF113AO15541 343 aaKnown RBP22.03■■□□□ 1.12
PKD1-227ENST00000564313 SH3BP5LQ7L8J4 393 aa22.03■■□□□ 1.12
PKD1-227ENST00000564313 REM2Q8IYK8 340 aaPredicted RBP22.03■■□□□ 1.12
PKD1-227ENST00000564313 WRNIP1Q96S55 665 aa22.03■■□□□ 1.12
PKD1-227ENST00000564313 FSD1Q9BTV5 496 aa22.03■■□□□ 1.12
PKD1-227ENST00000564313 TBC1D12O60347 775 aa22.02■■□□□ 1.12
PKD1-227ENST00000564313 MAP3K10Q02779 954 aa22.02■■□□□ 1.12
PKD1-227ENST00000564313 MIGA2Q7L4E1 593 aa22.02■■□□□ 1.12
PKD1-227ENST00000564313 MAPKAPK5Q8IW41 473 aa22.02■■□□□ 1.12
PKD1-227ENST00000564313 APPBP2Q92624 585 aa22.02■■□□□ 1.12
PKD1-227ENST00000564313 PI4KBQ9UBF8 816 aa22.02■■□□□ 1.12
PKD1-227ENST00000564313 HLA-DOAP06340 250 aa22.01■■□□□ 1.11
PKD1-227ENST00000564313 ZBTB48P10074 688 aaPredicted RBP22.01■■□□□ 1.11
PKD1-227ENST00000564313 CENPQQ7L2Z9 268 aaPredicted RBP22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms