RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 ALAS2P22557 587 aa3.77□□□□□ -1.81
CHD9-209ENST00000564255 ARL4DP49703 201 aa3.77□□□□□ -1.81
CHD9-209ENST00000564255 KIF4BQ2VIQ3 1234 aa3.77□□□□□ -1.81
CHD9-209ENST00000564255 TMEM201Q5SNT2 666 aa3.77□□□□□ -1.81
CHD9-209ENST00000564255 FBXW10Q5XX13 1052 aa3.77□□□□□ -1.81
CHD9-209ENST00000564255 CYFIP1Q7L576 1253 aa3.77□□□□□ -1.81
CHD9-209ENST00000564255 GOLGA6L1Q8N7Z2 621 aa3.77□□□□□ -1.81
CHD9-209ENST00000564255 MICAL1Q8TDZ2 1067 aa3.77□□□□□ -1.81
CHD9-209ENST00000564255 TMEM40Q8WWA1 233 aa3.77□□□□□ -1.81
CHD9-209ENST00000564255 TMEM260Q9NX78 707 aa3.77□□□□□ -1.81
CHD9-209ENST00000564255 IGF1RP08069 1367 aa3.76□□□□□ -1.81
CHD9-209ENST00000564255 GRIN3BO60391 1043 aa3.76□□□□□ -1.81
CHD9-209ENST00000564255 ECEL1O95672 775 aa3.76□□□□□ -1.81
CHD9-209ENST00000564255 CYP11A1P05108 521 aa3.76□□□□□ -1.81
CHD9-209ENST00000564255 IFRD2Q12894 506 aaPredicted RBP3.76□□□□□ -1.81
CHD9-209ENST00000564255 POU4F3Q15319 338 aa3.76□□□□□ -1.81
CHD9-209ENST00000564255 PTPROQ16827 1216 aa3.76□□□□□ -1.81
CHD9-209ENST00000564255 KCNB2Q92953 911 aa3.76□□□□□ -1.81
CHD9-209ENST00000564255 PRDM6Q9NQX0 595 aa3.76□□□□□ -1.81
CHD9-209ENST00000564255 ST7Q9NRC1 585 aa3.76□□□□□ -1.81
CHD9-209ENST00000564255 PCDHA4Q9UN74 947 aa3.76□□□□□ -1.81
CHD9-209ENST00000564255 H3BM21 787 aa3.76□□□□□ -1.81
CHD9-209ENST00000564255 LINC01387J3KSC0 135 aa3.76□□□□□ -1.81
CHD9-209ENST00000564255 HTR3BO95264 441 aa3.76□□□□□ -1.81
CHD9-209ENST00000564255 EPXP11678 715 aa3.76□□□□□ -1.81
CHD9-209ENST00000564255 GUCY2CP25092 1073 aa3.76□□□□□ -1.81
CHD9-209ENST00000564255 AFF1P51825 1210 aaKnown RBP3.76□□□□□ -1.81
CHD9-209ENST00000564255 INPP5AQ14642 412 aa3.76□□□□□ -1.81
CHD9-209ENST00000564255 C2orf27AQ580R0 203 aa3.76□□□□□ -1.81
CHD9-209ENST00000564255 XP32Q5T750 250 aa3.76□□□□□ -1.81
CHD9-209ENST00000564255 RUFY4Q6ZNE9 571 aa3.76□□□□□ -1.81
CHD9-209ENST00000564255 ANTXR1Q9H6X2 564 aa3.76□□□□□ -1.81
CHD9-209ENST00000564255 ESYT3A0FGR9 886 aa3.75□□□□□ -1.81
CHD9-209ENST00000564255 TNFRSF10CO14798 259 aa3.75□□□□□ -1.81
CHD9-209ENST00000564255 FSCN2O14926 492 aa3.75□□□□□ -1.81
CHD9-209ENST00000564255 INTS3Q68E01 1043 aaKnown RBP3.75□□□□□ -1.81
CHD9-209ENST00000564255 ZSCAN1Q8NBB4 408 aa3.75□□□□□ -1.81
CHD9-209ENST00000564255 ST13P5Q8NFI4 369 aaPredicted RBP3.75□□□□□ -1.81
CHD9-209ENST00000564255 APPBP2Q92624 585 aa3.75□□□□□ -1.81
CHD9-209ENST00000564255 PLPPR2Q96GM1 343 aa3.75□□□□□ -1.81
CHD9-209ENST00000564255 TMX1Q9H3N1 280 aa3.75□□□□□ -1.81
CHD9-209ENST00000564255 GDF2Q9UK05 429 aaPredicted RBP3.75□□□□□ -1.81
CHD9-209ENST00000564255 ADAM30Q9UKF2 790 aa3.75□□□□□ -1.81
CHD9-209ENST00000564255 PCDHGC5Q9Y5F6 944 aa3.75□□□□□ -1.81
CHD9-209ENST00000564255 SYNGAP1Q96PV0 1343 aa3.75□□□□□ -1.81
CHD9-209ENST00000564255 SLC22A31A6NKX4 558 aa3.75□□□□□ -1.81
CHD9-209ENST00000564255 CDC45O75419 566 aa3.75□□□□□ -1.81
CHD9-209ENST00000564255 ALBP02768 609 aa3.75□□□□□ -1.81
CHD9-209ENST00000564255 NME1P15531 152 aaKnown RBP3.75□□□□□ -1.81
CHD9-209ENST00000564255 MAOBP27338 520 aa3.75□□□□□ -1.81
CHD9-209ENST00000564255 RING1Q06587 406 aa3.75□□□□□ -1.81
CHD9-209ENST00000564255 SQSTM1Q13501 440 aa3.75□□□□□ -1.81
CHD9-209ENST00000564255 SUZ12Q15022 739 aaKnown RBP3.75□□□□□ -1.81
CHD9-209ENST00000564255 WIPI1Q5MNZ9 446 aaPredicted RBP3.75□□□□□ -1.81
CHD9-209ENST00000564255 CDCP2Q5VXM1 449 aa3.75□□□□□ -1.81
CHD9-209ENST00000564255 LARP1BQ659C4 914 aaKnown RBP3.75□□□□□ -1.81
CHD9-209ENST00000564255 MSL1Q68DK7 614 aa3.75□□□□□ -1.81
CHD9-209ENST00000564255 FAM117BQ6P1L5 589 aa3.75□□□□□ -1.81
CHD9-209ENST00000564255 HDXQ7Z353 690 aa3.75□□□□□ -1.81
CHD9-209ENST00000564255 KIAA0907Q7Z7F0 614 aaPredicted RBP3.75□□□□□ -1.81
CHD9-209ENST00000564255 TTC6Q86TZ1 520 aa3.75□□□□□ -1.81
CHD9-209ENST00000564255 HOMER1Q86YM7 354 aa3.75□□□□□ -1.81
CHD9-209ENST00000564255 FAM178BQ8IXR5 827 aa3.75□□□□□ -1.81
CHD9-209ENST00000564255 THAP3Q8WTV1 239 aaPredicted RBP3.75□□□□□ -1.81
CHD9-209ENST00000564255 NUDT8Q8WV74 236 aa3.75□□□□□ -1.81
CHD9-209ENST00000564255 CORO1BQ9BR76 489 aa3.75□□□□□ -1.81
CHD9-209ENST00000564255 CNNM2Q9H8M5 875 aa3.75□□□□□ -1.81
CHD9-209ENST00000564255 GMIPQ9P107 970 aa3.75□□□□□ -1.81
CHD9-209ENST00000564255 NXF1Q9UBU9 619 aaKnown RBP3.75□□□□□ -1.81
CHD9-209ENST00000564255 PRKAB1Q9Y478 270 aa3.75□□□□□ -1.81
CHD9-209ENST00000564255 SLC12A7Q9Y666 1083 aa3.75□□□□□ -1.81
CHD9-209ENST00000564255 ACRP10323 421 aa3.74□□□□□ -1.81
CHD9-209ENST00000564255 CHMP4BP1P59074 171 aa3.74□□□□□ -1.81
CHD9-209ENST00000564255 RNF187Q5TA31 235 aaPredicted RBP3.74□□□□□ -1.81
CHD9-209ENST00000564255 OVOS1Q6IE37 1185 aa3.74□□□□□ -1.81
CHD9-209ENST00000564255 ATG4CQ96DT6 458 aa3.74□□□□□ -1.81
CHD9-209ENST00000564255 JPH1Q9HDC5 661 aaPredicted RBP3.74□□□□□ -1.81
CHD9-209ENST00000564255 FANCLQ9NW38 375 aa3.74□□□□□ -1.81
CHD9-209ENST00000564255 CORINQ9Y5Q5 1042 aa3.74□□□□□ -1.81
CHD9-209ENST00000564255 B2RBV5 119 aa3.74□□□□□ -1.81
CHD9-209ENST00000564255 DNAJA2O60884 412 aa3.74□□□□□ -1.81
CHD9-209ENST00000564255 ARSHQ5FYA8 562 aa3.74□□□□□ -1.81
CHD9-209ENST00000564255 MRM1Q6IN84 353 aaKnown RBP3.74□□□□□ -1.81
CHD9-209ENST00000564255 TXNDC11Q6PKC3 985 aa3.74□□□□□ -1.81
CHD9-209ENST00000564255 C1orf229Q6ZS94 237 aaPredicted RBP3.74□□□□□ -1.81
CHD9-209ENST00000564255 MAP4K3Q8IVH8 894 aa3.74□□□□□ -1.81
CHD9-209ENST00000564255 KLHL23Q8NBE8 558 aa3.74□□□□□ -1.81
CHD9-209ENST00000564255 SLC7A3Q8WY07 619 aa3.74□□□□□ -1.81
CHD9-209ENST00000564255 ACDQ96AP0 544 aa3.74□□□□□ -1.81
CHD9-209ENST00000564255 WDR89Q96FK6 387 aaPredicted RBP3.74□□□□□ -1.81
CHD9-209ENST00000564255 ZC3H12CQ9C0D7 883 aaKnown RBP3.74□□□□□ -1.81
CHD9-209ENST00000564255 REV1Q9UBZ9 1251 aa3.74□□□□□ -1.81
CHD9-209ENST00000564255 ZMYM5Q9UJ78 669 aa3.74□□□□□ -1.81
CHD9-209ENST00000564255 LIG1P18858 919 aa3.73□□□□□ -1.81
CHD9-209ENST00000564255 SRSF11Q05519 484 aaKnown RBP3.73□□□□□ -1.81
CHD9-209ENST00000564255 COL9A3Q14050 684 aaPredicted RBP3.73□□□□□ -1.81
CHD9-209ENST00000564255 ZC3H12AQ5D1E8 599 aaKnown RBP3.73□□□□□ -1.81
CHD9-209ENST00000564255 RNFT1Q5M7Z0 435 aa3.73□□□□□ -1.81
CHD9-209ENST00000564255 UNC5AQ6ZN44 842 aa3.73□□□□□ -1.81
CHD9-209ENST00000564255 WFDC8Q8IUA0 241 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms