RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 C17orf99Q6UX52 265 aa20.64■□□□□ 0.89
CCNF-203ENST00000564236 MIER1Q8N108 512 aa20.64■□□□□ 0.89
CCNF-203ENST00000564236 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.64■□□□□ 0.89
CCNF-203ENST00000564236 NSUN4Q96CB9 384 aaKnown RBP20.64■□□□□ 0.89
CCNF-203ENST00000564236 NEUROD6Q96NK8 337 aa20.64■□□□□ 0.89
CCNF-203ENST00000564236 DDX4Q9NQI0 724 aaKnown RBP20.64■□□□□ 0.89
CCNF-203ENST00000564236 BRCA2P51587 3418 aa20.64■□□□□ 0.89
CCNF-203ENST00000564236 UQCRFS1P1P0C7P4 283 aa20.63■□□□□ 0.89
CCNF-203ENST00000564236 LACTBP83111 547 aaPredicted RBP20.63■□□□□ 0.89
CCNF-203ENST00000564236 ATP8B2P98198 1209 aa20.63■□□□□ 0.89
CCNF-203ENST00000564236 HNRNPUQ00839 825 aaKnown RBP eCLIP20.63■□□□□ 0.89
CCNF-203ENST00000564236 SCYL3Q8IZE3 742 aa20.63■□□□□ 0.89
CCNF-203ENST00000564236 DDTLA6NHG4 134 aaPredicted RBP20.62■□□□□ 0.89
CCNF-203ENST00000564236 TBC1D12O60347 775 aa20.62■□□□□ 0.89
CCNF-203ENST00000564236 SLC34A2O95436 690 aa20.62■□□□□ 0.89
CCNF-203ENST00000564236 MCAMP43121 646 aa20.62■□□□□ 0.89
CCNF-203ENST00000564236 GSTO1P78417 241 aa20.62■□□□□ 0.89
CCNF-203ENST00000564236 ZNF512BQ96KM6 892 aaPredicted RBP20.62■□□□□ 0.89
CCNF-203ENST00000564236 NOP58Q9Y2X3 529 aaKnown RBP20.62■□□□□ 0.89
CCNF-203ENST00000564236 MYH2Q9UKX2 1941 aa20.62■□□□□ 0.89
CCNF-203ENST00000564236 ZBTB7BO15156 539 aaPredicted RBP20.61■□□□□ 0.89
CCNF-203ENST00000564236 LDHCP07864 332 aa20.61■□□□□ 0.89
CCNF-203ENST00000564236 GORABQ5T7V8 394 aa20.61■□□□□ 0.89
CCNF-203ENST00000564236 PRPF38BQ5VTL8 546 aaKnown RBP20.61■□□□□ 0.89
CCNF-203ENST00000564236 PI16Q6UXB8 463 aa20.61■□□□□ 0.89
CCNF-203ENST00000564236 ZNF333Q96JL9 665 aa20.61■□□□□ 0.89
CCNF-203ENST00000564236 RBBP6Q7Z6E9 1792 aaKnown RBP20.61■□□□□ 0.89
CCNF-203ENST00000564236 PDE4DIPQ5VU43 2346 aa20.6■□□□□ 0.89
CCNF-203ENST00000564236 DOCK2Q92608 1830 aa20.6■□□□□ 0.89
CCNF-203ENST00000564236 ZBED9Q6R2W3 1325 aa20.6■□□□□ 0.89
CCNF-203ENST00000564236 PDHXO00330 501 aa20.6■□□□□ 0.89
CCNF-203ENST00000564236 CTNND1O60716 968 aaKnown RBP20.6■□□□□ 0.89
CCNF-203ENST00000564236 PTPRAP18433 802 aa20.6■□□□□ 0.89
CCNF-203ENST00000564236 PRMT2P55345 433 aa20.6■□□□□ 0.89
CCNF-203ENST00000564236 TNNI3KQ59H18 835 aa20.6■□□□□ 0.89
CCNF-203ENST00000564236 AFG3L2Q9Y4W6 797 aa20.6■□□□□ 0.89
CCNF-203ENST00000564236 FPGT-TNNI3KV9GXZ4 949 aa20.6■□□□□ 0.89
CCNF-203ENST00000564236 A0A0G2JLL6 359 aaPredicted RBP20.59■□□□□ 0.89
CCNF-203ENST00000564236 POTEFA5A3E0 1075 aa20.59■□□□□ 0.89
CCNF-203ENST00000564236 RLBP1P12271 317 aa20.59■□□□□ 0.89
CCNF-203ENST00000564236 DIEXFQ68CQ4 756 aaKnown RBP20.59■□□□□ 0.89
CCNF-203ENST00000564236 GPAT2Q6NUI2 795 aa20.59■□□□□ 0.89
CCNF-203ENST00000564236 PRRT2Q7Z6L0 340 aaPredicted RBP20.59■□□□□ 0.89
CCNF-203ENST00000564236 SLC45A1Q9Y2W3 748 aa20.59■□□□□ 0.89
CCNF-203ENST00000564236 PTCH2Q9Y6C5 1203 aa20.59■□□□□ 0.89
CCNF-203ENST00000564236 KIF22Q14807 665 aa20.58■□□□□ 0.89
CCNF-203ENST00000564236 TBC1D9Q6ZT07 1266 aa20.58■□□□□ 0.89
CCNF-203ENST00000564236 ZSCAN29Q8IWY8 852 aaPredicted RBP20.58■□□□□ 0.89
CCNF-203ENST00000564236 FTSJ3Q8IY81 847 aaKnown RBP20.58■□□□□ 0.89
CCNF-203ENST00000564236 ARHGAP39Q9C0H5 1083 aa20.58■□□□□ 0.89
CCNF-203ENST00000564236 PICK1Q9NRD5 415 aa20.58■□□□□ 0.89
CCNF-203ENST00000564236 MKI67P46013 3256 aaKnown RBP20.58■□□□□ 0.88
CCNF-203ENST00000564236 PICALMQ13492 652 aa20.57■□□□□ 0.88
CCNF-203ENST00000564236 FASTKD5Q7L8L6 764 aaKnown RBP20.57■□□□□ 0.88
CCNF-203ENST00000564236 NBPF11Q86T75 865 aa20.57■□□□□ 0.88
CCNF-203ENST00000564236 PARK7Q99497 189 aaKnown RBP20.57■□□□□ 0.88
CCNF-203ENST00000564236 ZHX2Q9Y6X8 837 aa20.57■□□□□ 0.88
CCNF-203ENST00000564236 BCRP11274 1271 aa20.56■□□□□ 0.88
CCNF-203ENST00000564236 SLC9C1Q4G0N8 1177 aa20.56■□□□□ 0.88
CCNF-203ENST00000564236 DBNDD2Q9BQY9 259 aa20.56■□□□□ 0.88
CCNF-203ENST00000564236 OSBPL5Q9H0X9 879 aaPredicted RBP20.56■□□□□ 0.88
CCNF-203ENST00000564236 SURF6O75683 361 aaKnown RBP20.55■□□□□ 0.88
CCNF-203ENST00000564236 CTGFP29279 349 aa20.55■□□□□ 0.88
CCNF-203ENST00000564236 PPP4CP60510 307 aa20.55■□□□□ 0.88
CCNF-203ENST00000564236 CCDC158Q5M9N0 1113 aa20.55■□□□□ 0.88
CCNF-203ENST00000564236 ITPRIPQ8IWB1 547 aa20.55■□□□□ 0.88
CCNF-203ENST00000564236 RAI14Q9P0K7 980 aa20.55■□□□□ 0.88
CCNF-203ENST00000564236 LRP2BPQ9P2M1 347 aa20.55■□□□□ 0.88
CCNF-203ENST00000564236 CPA4Q9UI42 421 aa20.55■□□□□ 0.88
CCNF-203ENST00000564236 SLURP2P0DP57 97 aa20.54■□□□□ 0.88
CCNF-203ENST00000564236 TRIM47Q96LD4 638 aa20.54■□□□□ 0.88
CCNF-203ENST00000564236 TBC1D2Q9BYX2 928 aa20.54■□□□□ 0.88
CCNF-203ENST00000564236 SRRDQ9UH36 339 aa20.54■□□□□ 0.88
CCNF-203ENST00000564236 CYP2E1P05181 493 aaPredicted RBP20.53■□□□□ 0.88
CCNF-203ENST00000564236 TTC39AQ5SRH9 613 aa20.53■□□□□ 0.88
CCNF-203ENST00000564236 METTL16Q86W50 562 aaKnown RBP20.53■□□□□ 0.88
CCNF-203ENST00000564236 C1orf115Q9H7X2 142 aa20.53■□□□□ 0.88
CCNF-203ENST00000564236 HERC5Q9UII4 1024 aaKnown RBP20.53■□□□□ 0.88
CCNF-203ENST00000564236 DBNLQ9UJU6 430 aaKnown RBP20.53■□□□□ 0.88
CCNF-203ENST00000564236 DOCK1Q14185 1865 aa20.52■□□□□ 0.88
CCNF-203ENST00000564236 MAST2Q6P0Q8 1798 aa20.52■□□□□ 0.88
CCNF-203ENST00000564236 PLCG2P16885 1265 aa20.52■□□□□ 0.88
CCNF-203ENST00000564236 PSMC4P43686 418 aa20.52■□□□□ 0.88
CCNF-203ENST00000564236 OS9Q13438 667 aaPredicted RBP20.52■□□□□ 0.88
CCNF-203ENST00000564236 CEP85Q6P2H3 762 aa20.52■□□□□ 0.88
CCNF-203ENST00000564236 TMEM106CQ9BVX2 250 aa20.52■□□□□ 0.88
CCNF-203ENST00000564236 DHX36Q9H2U1 1008 aaKnown RBP20.52■□□□□ 0.88
CCNF-203ENST00000564236 BAG3O95817 575 aa20.51■□□□□ 0.87
CCNF-203ENST00000564236 CYP2C8P10632 490 aa20.51■□□□□ 0.87
CCNF-203ENST00000564236 EN2P19622 333 aaPredicted RBP20.51■□□□□ 0.87
CCNF-203ENST00000564236 HOXD10P28358 340 aa20.51■□□□□ 0.87
CCNF-203ENST00000564236 NAA16Q6N069 864 aaPredicted RBP20.51■□□□□ 0.87
CCNF-203ENST00000564236 TMED8Q6PL24 325 aaPredicted RBP20.51■□□□□ 0.87
CCNF-203ENST00000564236 TEX11Q8IYF3 940 aa20.51■□□□□ 0.87
CCNF-203ENST00000564236 SH3RF3Q8TEJ3 882 aaPredicted RBP20.51■□□□□ 0.87
CCNF-203ENST00000564236 EAF2Q96CJ1 260 aaPredicted RBP20.51■□□□□ 0.87
CCNF-203ENST00000564236 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.51■□□□□ 0.87
CCNF-203ENST00000564236 AK9Q5TCS8 1911 aa20.51■□□□□ 0.87
CCNF-203ENST00000564236 ZSWIM8A7E2V4 1837 aa20.5■□□□□ 0.87
CCNF-203ENST00000564236 PHIPQ8WWQ0 1821 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms