RNA–Protein interactions for RNA: ENST00000563941.5

MSLN-205, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,109 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-205ENST00000563941 PNPLA7Q6ZV29 1317 aa23.15■■□□□ 1.3
MSLN-205ENST00000563941 MYH14Q7Z406 1995 aaKnown RBP23.14■■□□□ 1.3
MSLN-205ENST00000563941 LTBP4Q8N2S1 1624 aa23.14■■□□□ 1.3
MSLN-205ENST00000563941 LOC102724428A0A0B4J2F2 783 aa23.14■■□□□ 1.3
MSLN-205ENST00000563941 U2AF2P26368 475 aaKnown RBP eCLIP23.14■■□□□ 1.3
MSLN-205ENST00000563941 TDO2P48775 406 aa23.14■■□□□ 1.3
MSLN-205ENST00000563941 SIK1P57059 783 aa23.14■■□□□ 1.3
MSLN-205ENST00000563941 NLRP12P59046 1061 aa23.14■■□□□ 1.3
MSLN-205ENST00000563941 JMYQ8N9B5 988 aa23.14■■□□□ 1.3
MSLN-205ENST00000563941 SLC26A6Q9BXS9 759 aa23.14■■□□□ 1.3
MSLN-205ENST00000563941 NACAP1Q9BZK3 213 aa23.14■■□□□ 1.3
MSLN-205ENST00000563941 SLC4A4Q9Y6R1 1079 aa23.14■■□□□ 1.3
MSLN-205ENST00000563941 BIN1O00499 593 aa23.14■■□□□ 1.29
MSLN-205ENST00000563941 RBM6P78332 1123 aaKnown RBP23.14■■□□□ 1.29
MSLN-205ENST00000563941 SSRP1Q08945 709 aaKnown RBP23.14■■□□□ 1.29
MSLN-205ENST00000563941 ITPK1Q13572 414 aa23.14■■□□□ 1.29
MSLN-205ENST00000563941 STAG1Q8WVM7 1258 aa23.14■■□□□ 1.29
MSLN-205ENST00000563941 MAP3K14Q99558 947 aa23.14■■□□□ 1.29
MSLN-205ENST00000563941 UBE2Q2LH0YL09 131 aa23.13■■□□□ 1.29
MSLN-205ENST00000563941 TIGD1Q96MW7 591 aa23.13■■□□□ 1.29
MSLN-205ENST00000563941 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.13■■□□□ 1.29
MSLN-205ENST00000563941 NID2Q14112 1375 aa23.13■■□□□ 1.29
MSLN-205ENST00000563941 FMNL1O95466 1100 aaPredicted RBP23.12■■□□□ 1.29
MSLN-205ENST00000563941 SYKP43405 635 aa23.12■■□□□ 1.29
MSLN-205ENST00000563941 CHRNDQ07001 517 aa23.12■■□□□ 1.29
MSLN-205ENST00000563941 RRP12Q5JTH9 1297 aaKnown RBP23.12■■□□□ 1.29
MSLN-205ENST00000563941 FILIP1Q7Z7B0 1213 aa23.12■■□□□ 1.29
MSLN-205ENST00000563941 ZNF710Q8N1W2 664 aa23.12■■□□□ 1.29
MSLN-205ENST00000563941 HPSEQ9Y251 543 aa23.12■■□□□ 1.29
MSLN-205ENST00000563941 SPATA31A1Q5TZJ5 1347 aa23.12■■□□□ 1.29
MSLN-205ENST00000563941 SHC4Q6S5L8 630 aa23.12■■□□□ 1.29
MSLN-205ENST00000563941 TOMM22Q9NS69 142 aa23.12■■□□□ 1.29
MSLN-205ENST00000563941 LRP2BPQ9P2M1 347 aa23.12■■□□□ 1.29
MSLN-205ENST00000563941 IFNAR1P17181 557 aa23.11■■□□□ 1.29
MSLN-205ENST00000563941 MIGA1Q8NAN2 632 aa23.11■■□□□ 1.29
MSLN-205ENST00000563941 CICQ96RK0 1608 aaPredicted RBP23.11■■□□□ 1.29
MSLN-205ENST00000563941 TNNT1P13805 278 aa23.11■■□□□ 1.29
MSLN-205ENST00000563941 SART3Q15020 963 aaKnown RBP23.11■■□□□ 1.29
MSLN-205ENST00000563941 TPD52L1Q16890 204 aaPredicted RBP23.11■■□□□ 1.29
MSLN-205ENST00000563941 WASF1Q92558 559 aa23.11■■□□□ 1.29
MSLN-205ENST00000563941 ZKSCAN3Q9BRR0 538 aa23.11■■□□□ 1.29
MSLN-205ENST00000563941 BCL9LQ86UU0 1499 aa23.11■■□□□ 1.29
MSLN-205ENST00000563941 NRAPQ86VF7 1730 aa23.11■■□□□ 1.29
MSLN-205ENST00000563941 COL4A1P02462 1669 aa23.1■■□□□ 1.29
MSLN-205ENST00000563941 WTAPQ15007 396 aa23.1■■□□□ 1.29
MSLN-205ENST00000563941 NBPF11Q86T75 865 aa23.1■■□□□ 1.29
MSLN-205ENST00000563941 MARCH10Q8NA82 808 aaPredicted RBP23.1■■□□□ 1.29
MSLN-205ENST00000563941 BCL2L12Q9HB09 334 aa23.1■■□□□ 1.29
MSLN-205ENST00000563941 THRAP3Q9Y2W1 955 aaKnown RBP23.1■■□□□ 1.29
MSLN-205ENST00000563941 SKILP12757 684 aa23.09■■□□□ 1.29
MSLN-205ENST00000563941 RESP18Q5W5W9 173 aa23.09■■□□□ 1.29
MSLN-205ENST00000563941 FAM237AA0A1B0GTK4 181 aa23.09■■□□□ 1.29
MSLN-205ENST00000563941 CCZ1BP86790 482 aa23.09■■□□□ 1.29
MSLN-205ENST00000563941 CCZ1P86791 482 aaPredicted RBP23.09■■□□□ 1.29
MSLN-205ENST00000563941 RTN1Q16799 776 aa23.09■■□□□ 1.29
MSLN-205ENST00000563941 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.09■■□□□ 1.29
MSLN-205ENST00000563941 CUTAO60888 179 aa23.08■■□□□ 1.29
MSLN-205ENST00000563941 GUCY1A2P33402 732 aa23.08■■□□□ 1.29
MSLN-205ENST00000563941 TPM4P67936 248 aa23.08■■□□□ 1.29
MSLN-205ENST00000563941 STK11IPQ8N1F8 1099 aa23.08■■□□□ 1.29
MSLN-205ENST00000563941 CLIC6Q96NY7 704 aa23.08■■□□□ 1.29
MSLN-205ENST00000563941 TUBE1Q9UJT0 475 aa23.08■■□□□ 1.29
MSLN-205ENST00000563941 IQSEC3Q9UPP2 1182 aaPredicted RBP23.08■■□□□ 1.29
MSLN-205ENST00000563941 ERICH2A1L162 156 aa23.08■■□□□ 1.28
MSLN-205ENST00000563941 SMTNL1A8MU46 457 aa23.08■■□□□ 1.28
MSLN-205ENST00000563941 ADAMTS2O95450 1211 aa23.08■■□□□ 1.28
MSLN-205ENST00000563941 CYP7A1P22680 504 aa23.08■■□□□ 1.28
MSLN-205ENST00000563941 GSDMDP57764 484 aa23.08■■□□□ 1.28
MSLN-205ENST00000563941 NCAPHQ15003 741 aa23.08■■□□□ 1.28
MSLN-205ENST00000563941 NOSTRINQ8IVI9 506 aa23.08■■□□□ 1.28
MSLN-205ENST00000563941 TRIM22Q8IYM9 498 aa23.08■■□□□ 1.28
MSLN-205ENST00000563941 XPO4Q9C0E2 1151 aaKnown RBP23.08■■□□□ 1.28
MSLN-205ENST00000563941 SMC2O95347 1197 aa23.07■■□□□ 1.28
MSLN-205ENST00000563941 MMP1P03956 469 aa23.07■■□□□ 1.28
MSLN-205ENST00000563941 ISM2Q6H9L7 571 aa23.07■■□□□ 1.28
MSLN-205ENST00000563941 CDC5LQ99459 802 aaKnown RBP23.07■■□□□ 1.28
MSLN-205ENST00000563941 MTA3Q9BTC8 594 aa23.07■■□□□ 1.28
MSLN-205ENST00000563941 OSBPL5Q9H0X9 879 aaPredicted RBP23.07■■□□□ 1.28
MSLN-205ENST00000563941 RNF41Q9H4P4 317 aaPredicted RBP23.07■■□□□ 1.28
MSLN-205ENST00000563941 IFNKQ9P0W0 207 aa23.07■■□□□ 1.28
MSLN-205ENST00000563941 IMPACTQ9P2X3 320 aa23.07■■□□□ 1.28
MSLN-205ENST00000563941 CTIFO43310 598 aaKnown RBP23.06■■□□□ 1.28
MSLN-205ENST00000563941 PPARAQ07869 468 aa23.06■■□□□ 1.28
MSLN-205ENST00000563941 ADGRA1Q86SQ6 560 aa23.06■■□□□ 1.28
MSLN-205ENST00000563941 A0A1B0GUL6 1792 aa23.06■■□□□ 1.28
MSLN-205ENST00000563941 BTBD18B2RXH4 712 aa23.06■■□□□ 1.28
MSLN-205ENST00000563941 SAFBQ15424 915 aaKnown RBP eCLIP23.06■■□□□ 1.28
MSLN-205ENST00000563941 TMTC2Q8N394 836 aa23.06■■□□□ 1.28
MSLN-205ENST00000563941 ZNF652Q9Y2D9 606 aa23.06■■□□□ 1.28
MSLN-205ENST00000563941 ZNF804BA4D1E1 1349 aa23.05■■□□□ 1.28
MSLN-205ENST00000563941 USP27XA6NNY8 438 aa23.05■■□□□ 1.28
MSLN-205ENST00000563941 IKBKBO14920 756 aa23.05■■□□□ 1.28
MSLN-205ENST00000563941 PNOCQ13519 176 aa23.05■■□□□ 1.28
MSLN-205ENST00000563941 DIS3L2Q8IYB7 885 aaKnown RBP23.05■■□□□ 1.28
MSLN-205ENST00000563941 ABCF2Q9UG63 623 aa23.05■■□□□ 1.28
MSLN-205ENST00000563941 KCNJ14Q9UNX9 436 aa23.05■■□□□ 1.28
MSLN-205ENST00000563941 PAXBP1Q9Y5B6 917 aa23.05■■□□□ 1.28
MSLN-205ENST00000563941 CCDC196A0A1B0GTZ2 297 aa23.04■■□□□ 1.28
MSLN-205ENST00000563941 ZNF654Q8IZM8 581 aa23.04■■□□□ 1.28
MSLN-205ENST00000563941 KRI1Q8N9T8 703 aaKnown RBP23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms