RNA–Protein interactions for RNA: ENST00000563720.1

MAP1LC3B-204, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 3

Gene MAP1LC3B, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-204ENST00000563720 HOOK2Q96ED9 719 aa21.44■■□□□ 1.02
MAP1LC3B-204ENST00000563720 FAM163AQ96GL9 167 aaPredicted RBP21.44■■□□□ 1.02
MAP1LC3B-204ENST00000563720 FAM198AQ9UFP1 575 aa21.44■■□□□ 1.02
MAP1LC3B-204ENST00000563720 FPGT-TNNI3KV9GXZ4 949 aa21.44■■□□□ 1.02
MAP1LC3B-204ENST00000563720 RFX7Q2KHR2 1363 aa21.44■■□□□ 1.02
MAP1LC3B-204ENST00000563720 BRCA2P51587 3418 aa21.43■■□□□ 1.02
MAP1LC3B-204ENST00000563720 CDK5RAP2Q96SN8 1893 aa21.43■■□□□ 1.02
MAP1LC3B-204ENST00000563720 SPDYE5A6NIY4 337 aa21.43■■□□□ 1.02
MAP1LC3B-204ENST00000563720 MCAMP43121 646 aa21.43■■□□□ 1.02
MAP1LC3B-204ENST00000563720 ZNF384Q8TF68 577 aa21.43■■□□□ 1.02
MAP1LC3B-204ENST00000563720 ARHGAP39Q9C0H5 1083 aa21.43■■□□□ 1.02
MAP1LC3B-204ENST00000563720 LACTBP83111 547 aaPredicted RBP21.42■■□□□ 1.02
MAP1LC3B-204ENST00000563720 MECOMQ03112 1051 aa21.42■■□□□ 1.02
MAP1LC3B-204ENST00000563720 DCAF15Q66K64 600 aa21.42■■□□□ 1.02
MAP1LC3B-204ENST00000563720 TBC1D9Q6ZT07 1266 aa21.42■■□□□ 1.02
MAP1LC3B-204ENST00000563720 ERICH6Q7L0X2 663 aa21.42■■□□□ 1.02
MAP1LC3B-204ENST00000563720 WRNIP1Q96S55 665 aa21.42■■□□□ 1.02
MAP1LC3B-204ENST00000563720 SNCAIPQ9Y6H5 919 aa21.42■■□□□ 1.02
MAP1LC3B-204ENST00000563720 MROH7-TTC4A0A0A0MT08 1334 aa21.41■■□□□ 1.02
MAP1LC3B-204ENST00000563720 BTBD19C9JJ37 291 aa21.41■■□□□ 1.02
MAP1LC3B-204ENST00000563720 GNRH1P01148 92 aa21.41■■□□□ 1.02
MAP1LC3B-204ENST00000563720 UQCRFS1P1P0C7P4 283 aa21.41■■□□□ 1.02
MAP1LC3B-204ENST00000563720 MS4A1P11836 297 aa21.41■■□□□ 1.02
MAP1LC3B-204ENST00000563720 SNAPC2Q13487 334 aa21.41■■□□□ 1.02
MAP1LC3B-204ENST00000563720 MIGA2Q7L4E1 593 aa21.41■■□□□ 1.02
MAP1LC3B-204ENST00000563720 ERO1BQ86YB8 467 aa21.41■■□□□ 1.02
MAP1LC3B-204ENST00000563720 ZFPM1Q8IX07 1006 aa21.41■■□□□ 1.02
MAP1LC3B-204ENST00000563720 SLF2Q8IX21 1173 aa21.41■■□□□ 1.02
MAP1LC3B-204ENST00000563720 ZKSCAN4Q969J2 545 aaPredicted RBP21.41■■□□□ 1.02
MAP1LC3B-204ENST00000563720 DBNDD2Q9BQY9 259 aa21.41■■□□□ 1.02
MAP1LC3B-204ENST00000563720 IDI2Q9BXS1 227 aa21.41■■□□□ 1.02
MAP1LC3B-204ENST00000563720 ZCCHC17Q9NP64 241 aaKnown RBP21.41■■□□□ 1.02
MAP1LC3B-204ENST00000563720 ECM2O94769 699 aaPredicted RBP21.4■■□□□ 1.02
MAP1LC3B-204ENST00000563720 BTDP43251 543 aa21.4■■□□□ 1.02
MAP1LC3B-204ENST00000563720 RGS3P49796 1198 aa21.4■■□□□ 1.02
MAP1LC3B-204ENST00000563720 PRMT2P55345 433 aa21.4■■□□□ 1.02
MAP1LC3B-204ENST00000563720 ZNF341Q9BYN7 854 aa21.4■■□□□ 1.02
MAP1LC3B-204ENST00000563720 RCAN3Q9UKA8 241 aa21.4■■□□□ 1.02
MAP1LC3B-204ENST00000563720 FOCADQ5VW36 1801 aa21.4■■□□□ 1.02
MAP1LC3B-204ENST00000563720 GPR75-ASB3A0A0A6YYF3 556 aa21.39■■□□□ 1.01
MAP1LC3B-204ENST00000563720 IRF6O14896 467 aa21.39■■□□□ 1.01
MAP1LC3B-204ENST00000563720 CHRDL2Q6WN34 429 aa21.39■■□□□ 1.01
MAP1LC3B-204ENST00000563720 DPF3Q92784 378 aa21.39■■□□□ 1.01
MAP1LC3B-204ENST00000563720 NSUN4Q96CB9 384 aaKnown RBP21.39■■□□□ 1.01
MAP1LC3B-204ENST00000563720 ATRNL1Q5VV63 1379 aa21.38■■□□□ 1.01
MAP1LC3B-204ENST00000563720 ENTPD3O75355 529 aa21.38■■□□□ 1.01
MAP1LC3B-204ENST00000563720 TTC39AQ5SRH9 613 aa21.38■■□□□ 1.01
MAP1LC3B-204ENST00000563720 ZNF112Q9UJU3 913 aa21.38■■□□□ 1.01
MAP1LC3B-204ENST00000563720 COG6Q9Y2V7 657 aa21.38■■□□□ 1.01
MAP1LC3B-204ENST00000563720 DOCK1Q14185 1865 aa21.37■■□□□ 1.01
MAP1LC3B-204ENST00000563720 INPP5BP32019 993 aa21.37■■□□□ 1.01
MAP1LC3B-204ENST00000563720 RHBDL3P58872 404 aa21.37■■□□□ 1.01
MAP1LC3B-204ENST00000563720 PPIL2Q13356 520 aa21.37■■□□□ 1.01
MAP1LC3B-204ENST00000563720 CCDC158Q5M9N0 1113 aa21.37■■□□□ 1.01
MAP1LC3B-204ENST00000563720 SH3BP5LQ7L8J4 393 aa21.37■■□□□ 1.01
MAP1LC3B-204ENST00000563720 EAF2Q96CJ1 260 aaPredicted RBP21.37■■□□□ 1.01
MAP1LC3B-204ENST00000563720 DDX4Q9NQI0 724 aaKnown RBP21.37■■□□□ 1.01
MAP1LC3B-204ENST00000563720 SNRKQ9NRH2 765 aa21.37■■□□□ 1.01
MAP1LC3B-204ENST00000563720 RAI14Q9P0K7 980 aa21.37■■□□□ 1.01
MAP1LC3B-204ENST00000563720 DBNLQ9UJU6 430 aaKnown RBP21.37■■□□□ 1.01
MAP1LC3B-204ENST00000563720 PHIPQ8WWQ0 1821 aa21.36■■□□□ 1.01
MAP1LC3B-204ENST00000563720 PTPRFP10586 1907 aa21.36■■□□□ 1.01
MAP1LC3B-204ENST00000563720 GSTO1P78417 241 aa21.36■■□□□ 1.01
MAP1LC3B-204ENST00000563720 MTFR1Q15390 333 aa21.36■■□□□ 1.01
MAP1LC3B-204ENST00000563720 ZNF512BQ96KM6 892 aaPredicted RBP21.36■■□□□ 1.01
MAP1LC3B-204ENST00000563720 TLR7Q9NYK1 1049 aaKnown RBP21.36■■□□□ 1.01
MAP1LC3B-204ENST00000563720 DDX19BQ9UMR2 479 aa21.36■■□□□ 1.01
MAP1LC3B-204ENST00000563720 EXOC6BQ9Y2D4 811 aa21.36■■□□□ 1.01
MAP1LC3B-204ENST00000563720 ZSWIM8A7E2V4 1837 aa21.36■■□□□ 1.01
MAP1LC3B-204ENST00000563720 ATAD5Q96QE3 1844 aa21.35■■□□□ 1.01
MAP1LC3B-204ENST00000563720 LDHCP07864 332 aa21.35■■□□□ 1.01
MAP1LC3B-204ENST00000563720 HOXD10P28358 340 aa21.35■■□□□ 1.01
MAP1LC3B-204ENST00000563720 PSMC4P43686 418 aa21.35■■□□□ 1.01
MAP1LC3B-204ENST00000563720 NKX2-3Q8TAU0 364 aa21.35■■□□□ 1.01
MAP1LC3B-204ENST00000563720 CCDC8Q9H0W5 538 aaPredicted RBP21.35■■□□□ 1.01
MAP1LC3B-204ENST00000563720 ZBTB40Q9NUA8 1239 aa21.35■■□□□ 1.01
MAP1LC3B-204ENST00000563720 LRP2BPQ9P2M1 347 aa21.35■■□□□ 1.01
MAP1LC3B-204ENST00000563720 CPA4Q9UI42 421 aa21.35■■□□□ 1.01
MAP1LC3B-204ENST00000563720 CYP2E1P05181 493 aaPredicted RBP21.34■■□□□ 1.01
MAP1LC3B-204ENST00000563720 PPATQ06203 517 aa21.34■■□□□ 1.01
MAP1LC3B-204ENST00000563720 PICALMQ13492 652 aa21.34■■□□□ 1.01
MAP1LC3B-204ENST00000563720 C17orf99Q6UX52 265 aa21.34■■□□□ 1.01
MAP1LC3B-204ENST00000563720 RAET1EQ8TD07 263 aa21.34■■□□□ 1.01
MAP1LC3B-204ENST00000563720 SHISA4Q96DD7 197 aa21.34■■□□□ 1.01
MAP1LC3B-204ENST00000563720 SRRDQ9UH36 339 aa21.34■■□□□ 1.01
MAP1LC3B-204ENST00000563720 SIPA1L1O43166 1804 aa21.34■■□□□ 1.01
MAP1LC3B-204ENST00000563720 DDTLA6NHG4 134 aaPredicted RBP21.33■■□□□ 1.01
MAP1LC3B-204ENST00000563720 NPM3O75607 178 aaKnown RBP21.33■■□□□ 1.01
MAP1LC3B-204ENST00000563720 FMNL1O95466 1100 aaPredicted RBP21.33■■□□□ 1.01
MAP1LC3B-204ENST00000563720 GRK4P32298 578 aa21.33■■□□□ 1.01
MAP1LC3B-204ENST00000563720 NOL9Q5SY16 702 aaKnown RBP21.33■■□□□ 1.01
MAP1LC3B-204ENST00000563720 ERC1Q8IUD2 1116 aa21.33■■□□□ 1.01
MAP1LC3B-204ENST00000563720 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.33■■□□□ 1.01
MAP1LC3B-204ENST00000563720 RBM27Q9P2N5 1060 aaKnown RBP21.33■■□□□ 1.01
MAP1LC3B-204ENST00000563720 PHF20L1A8MW92 1017 aa21.32■■□□□ 1
MAP1LC3B-204ENST00000563720 MAP4K4O95819 1239 aaPredicted RBP21.32■■□□□ 1
MAP1LC3B-204ENST00000563720 OSBPP22059 807 aa21.32■■□□□ 1
MAP1LC3B-204ENST00000563720 CTGFP29279 349 aa21.32■■□□□ 1
MAP1LC3B-204ENST00000563720 MAP3K10Q02779 954 aa21.32■■□□□ 1
MAP1LC3B-204ENST00000563720 ANKRD23Q86SG2 305 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms