RNA–Protein interactions for RNA: ENST00000563686.5

TCF4-218, Transcript of transcription factor 4, humanhuman

TSL 2

Gene TCF4, Length 6,012 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-218ENST00000563686 USP28Q96RU2 1077 aa6.51□□□□□ -1.37
TCF4-218ENST00000563686 TUBB2BQ9BVA1 445 aa6.51□□□□□ -1.37
TCF4-218ENST00000563686 CMA1P23946 247 aa6.5□□□□□ -1.37
TCF4-218ENST00000563686 MCM7P33993 719 aa6.5□□□□□ -1.37
TCF4-218ENST00000563686 MTIF2P46199 727 aaKnown RBP6.5□□□□□ -1.37
TCF4-218ENST00000563686 PIP4K2BP78356 416 aa6.5□□□□□ -1.37
TCF4-218ENST00000563686 PARP10Q53GL7 1025 aa6.5□□□□□ -1.37
TCF4-218ENST00000563686 PPP1R13BQ96KQ4 1090 aa6.5□□□□□ -1.37
TCF4-218ENST00000563686 RAB34Q9BZG1 259 aa6.5□□□□□ -1.37
TCF4-218ENST00000563686 RBM6P78332 1123 aaKnown RBP6.5□□□□□ -1.37
TCF4-218ENST00000563686 SPAG1Q07617 926 aa6.5□□□□□ -1.37
TCF4-218ENST00000563686 WWC2Q6AWC2 1192 aa6.5□□□□□ -1.37
TCF4-218ENST00000563686 HEATR3Q7Z4Q2 680 aa6.5□□□□□ -1.37
TCF4-218ENST00000563686 ZNF804AQ7Z570 1209 aa6.5□□□□□ -1.37
TCF4-218ENST00000563686 CCDC43Q96MW1 224 aaKnown RBP6.5□□□□□ -1.37
TCF4-218ENST00000563686 TCP11L1Q9NUJ3 509 aa6.5□□□□□ -1.37
TCF4-218ENST00000563686 KIAA1468Q9P260 1216 aa6.5□□□□□ -1.37
TCF4-218ENST00000563686 ZHX1Q9UKY1 873 aaPredicted RBP6.5□□□□□ -1.37
TCF4-218ENST00000563686 SLIT3O75094 1523 aa6.5□□□□□ -1.37
TCF4-218ENST00000563686 MAP3K15Q6ZN16 1313 aa6.5□□□□□ -1.37
TCF4-218ENST00000563686 U2AF2P26368 475 aaKnown RBP eCLIP6.5□□□□□ -1.37
TCF4-218ENST00000563686 ATP2B2Q01814 1243 aa6.5□□□□□ -1.37
TCF4-218ENST00000563686 UBXN1Q04323 297 aa6.5□□□□□ -1.37
TCF4-218ENST00000563686 SMARCC1Q92922 1105 aaPredicted RBP6.5□□□□□ -1.37
TCF4-218ENST00000563686 TRIM47Q96LD4 638 aa6.5□□□□□ -1.37
TCF4-218ENST00000563686 TIGD1Q96MW7 591 aa6.5□□□□□ -1.37
TCF4-218ENST00000563686 BPIFA3Q9BQP9 254 aa6.5□□□□□ -1.37
TCF4-218ENST00000563686 GOLPH3LQ9H4A5 285 aa6.5□□□□□ -1.37
TCF4-218ENST00000563686 POLR3EQ9NVU0 708 aa6.5□□□□□ -1.37
TCF4-218ENST00000563686 ERBB3P21860 1342 aa6.5□□□□□ -1.37
TCF4-218ENST00000563686 LTN1O94822 1766 aa6.5□□□□□ -1.37
TCF4-218ENST00000563686 BICDL2A1A5D9 508 aa6.5□□□□□ -1.37
TCF4-218ENST00000563686 N4BP3O15049 544 aa6.5□□□□□ -1.37
TCF4-218ENST00000563686 ERLIN2O94905 339 aa6.5□□□□□ -1.37
TCF4-218ENST00000563686 CYP21A2P08686 494 aa6.5□□□□□ -1.37
TCF4-218ENST00000563686 ADORA1P30542 326 aa6.5□□□□□ -1.37
TCF4-218ENST00000563686 PPARAQ07869 468 aa6.5□□□□□ -1.37
TCF4-218ENST00000563686 MYSM1Q5VVJ2 828 aa6.5□□□□□ -1.37
TCF4-218ENST00000563686 CYP26C1Q6V0L0 522 aa6.5□□□□□ -1.37
TCF4-218ENST00000563686 TAF4BQ92750 862 aa6.5□□□□□ -1.37
TCF4-218ENST00000563686 PHKBQ93100 1093 aa6.5□□□□□ -1.37
TCF4-218ENST00000563686 ACSBG1Q96GR2 724 aa6.5□□□□□ -1.37
TCF4-218ENST00000563686 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.5□□□□□ -1.37
TCF4-218ENST00000563686 V9GYY5 206 aaPredicted RBP6.5□□□□□ -1.37
TCF4-218ENST00000563686 CTAGE15A4D2H0 777 aa6.49□□□□□ -1.37
TCF4-218ENST00000563686 CTAGE8P0CG41 777 aa6.49□□□□□ -1.37
TCF4-218ENST00000563686 HSP90AA4PQ58FG1 418 aa6.49□□□□□ -1.37
TCF4-218ENST00000563686 CTAGE6Q86UF2 777 aa6.49□□□□□ -1.37
TCF4-218ENST00000563686 DHX40Q8IX18 779 aaKnown RBP6.49□□□□□ -1.37
TCF4-218ENST00000563686 CTAGE4Q8IX94 777 aa6.49□□□□□ -1.37
TCF4-218ENST00000563686 MLKLQ8NB16 471 aa6.49□□□□□ -1.37
TCF4-218ENST00000563686 XPO4Q9C0E2 1151 aaKnown RBP6.49□□□□□ -1.37
TCF4-218ENST00000563686 NALCNQ8IZF0 1738 aa6.49□□□□□ -1.37
TCF4-218ENST00000563686 PPP2R5BQ15173 497 aa6.49□□□□□ -1.37
TCF4-218ENST00000563686 ZNF174Q15697 407 aa6.49□□□□□ -1.37
TCF4-218ENST00000563686 SLC4A8Q2Y0W8 1093 aa6.49□□□□□ -1.37
TCF4-218ENST00000563686 TSGA10IPQ3SY00 556 aa6.49□□□□□ -1.37
TCF4-218ENST00000563686 AK9Q5TCS8 1911 aa6.49□□□□□ -1.37
TCF4-218ENST00000563686 H7C1W4 665 aa6.49□□□□□ -1.37
TCF4-218ENST00000563686 SH2B2O14492 632 aaPredicted RBP6.49□□□□□ -1.37
TCF4-218ENST00000563686 CALML3P27482 149 aa6.49□□□□□ -1.37
TCF4-218ENST00000563686 GNAQP50148 359 aa6.49□□□□□ -1.37
TCF4-218ENST00000563686 ST5P78524 1137 aa6.49□□□□□ -1.37
TCF4-218ENST00000563686 KARSQ15046 597 aaKnown RBP6.49□□□□□ -1.37
TCF4-218ENST00000563686 ELF2Q15723 593 aa6.49□□□□□ -1.37
TCF4-218ENST00000563686 CNGA4Q8IV77 575 aa6.49□□□□□ -1.37
TCF4-218ENST00000563686 HELBQ8NG08 1087 aaPredicted RBP6.49□□□□□ -1.37
TCF4-218ENST00000563686 WDR19Q8NEZ3 1342 aa6.49□□□□□ -1.37
TCF4-218ENST00000563686 SALL3Q9BXA9 1300 aa6.49□□□□□ -1.37
TCF4-218ENST00000563686 LDHCP07864 332 aa6.49□□□□□ -1.37
TCF4-218ENST00000563686 PLCD1P51178 756 aa6.49□□□□□ -1.37
TCF4-218ENST00000563686 FOXO4P98177 505 aa6.49□□□□□ -1.37
TCF4-218ENST00000563686 IFNL3Q8IZI9 196 aa6.49□□□□□ -1.37
TCF4-218ENST00000563686 RRP36Q96EU6 259 aaKnown RBP6.49□□□□□ -1.37
TCF4-218ENST00000563686 SETD1AO15047 1707 aaKnown RBP6.49□□□□□ -1.37
TCF4-218ENST00000563686 POLR2DO15514 142 aaKnown RBP6.49□□□□□ -1.37
TCF4-218ENST00000563686 IGKV5-2P06315 115 aa6.49□□□□□ -1.37
TCF4-218ENST00000563686 ADD2P35612 726 aa6.49□□□□□ -1.37
TCF4-218ENST00000563686 CYLC1P35663 651 aaPredicted RBP6.49□□□□□ -1.37
TCF4-218ENST00000563686 KRT83P78385 493 aa6.49□□□□□ -1.37
TCF4-218ENST00000563686 SARM1Q6SZW1 724 aa6.49□□□□□ -1.37
TCF4-218ENST00000563686 CACNA2D4Q7Z3S7 1137 aa6.49□□□□□ -1.37
TCF4-218ENST00000563686 CDCA7Q9BWT1 371 aaPredicted RBP6.49□□□□□ -1.37
TCF4-218ENST00000563686 PUS3Q9BZE2 481 aaKnown RBP6.49□□□□□ -1.37
TCF4-218ENST00000563686 ZHX3Q9H4I2 956 aa6.49□□□□□ -1.37
TCF4-218ENST00000563686 SPTLC3Q9NUV7 552 aa6.49□□□□□ -1.37
TCF4-218ENST00000563686 CCDC87Q9NVE4 849 aa6.49□□□□□ -1.37
TCF4-218ENST00000563686 NRBP1Q9UHY1 535 aa6.49□□□□□ -1.37
TCF4-218ENST00000563686 GABPB1Q06547 395 aaPredicted RBP6.48□□□□□ -1.37
TCF4-218ENST00000563686 SPECC1Q5M775 1068 aa6.48□□□□□ -1.37
TCF4-218ENST00000563686 ZNF569Q5MCW4 686 aa6.48□□□□□ -1.37
TCF4-218ENST00000563686 ZSCAN10Q96SZ4 725 aaPredicted RBP6.48□□□□□ -1.37
TCF4-218ENST00000563686 MYL10Q9BUA6 226 aa6.48□□□□□ -1.37
TCF4-218ENST00000563686 SERTAD1Q9UHV2 236 aa6.48□□□□□ -1.37
TCF4-218ENST00000563686 TTF2Q9UNY4 1162 aaKnown RBP6.48□□□□□ -1.37
TCF4-218ENST00000563686 LRRC37A3O60309 1634 aa6.48□□□□□ -1.37
TCF4-218ENST00000563686 UBE3CQ15386 1083 aa6.48□□□□□ -1.37
TCF4-218ENST00000563686 KRBA2Q6ZNG9 492 aa6.48□□□□□ -1.37
TCF4-218ENST00000563686 CRACR2AQ9BSW2 395 aa6.48□□□□□ -1.37
TCF4-218ENST00000563686 BTG4Q9NY30 223 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms