RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 SLC45A1Q9Y2W3 748 aa23.21■■□□□ 1.31
NME3-204ENST00000563498 ZHX2Q9Y6X8 837 aa23.21■■□□□ 1.31
NME3-204ENST00000563498 GJB1P08034 283 aa23.2■■□□□ 1.3
NME3-204ENST00000563498 CYP2C8P10632 490 aa23.2■■□□□ 1.3
NME3-204ENST00000563498 GJA8P48165 433 aa23.2■■□□□ 1.3
NME3-204ENST00000563498 SLF2Q8IX21 1173 aa23.2■■□□□ 1.3
NME3-204ENST00000563498 TRMT2AQ8IZ69 625 aaKnown RBP23.2■■□□□ 1.3
NME3-204ENST00000563498 FAM163AQ96GL9 167 aaPredicted RBP23.2■■□□□ 1.3
NME3-204ENST00000563498 LRRFIP2Q9Y608 721 aaKnown RBP23.2■■□□□ 1.3
NME3-204ENST00000563498 MYH2Q9UKX2 1941 aa23.2■■□□□ 1.3
NME3-204ENST00000563498 CCL5P13501 91 aa23.19■■□□□ 1.3
NME3-204ENST00000563498 PTPRAP18433 802 aa23.19■■□□□ 1.3
NME3-204ENST00000563498 UBXN2AP68543 259 aa23.19■■□□□ 1.3
NME3-204ENST00000563498 PRKCZQ05513 592 aa23.19■■□□□ 1.3
NME3-204ENST00000563498 DZIP1Q86YF9 867 aaKnown RBP23.19■■□□□ 1.3
NME3-204ENST00000563498 API5Q9BZZ5 524 aaKnown RBP23.19■■□□□ 1.3
NME3-204ENST00000563498 AFG3L2Q9Y4W6 797 aa23.19■■□□□ 1.3
NME3-204ENST00000563498 CEP290O15078 2479 aa23.18■■□□□ 1.3
NME3-204ENST00000563498 ADORA1P30542 326 aa23.18■■□□□ 1.3
NME3-204ENST00000563498 RASGRF1Q13972 1273 aa23.18■■□□□ 1.3
NME3-204ENST00000563498 SH3BP5LQ7L8J4 393 aa23.18■■□□□ 1.3
NME3-204ENST00000563498 UBE2Q1Q7Z7E8 422 aa23.18■■□□□ 1.3
NME3-204ENST00000563498 SLAIN1Q8ND83 568 aa23.18■■□□□ 1.3
NME3-204ENST00000563498 CDCA7LQ96GN5 454 aa23.18■■□□□ 1.3
NME3-204ENST00000563498 NOB1Q9ULX3 412 aaKnown RBP23.18■■□□□ 1.3
NME3-204ENST00000563498 PA2G4Q9UQ80 394 aaKnown RBP23.18■■□□□ 1.3
NME3-204ENST00000563498 MGAMO43451 1857 aa23.17■■□□□ 1.3
NME3-204ENST00000563498 CTNND1O60716 968 aaKnown RBP23.17■■□□□ 1.3
NME3-204ENST00000563498 SPTY2D1Q68D10 685 aaPredicted RBP23.17■■□□□ 1.3
NME3-204ENST00000563498 ZSCAN29Q8IWY8 852 aaPredicted RBP23.17■■□□□ 1.3
NME3-204ENST00000563498 RNF208Q9H0X6 261 aa23.17■■□□□ 1.3
NME3-204ENST00000563498 BIN2Q9UBW5 565 aaPredicted RBP23.16■■□□□ 1.3
NME3-204ENST00000563498 ABCF2Q9UG63 623 aa23.16■■□□□ 1.3
NME3-204ENST00000563498 DOCK1Q14185 1865 aa23.15■■□□□ 1.3
NME3-204ENST00000563498 DDTLA6NHG4 134 aaPredicted RBP23.15■■□□□ 1.3
NME3-204ENST00000563498 NPM3O75607 178 aaKnown RBP23.15■■□□□ 1.3
NME3-204ENST00000563498 DPF3Q92784 378 aa23.15■■□□□ 1.3
NME3-204ENST00000563498 HTATIP2Q9BUP3 242 aa23.15■■□□□ 1.3
NME3-204ENST00000563498 AKAP2Q9Y2D5 859 aa23.15■■□□□ 1.3
NME3-204ENST00000563498 MROH7-TTC4A0A0A0MT08 1334 aa23.14■■□□□ 1.3
NME3-204ENST00000563498 CAPN2P17655 700 aa23.14■■□□□ 1.29
NME3-204ENST00000563498 BTDP43251 543 aa23.14■■□□□ 1.29
NME3-204ENST00000563498 TIMM10P62072 90 aa23.14■■□□□ 1.29
NME3-204ENST00000563498 GADL1Q6ZQY3 521 aa23.14■■□□□ 1.29
NME3-204ENST00000563498 MEIS3Q99687 375 aa23.14■■□□□ 1.29
NME3-204ENST00000563498 DDX4Q9NQI0 724 aaKnown RBP23.14■■□□□ 1.29
NME3-204ENST00000563498 GABRQQ9UN88 632 aa23.14■■□□□ 1.29
NME3-204ENST00000563498 PTPRFP10586 1907 aa23.14■■□□□ 1.29
NME3-204ENST00000563498 PHIPQ8WWQ0 1821 aa23.13■■□□□ 1.29
NME3-204ENST00000563498 GPR75-ASB3A0A0A6YYF3 556 aa23.13■■□□□ 1.29
NME3-204ENST00000563498 A0A1B0GUL7 405 aa23.13■■□□□ 1.29
NME3-204ENST00000563498 TBC1D12O60347 775 aa23.13■■□□□ 1.29
NME3-204ENST00000563498 MVPQ14764 893 aaKnown RBP23.13■■□□□ 1.29
NME3-204ENST00000563498 PXYLP1Q8TE99 480 aa23.13■■□□□ 1.29
NME3-204ENST00000563498 U2AF1L4Q8WU68 220 aaKnown RBP23.13■■□□□ 1.29
NME3-204ENST00000563498 XAGE2Q96GT9 111 aa23.13■■□□□ 1.29
NME3-204ENST00000563498 MAP4K4O95819 1239 aaPredicted RBP23.12■■□□□ 1.29
NME3-204ENST00000563498 PICALMQ13492 652 aa23.12■■□□□ 1.29
NME3-204ENST00000563498 MTX1Q13505 466 aa23.12■■□□□ 1.29
NME3-204ENST00000563498 IRF5Q13568 498 aa23.12■■□□□ 1.29
NME3-204ENST00000563498 CHRDL2Q6WN34 429 aa23.12■■□□□ 1.29
NME3-204ENST00000563498 SMCR8Q8TEV9 937 aaPredicted RBP23.12■■□□□ 1.29
NME3-204ENST00000563498 AGTPBP1Q9UPW5 1226 aa23.12■■□□□ 1.29
NME3-204ENST00000563498 TRIOBPQ9H2D6 2365 aa23.11■■□□□ 1.29
NME3-204ENST00000563498 TRIM75PA6NK02 468 aa23.11■■□□□ 1.29
NME3-204ENST00000563498 ADCY3O60266 1144 aa23.11■■□□□ 1.29
NME3-204ENST00000563498 SGPL1O95470 568 aa23.11■■□□□ 1.29
NME3-204ENST00000563498 GNAI3P08754 354 aa23.11■■□□□ 1.29
NME3-204ENST00000563498 FLT3LGP49771 235 aa23.11■■□□□ 1.29
NME3-204ENST00000563498 RHBDL3P58872 404 aa23.11■■□□□ 1.29
NME3-204ENST00000563498 MECOMQ03112 1051 aa23.11■■□□□ 1.29
NME3-204ENST00000563498 ERICH6Q7L0X2 663 aa23.11■■□□□ 1.29
NME3-204ENST00000563498 ARHGAP45Q92619 1136 aa23.11■■□□□ 1.29
NME3-204ENST00000563498 UNC93B1Q9H1C4 597 aa23.11■■□□□ 1.29
NME3-204ENST00000563498 COL2A1P02458 1487 aaPredicted RBP23.11■■□□□ 1.29
NME3-204ENST00000563498 TNPO2O14787 897 aaKnown RBP23.1■■□□□ 1.29
NME3-204ENST00000563498 SRGAP3O43295 1099 aa23.1■■□□□ 1.29
NME3-204ENST00000563498 TFCP2Q12800 502 aa23.1■■□□□ 1.29
NME3-204ENST00000563498 FARP2O94887 1054 aaPredicted RBP23.09■■□□□ 1.29
NME3-204ENST00000563498 SLURP2P0DP57 97 aa23.09■■□□□ 1.29
NME3-204ENST00000563498 GSTO1P78417 241 aa23.09■■□□□ 1.29
NME3-204ENST00000563498 PROCA1Q8NCQ7 364 aaPredicted RBP23.09■■□□□ 1.29
NME3-204ENST00000563498 ZNF384Q8TF68 577 aa23.09■■□□□ 1.29
NME3-204ENST00000563498 OSBPL5Q9H0X9 879 aaPredicted RBP23.09■■□□□ 1.29
NME3-204ENST00000563498 PNMA3Q9UL41 463 aa23.09■■□□□ 1.29
NME3-204ENST00000563498 NR2E3Q9Y5X4 410 aa23.09■■□□□ 1.29
NME3-204ENST00000563498 INHAP05111 366 aa23.08■■□□□ 1.29
NME3-204ENST00000563498 LDHCP07864 332 aa23.08■■□□□ 1.29
NME3-204ENST00000563498 TBC1D2Q9BYX2 928 aa23.08■■□□□ 1.29
NME3-204ENST00000563498 RBM27Q9P2N5 1060 aaKnown RBP23.08■■□□□ 1.29
NME3-204ENST00000563498 ELNP15502 786 aa23.07■■□□□ 1.28
NME3-204ENST00000563498 RARSP54136 660 aaKnown RBP23.07■■□□□ 1.28
NME3-204ENST00000563498 FAM110CQ1W6H9 321 aa23.07■■□□□ 1.28
NME3-204ENST00000563498 COA7Q96BR5 231 aa23.07■■□□□ 1.28
NME3-204ENST00000563498 NSUN4Q96CB9 384 aaKnown RBP23.07■■□□□ 1.28
NME3-204ENST00000563498 PRO3102Q9H379 93 aa23.07■■□□□ 1.28
NME3-204ENST00000563498 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.07■■□□□ 1.28
NME3-204ENST00000563498 HMG20BQ9P0W2 317 aa23.07■■□□□ 1.28
NME3-204ENST00000563498 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.07■■□□□ 1.28
NME3-204ENST00000563498 TREML2Q5T2D2 321 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms