RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 TMPRSS2O15393 492 aa5.53□□□□□ -1.52
SHCBP1-202ENST00000563219 ZNF862O60290 1169 aa5.53□□□□□ -1.52
SHCBP1-202ENST00000563219 GSTP1P09211 210 aaKnown RBP5.53□□□□□ -1.52
SHCBP1-202ENST00000563219 XRCC5P13010 732 aaKnown RBP5.53□□□□□ -1.52
SHCBP1-202ENST00000563219 FCGRTP55899 365 aa5.53□□□□□ -1.52
SHCBP1-202ENST00000563219 VSIG10LQ86VR7 867 aa5.53□□□□□ -1.52
SHCBP1-202ENST00000563219 OSBPL7Q9BZF2 842 aa5.53□□□□□ -1.52
SHCBP1-202ENST00000563219 ZC3H12CQ9C0D7 883 aaKnown RBP5.53□□□□□ -1.52
SHCBP1-202ENST00000563219 LRRC4CQ9HCJ2 640 aa5.53□□□□□ -1.52
SHCBP1-202ENST00000563219 RNF19AQ9NV58 838 aa5.53□□□□□ -1.52
SHCBP1-202ENST00000563219 TMEM39AQ9NV64 488 aa5.53□□□□□ -1.52
SHCBP1-202ENST00000563219 ZC3H7BQ9UGR2 993 aaKnown RBP5.53□□□□□ -1.52
SHCBP1-202ENST00000563219 DAGLAQ9Y4D2 1042 aa5.53□□□□□ -1.52
SHCBP1-202ENST00000563219 VAMP1P23763 118 aa5.52□□□□□ -1.53
SHCBP1-202ENST00000563219 ITGAEP38570 1179 aa5.52□□□□□ -1.53
SHCBP1-202ENST00000563219 XPCQ01831 940 aaPredicted RBP5.52□□□□□ -1.53
SHCBP1-202ENST00000563219 ID3Q02535 119 aa5.52□□□□□ -1.53
SHCBP1-202ENST00000563219 PPP2R3AQ06190 1150 aa5.52□□□□□ -1.53
SHCBP1-202ENST00000563219 KIF4BQ2VIQ3 1234 aa5.52□□□□□ -1.53
SHCBP1-202ENST00000563219 FANCD2OSQ96PS1 177 aa5.52□□□□□ -1.53
SHCBP1-202ENST00000563219 BCO2Q9BYV7 579 aa5.52□□□□□ -1.53
SHCBP1-202ENST00000563219 ATXN3LQ9H3M9 355 aa5.52□□□□□ -1.53
SHCBP1-202ENST00000563219 C12orf49Q9H741 205 aa5.52□□□□□ -1.53
SHCBP1-202ENST00000563219 LGR6Q9HBX8 967 aa5.52□□□□□ -1.53
SHCBP1-202ENST00000563219 DISC1Q9NRI5 854 aa5.52□□□□□ -1.53
SHCBP1-202ENST00000563219 KRT82Q9NSB4 513 aa5.52□□□□□ -1.53
SHCBP1-202ENST00000563219 RNF114Q9Y508 228 aa5.52□□□□□ -1.53
SHCBP1-202ENST00000563219 AK5Q9Y6K8 562 aa5.52□□□□□ -1.53
SHCBP1-202ENST00000563219 PSMD2Q13200 908 aa5.51□□□□□ -1.53
SHCBP1-202ENST00000563219 MRPL58Q14197 206 aaKnown RBP5.51□□□□□ -1.53
SHCBP1-202ENST00000563219 NXPE4Q6UWF7 544 aa5.51□□□□□ -1.53
SHCBP1-202ENST00000563219 CBLL1Q75N03 491 aa5.51□□□□□ -1.53
SHCBP1-202ENST00000563219 PDZD3Q86UT5 571 aa5.51□□□□□ -1.53
SHCBP1-202ENST00000563219 TP53INP2Q8IXH6 220 aa5.51□□□□□ -1.53
SHCBP1-202ENST00000563219 BCL11AQ9H165 835 aa5.51□□□□□ -1.53
SHCBP1-202ENST00000563219 PCDHGC5Q9Y5F6 944 aa5.51□□□□□ -1.53
SHCBP1-202ENST00000563219 UNCXA6NJT0 531 aa5.5□□□□□ -1.53
SHCBP1-202ENST00000563219 SORBS3O60504 671 aa5.5□□□□□ -1.53
SHCBP1-202ENST00000563219 EIF4BP23588 611 aaKnown RBP5.5□□□□□ -1.53
SHCBP1-202ENST00000563219 HNRNPUQ00839 825 aaKnown RBP eCLIP5.5□□□□□ -1.53
SHCBP1-202ENST00000563219 CYP27C1Q4G0S4 372 aa5.5□□□□□ -1.53
SHCBP1-202ENST00000563219 ANKRD24Q8TF21 1146 aa5.5□□□□□ -1.53
SHCBP1-202ENST00000563219 PIDD1Q9HB75 910 aa5.5□□□□□ -1.53
SHCBP1-202ENST00000563219 PAK6Q9NQU5 681 aaPredicted RBP5.5□□□□□ -1.53
SHCBP1-202ENST00000563219 FAM8A1Q9UBU6 413 aa5.5□□□□□ -1.53
SHCBP1-202ENST00000563219 GPN3Q9UHW5 284 aaPredicted RBP5.5□□□□□ -1.53
SHCBP1-202ENST00000563219 ARNTP27540 789 aa5.49□□□□□ -1.53
SHCBP1-202ENST00000563219 GSTT1P30711 240 aa5.49□□□□□ -1.53
SHCBP1-202ENST00000563219 SMYD4Q8IYR2 804 aaPredicted RBP5.49□□□□□ -1.53
SHCBP1-202ENST00000563219 AGBL5Q8NDL9 886 aa5.49□□□□□ -1.53
SHCBP1-202ENST00000563219 C3orf58Q8NDZ4 430 aa5.49□□□□□ -1.53
SHCBP1-202ENST00000563219 STK35Q8TDR2 534 aa5.49□□□□□ -1.53
SHCBP1-202ENST00000563219 KCNB2Q92953 911 aa5.49□□□□□ -1.53
SHCBP1-202ENST00000563219 ZNF428Q96B54 188 aa5.49□□□□□ -1.53
SHCBP1-202ENST00000563219 FAM161BQ96MY7 647 aa5.49□□□□□ -1.53
SHCBP1-202ENST00000563219 MRS2Q9HD23 443 aa5.49□□□□□ -1.53
SHCBP1-202ENST00000563219 AKAP2Q9Y2D5 859 aa5.49□□□□□ -1.53
SHCBP1-202ENST00000563219 USP17L7P0C7H9 530 aa5.48□□□□□ -1.53
SHCBP1-202ENST00000563219 FAM87AP0C7U9 286 aa5.48□□□□□ -1.53
SHCBP1-202ENST00000563219 CDK5R2Q13319 367 aa5.48□□□□□ -1.53
SHCBP1-202ENST00000563219 TTLL4Q14679 1199 aa5.48□□□□□ -1.53
SHCBP1-202ENST00000563219 ZC3H12AQ5D1E8 599 aaKnown RBP5.48□□□□□ -1.53
SHCBP1-202ENST00000563219 SULF2Q8IWU5 870 aa5.48□□□□□ -1.53
SHCBP1-202ENST00000563219 FLCNQ8NFG4 579 aa5.48□□□□□ -1.53
SHCBP1-202ENST00000563219 BCL7CQ8WUZ0 217 aaPredicted RBP5.48□□□□□ -1.53
SHCBP1-202ENST00000563219 MRRFQ96E11 262 aaKnown RBP5.48□□□□□ -1.53
SHCBP1-202ENST00000563219 EMILIN2Q9BXX0 1053 aa5.48□□□□□ -1.53
SHCBP1-202ENST00000563219 KIAA1522Q9P206 1035 aaPredicted RBP5.48□□□□□ -1.53
SHCBP1-202ENST00000563219 PCOLCE2Q9UKZ9 415 aa5.48□□□□□ -1.53
SHCBP1-202ENST00000563219 SLC5A6Q9Y289 635 aa5.48□□□□□ -1.53
SHCBP1-202ENST00000563219 RNGTTO60942 597 aaKnown RBP5.47□□□□□ -1.53
SHCBP1-202ENST00000563219 CTSHP09668 335 aa5.47□□□□□ -1.53
SHCBP1-202ENST00000563219 NME2P22392 152 aa5.47□□□□□ -1.53
SHCBP1-202ENST00000563219 ZNF252P-AS1Q0IIN9 211 aa5.47□□□□□ -1.53
SHCBP1-202ENST00000563219 STK11IPQ8N1F8 1099 aa5.47□□□□□ -1.53
SHCBP1-202ENST00000563219 CRELD1Q96HD1 420 aa5.47□□□□□ -1.53
SHCBP1-202ENST00000563219 NECAB3Q96P71 396 aaPredicted RBP5.47□□□□□ -1.53
SHCBP1-202ENST00000563219 CACNA2D2Q9NY47 1150 aa5.47□□□□□ -1.53
SHCBP1-202ENST00000563219 PPM1HQ9ULR3 514 aa5.47□□□□□ -1.53
SHCBP1-202ENST00000563219 HCLS1P14317 486 aaPredicted RBP5.46□□□□□ -1.54
SHCBP1-202ENST00000563219 RBM25P49756 843 aaKnown RBP5.46□□□□□ -1.54
SHCBP1-202ENST00000563219 ST13P50502 369 aaKnown RBP5.46□□□□□ -1.54
SHCBP1-202ENST00000563219 ERVK-24P63145 666 aa5.46□□□□□ -1.54
SHCBP1-202ENST00000563219 LDLRAD1Q5T700 205 aa5.46□□□□□ -1.54
SHCBP1-202ENST00000563219 MAP1SQ66K74 1059 aaPredicted RBP5.46□□□□□ -1.54
SHCBP1-202ENST00000563219 SPRED2Q7Z698 418 aa5.46□□□□□ -1.54
SHCBP1-202ENST00000563219 RNF214Q8ND24 703 aa5.46□□□□□ -1.54
SHCBP1-202ENST00000563219 VTI1BQ9UEU0 232 aa5.46□□□□□ -1.54
SHCBP1-202ENST00000563219 RECKO95980 971 aa5.45□□□□□ -1.54
SHCBP1-202ENST00000563219 NEFMP07197 916 aa5.45□□□□□ -1.54
SHCBP1-202ENST00000563219 YBX3P16989 372 aaKnown RBP eCLIP5.45□□□□□ -1.54
SHCBP1-202ENST00000563219 JUNBP17275 347 aaPredicted RBP5.45□□□□□ -1.54
SHCBP1-202ENST00000563219 ITGB5P18084 799 aa5.45□□□□□ -1.54
SHCBP1-202ENST00000563219 BMP6P22004 513 aa5.45□□□□□ -1.54
SHCBP1-202ENST00000563219 WFDC3Q8IUB2 231 aa5.45□□□□□ -1.54
SHCBP1-202ENST00000563219 PLD6Q8N2A8 252 aaKnown RBP5.45□□□□□ -1.54
SHCBP1-202ENST00000563219 NETO1Q8TDF5 533 aa5.45□□□□□ -1.54
SHCBP1-202ENST00000563219 GPBAR1Q8TDU6 330 aa5.45□□□□□ -1.54
SHCBP1-202ENST00000563219 ISL2Q96A47 359 aa5.45□□□□□ -1.54
SHCBP1-202ENST00000563219 MISP3Q96FF7 219 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms