RNA–Protein interactions for RNA: ENST00000562998.1

CDH11-206, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-206ENST00000562998 PAG1Q9NWQ8 432 aa22.72■■□□□ 1.23
CDH11-206ENST00000562998 AATFQ9NY61 560 aaKnown RBP eCLIP22.72■■□□□ 1.23
CDH11-206ENST00000562998 ZNF112Q9UJU3 913 aa22.72■■□□□ 1.23
CDH11-206ENST00000562998 DDTLA6NHG4 134 aaPredicted RBP22.71■■□□□ 1.23
CDH11-206ENST00000562998 PLCG2P16885 1265 aa22.71■■□□□ 1.23
CDH11-206ENST00000562998 MAP3K9P80192 1104 aa22.71■■□□□ 1.23
CDH11-206ENST00000562998 SLC10A4Q96EP9 437 aa22.71■■□□□ 1.23
CDH11-206ENST00000562998 TCRBV5S4A2TA0A5A2 114 aa22.7■■□□□ 1.22
CDH11-206ENST00000562998 IGHDP01880 384 aa22.7■■□□□ 1.22
CDH11-206ENST00000562998 DCAF15Q66K64 600 aa22.7■■□□□ 1.22
CDH11-206ENST00000562998 REM2Q8IYK8 340 aaPredicted RBP22.7■■□□□ 1.22
CDH11-206ENST00000562998 OSBPL5Q9H0X9 879 aaPredicted RBP22.7■■□□□ 1.22
CDH11-206ENST00000562998 AK9Q5TCS8 1911 aa22.69■■□□□ 1.22
CDH11-206ENST00000562998 ZBTB48P10074 688 aaPredicted RBP22.69■■□□□ 1.22
CDH11-206ENST00000562998 PDE6AP16499 860 aa22.69■■□□□ 1.22
CDH11-206ENST00000562998 GJA5P36382 358 aa22.69■■□□□ 1.22
CDH11-206ENST00000562998 PICALMQ13492 652 aa22.69■■□□□ 1.22
CDH11-206ENST00000562998 VGLL4Q14135 290 aa22.69■■□□□ 1.22
CDH11-206ENST00000562998 MIGA2Q7L4E1 593 aa22.69■■□□□ 1.22
CDH11-206ENST00000562998 TEX11Q8IYF3 940 aa22.69■■□□□ 1.22
CDH11-206ENST00000562998 OTUD7AQ8TE49 926 aaPredicted RBP22.69■■□□□ 1.22
CDH11-206ENST00000562998 WNK4Q96J92 1243 aa22.69■■□□□ 1.22
CDH11-206ENST00000562998 NOL10Q9BSC4 688 aaKnown RBP22.69■■□□□ 1.22
CDH11-206ENST00000562998 TTC41PQ6P2S7 1318 aa22.68■■□□□ 1.22
CDH11-206ENST00000562998 TM4SF4P48230 202 aa22.68■■□□□ 1.22
CDH11-206ENST00000562998 DYNLL1P63167 89 aaKnown RBP22.68■■□□□ 1.22
CDH11-206ENST00000562998 SLC9C2Q5TAH2 1124 aa22.68■■□□□ 1.22
CDH11-206ENST00000562998 CERS3Q8IU89 383 aa22.68■■□□□ 1.22
CDH11-206ENST00000562998 PI4K2BQ8TCG2 481 aa22.68■■□□□ 1.22
CDH11-206ENST00000562998 RIOK1Q9BRS2 568 aaKnown RBP22.68■■□□□ 1.22
CDH11-206ENST00000562998 ZNF341Q9BYN7 854 aa22.68■■□□□ 1.22
CDH11-206ENST00000562998 RWDD1Q9H446 243 aaPredicted RBP22.68■■□□□ 1.22
CDH11-206ENST00000562998 SNCAIPQ9Y6H5 919 aa22.68■■□□□ 1.22
CDH11-206ENST00000562998 CA12O43570 354 aa22.67■■□□□ 1.22
CDH11-206ENST00000562998 ANKRD45Q5TZF3 282 aa22.67■■□□□ 1.22
CDH11-206ENST00000562998 MIGA1Q8NAN2 632 aa22.67■■□□□ 1.22
CDH11-206ENST00000562998 AIDAQ96BJ3 306 aa22.67■■□□□ 1.22
CDH11-206ENST00000562998 GPATCH3Q96I76 525 aa22.67■■□□□ 1.22
CDH11-206ENST00000562998 WRNIP1Q96S55 665 aa22.67■■□□□ 1.22
CDH11-206ENST00000562998 ZNF532Q9HCE3 1301 aa22.66■■□□□ 1.22
CDH11-206ENST00000562998 PHF20L1A8MW92 1017 aa22.66■■□□□ 1.22
CDH11-206ENST00000562998 TBC1D12O60347 775 aa22.66■■□□□ 1.22
CDH11-206ENST00000562998 ADD2P35612 726 aa22.66■■□□□ 1.22
CDH11-206ENST00000562998 TSHZ3Q63HK5 1081 aa22.66■■□□□ 1.22
CDH11-206ENST00000562998 ZKSCAN4Q969J2 545 aaPredicted RBP22.66■■□□□ 1.22
CDH11-206ENST00000562998 ELP3Q9H9T3 547 aa22.66■■□□□ 1.22
CDH11-206ENST00000562998 SIPA1L1O43166 1804 aa22.66■■□□□ 1.22
CDH11-206ENST00000562998 MYH7P12883 1935 aa22.65■■□□□ 1.22
CDH11-206ENST00000562998 FLT1P17948 1338 aa22.65■■□□□ 1.22
CDH11-206ENST00000562998 HSPA8P11142 646 aaKnown RBP22.65■■□□□ 1.22
CDH11-206ENST00000562998 INPP5BP32019 993 aa22.65■■□□□ 1.22
CDH11-206ENST00000562998 CTCFP49711 727 aaPredicted RBP22.65■■□□□ 1.22
CDH11-206ENST00000562998 NOL9Q5SY16 702 aaKnown RBP22.65■■□□□ 1.22
CDH11-206ENST00000562998 TGFBRAP1Q8WUH2 860 aa22.65■■□□□ 1.22
CDH11-206ENST00000562998 SPDYE5A6NIY4 337 aa22.64■■□□□ 1.21
CDH11-206ENST00000562998 SLURP2P0DP57 97 aa22.64■■□□□ 1.21
CDH11-206ENST00000562998 IRX6P78412 446 aaPredicted RBP22.64■■□□□ 1.21
CDH11-206ENST00000562998 MKRN3Q13064 507 aaKnown RBP22.64■■□□□ 1.21
CDH11-206ENST00000562998 METTL16Q86W50 562 aaKnown RBP22.64■■□□□ 1.21
CDH11-206ENST00000562998 ZSCAN29Q8IWY8 852 aaPredicted RBP22.64■■□□□ 1.21
CDH11-206ENST00000562998 CNKSR2Q8WXI2 1034 aa22.64■■□□□ 1.21
CDH11-206ENST00000562998 OPTNQ96CV9 577 aa22.64■■□□□ 1.21
CDH11-206ENST00000562998 BEGAINQ9BUH8 593 aa22.64■■□□□ 1.21
CDH11-206ENST00000562998 SAGE1Q9NXZ1 904 aa22.64■■□□□ 1.21
CDH11-206ENST00000562998 STAP2Q9UGK3 403 aa22.64■■□□□ 1.21
CDH11-206ENST00000562998 CSADQ9Y600 493 aa22.64■■□□□ 1.21
CDH11-206ENST00000562998 TESPA1A2RU30 521 aaPredicted RBP22.63■■□□□ 1.21
CDH11-206ENST00000562998 MX1P20591 662 aa22.63■■□□□ 1.21
CDH11-206ENST00000562998 UBE3CQ15386 1083 aa22.63■■□□□ 1.21
CDH11-206ENST00000562998 SLFNL1Q499Z3 407 aa22.63■■□□□ 1.21
CDH11-206ENST00000562998 KBTBD3Q8NAB2 608 aa22.63■■□□□ 1.21
CDH11-206ENST00000562998 MS4A4AQ96JQ5 239 aa22.63■■□□□ 1.21
CDH11-206ENST00000562998 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.63■■□□□ 1.21
CDH11-206ENST00000562998 DHX36Q9H2U1 1008 aaKnown RBP22.63■■□□□ 1.21
CDH11-206ENST00000562998 PRDM10Q9NQV6 1147 aa22.63■■□□□ 1.21
CDH11-206ENST00000562998 RNF186Q9NXI6 227 aa22.63■■□□□ 1.21
CDH11-206ENST00000562998 MANSC4A6NHS7 340 aaPredicted RBP22.62■■□□□ 1.21
CDH11-206ENST00000562998 CHGBP05060 677 aa22.62■■□□□ 1.21
CDH11-206ENST00000562998 INHBEP58166 350 aa22.62■■□□□ 1.21
CDH11-206ENST00000562998 ERO1BQ86YB8 467 aa22.62■■□□□ 1.21
CDH11-206ENST00000562998 MAPKAPK5Q8IW41 473 aa22.62■■□□□ 1.21
CDH11-206ENST00000562998 DDX60LQ5H9U9 1706 aaKnown RBP22.62■■□□□ 1.21
CDH11-206ENST00000562998 MAGEB6P1A0A0J9YX57 407 aa22.61■■□□□ 1.21
CDH11-206ENST00000562998 ERC2O15083 957 aa22.61■■□□□ 1.21
CDH11-206ENST00000562998 GLRX3O76003 335 aaKnown RBP22.61■■□□□ 1.21
CDH11-206ENST00000562998 LBX1P52954 281 aa22.61■■□□□ 1.21
CDH11-206ENST00000562998 SREBF2Q12772 1141 aa22.61■■□□□ 1.21
CDH11-206ENST00000562998 PI4KBQ9UBF8 816 aa22.61■■□□□ 1.21
CDH11-206ENST00000562998 NUCB1Q02818 461 aa22.6■■□□□ 1.21
CDH11-206ENST00000562998 MYH1P12882 1939 aa22.59■■□□□ 1.21
CDH11-206ENST00000562998 PDE1AP54750 535 aa22.59■■□□□ 1.21
CDH11-206ENST00000562998 PPATQ06203 517 aa22.59■■□□□ 1.21
CDH11-206ENST00000562998 LCORLQ8N3X6 602 aa22.59■■□□□ 1.21
CDH11-206ENST00000562998 CFHR5Q9BXR6 569 aa22.59■■□□□ 1.21
CDH11-206ENST00000562998 HERC5Q9UII4 1024 aaKnown RBP22.59■■□□□ 1.21
CDH11-206ENST00000562998 TSKSQ9UJT2 592 aa22.59■■□□□ 1.21
CDH11-206ENST00000562998 PALD1Q9ULE6 856 aa22.59■■□□□ 1.21
CDH11-206ENST00000562998 CTNND1O60716 968 aaKnown RBP22.58■■□□□ 1.21
CDH11-206ENST00000562998 TRPA1O75762 1119 aa22.58■■□□□ 1.21
CDH11-206ENST00000562998 PPIL2Q13356 520 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms