RNA–Protein interactions for RNA: ENST00000562874.2

SF3B3-203, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-203ENST00000562874 FBXO46Q6PJ61 603 aaPredicted RBP19.38■□□□□ 0.69
SF3B3-203ENST00000562874 SNRKQ9NRH2 765 aa19.38■□□□□ 0.69
SF3B3-203ENST00000562874 WDHD1O75717 1129 aaPredicted RBP19.37■□□□□ 0.69
SF3B3-203ENST00000562874 RGS19P49795 217 aa19.37■□□□□ 0.69
SF3B3-203ENST00000562874 PPIL2Q13356 520 aa19.37■□□□□ 0.69
SF3B3-203ENST00000562874 TTC39AQ5SRH9 613 aa19.37■□□□□ 0.69
SF3B3-203ENST00000562874 SH3BP5LQ7L8J4 393 aa19.37■□□□□ 0.69
SF3B3-203ENST00000562874 ZSCAN29Q8IWY8 852 aaPredicted RBP19.37■□□□□ 0.69
SF3B3-203ENST00000562874 TLR7Q9NYK1 1049 aaKnown RBP19.37■□□□□ 0.69
SF3B3-203ENST00000562874 RAI14Q9P0K7 980 aa19.37■□□□□ 0.69
SF3B3-203ENST00000562874 DDTLA6NHG4 134 aaPredicted RBP19.36■□□□□ 0.69
SF3B3-203ENST00000562874 PKN2Q16513 984 aaKnown RBP19.36■□□□□ 0.69
SF3B3-203ENST00000562874 CEP85Q6P2H3 762 aa19.36■□□□□ 0.69
SF3B3-203ENST00000562874 OTOP1Q7RTM1 612 aa19.36■□□□□ 0.69
SF3B3-203ENST00000562874 SLF2Q8IX21 1173 aa19.36■□□□□ 0.69
SF3B3-203ENST00000562874 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.36■□□□□ 0.69
SF3B3-203ENST00000562874 NSUN4Q96CB9 384 aaKnown RBP19.36■□□□□ 0.69
SF3B3-203ENST00000562874 IDI2Q9BXS1 227 aa19.36■□□□□ 0.69
SF3B3-203ENST00000562874 HTTP42858 3142 aa19.36■□□□□ 0.69
SF3B3-203ENST00000562874 TNRC18O15417 2968 aaPredicted RBP19.35■□□□□ 0.69
SF3B3-203ENST00000562874 DDX60LQ5H9U9 1706 aaKnown RBP19.35■□□□□ 0.69
SF3B3-203ENST00000562874 BTBD19C9JJ37 291 aa19.35■□□□□ 0.69
SF3B3-203ENST00000562874 ENTPD3O75355 529 aa19.35■□□□□ 0.69
SF3B3-203ENST00000562874 UQCRFS1P1P0C7P4 283 aa19.35■□□□□ 0.69
SF3B3-203ENST00000562874 RHBDL3P58872 404 aa19.35■□□□□ 0.69
SF3B3-203ENST00000562874 ERO1AQ96HE7 468 aa19.35■□□□□ 0.69
SF3B3-203ENST00000562874 FAM196BA6NMK8 535 aa19.34■□□□□ 0.69
SF3B3-203ENST00000562874 CETPP11597 493 aa19.34■□□□□ 0.69
SF3B3-203ENST00000562874 SP3Q02447 781 aa19.34■□□□□ 0.69
SF3B3-203ENST00000562874 SNAPC2Q13487 334 aa19.34■□□□□ 0.69
SF3B3-203ENST00000562874 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.34■□□□□ 0.69
SF3B3-203ENST00000562874 ZNF112Q9UJU3 913 aa19.34■□□□□ 0.69
SF3B3-203ENST00000562874 DBNLQ9UJU6 430 aaKnown RBP19.34■□□□□ 0.69
SF3B3-203ENST00000562874 EXOC6BQ9Y2D4 811 aa19.34■□□□□ 0.69
SF3B3-203ENST00000562874 PDE4DIPQ5VU43 2346 aa19.33■□□□□ 0.69
SF3B3-203ENST00000562874 GPR75-ASB3A0A0A6YYF3 556 aa19.33■□□□□ 0.68
SF3B3-203ENST00000562874 ECM2O94769 699 aaPredicted RBP19.33■□□□□ 0.68
SF3B3-203ENST00000562874 PPATQ06203 517 aa19.33■□□□□ 0.68
SF3B3-203ENST00000562874 NOL9Q5SY16 702 aaKnown RBP19.33■□□□□ 0.68
SF3B3-203ENST00000562874 FAM163AQ96GL9 167 aaPredicted RBP19.33■□□□□ 0.68
SF3B3-203ENST00000562874 CCDC8Q9H0W5 538 aaPredicted RBP19.33■□□□□ 0.68
SF3B3-203ENST00000562874 ZFYVE28Q9HCC9 887 aa19.33■□□□□ 0.68
SF3B3-203ENST00000562874 GPR108Q9NPR9 543 aa19.33■□□□□ 0.68
SF3B3-203ENST00000562874 LRP2BPQ9P2M1 347 aa19.33■□□□□ 0.68
SF3B3-203ENST00000562874 DOCK3Q8IZD9 2030 aa19.33■□□□□ 0.68
SF3B3-203ENST00000562874 CENPFP49454 3210 aa19.32■□□□□ 0.68
SF3B3-203ENST00000562874 CCDC158Q5M9N0 1113 aa19.32■□□□□ 0.68
SF3B3-203ENST00000562874 NOP58Q9Y2X3 529 aaKnown RBP19.32■□□□□ 0.68
SF3B3-203ENST00000562874 BAZ2AQ9UIF9 1905 aaKnown RBP19.31■□□□□ 0.68
SF3B3-203ENST00000562874 COL2A1P02458 1487 aaPredicted RBP19.31■□□□□ 0.68
SF3B3-203ENST00000562874 GSTO1P78417 241 aa19.31■□□□□ 0.68
SF3B3-203ENST00000562874 CCDC84Q86UT8 332 aaPredicted RBP19.31■□□□□ 0.68
SF3B3-203ENST00000562874 EAF2Q96CJ1 260 aaPredicted RBP19.31■□□□□ 0.68
SF3B3-203ENST00000562874 COG6Q9Y2V7 657 aa19.31■□□□□ 0.68
SF3B3-203ENST00000562874 NDUFB9Q9Y6M9 179 aa19.31■□□□□ 0.68
SF3B3-203ENST00000562874 KIAA0100Q14667 2235 aaKnown RBP19.31■□□□□ 0.68
SF3B3-203ENST00000562874 PHF20L1A8MW92 1017 aa19.3■□□□□ 0.68
SF3B3-203ENST00000562874 CYP2E1P05181 493 aaPredicted RBP19.3■□□□□ 0.68
SF3B3-203ENST00000562874 ZAP70P43403 619 aa19.3■□□□□ 0.68
SF3B3-203ENST00000562874 ADGRA1Q86SQ6 560 aa19.3■□□□□ 0.68
SF3B3-203ENST00000562874 TEX11Q8IYF3 940 aa19.3■□□□□ 0.68
SF3B3-203ENST00000562874 SCYL3Q8IZE3 742 aa19.3■□□□□ 0.68
SF3B3-203ENST00000562874 SH3RF3Q8TEJ3 882 aaPredicted RBP19.3■□□□□ 0.68
SF3B3-203ENST00000562874 EFCC1Q9HA90 598 aa19.3■□□□□ 0.68
SF3B3-203ENST00000562874 PIH1D3Q9NQM4 214 aaKnown RBP19.3■□□□□ 0.68
SF3B3-203ENST00000562874 AATFQ9NY61 560 aaKnown RBP eCLIP19.3■□□□□ 0.68
SF3B3-203ENST00000562874 KCNH4Q9UQ05 1017 aa19.3■□□□□ 0.68
SF3B3-203ENST00000562874 LDHCP07864 332 aa19.29■□□□□ 0.68
SF3B3-203ENST00000562874 NAA16Q6N069 864 aaPredicted RBP19.29■□□□□ 0.68
SF3B3-203ENST00000562874 ARHGAP39Q9C0H5 1083 aa19.29■□□□□ 0.68
SF3B3-203ENST00000562874 PTPN22Q9Y2R2 807 aa19.29■□□□□ 0.68
SF3B3-203ENST00000562874 APBB1O00213 710 aa19.28■□□□□ 0.68
SF3B3-203ENST00000562874 MOGSQ13724 837 aa19.28■□□□□ 0.68
SF3B3-203ENST00000562874 OSBPL5Q9H0X9 879 aaPredicted RBP19.28■□□□□ 0.68
SF3B3-203ENST00000562874 BCL11AQ9H165 835 aa19.28■□□□□ 0.68
SF3B3-203ENST00000562874 IL1RAPL2Q9NP60 686 aa19.28■□□□□ 0.68
SF3B3-203ENST00000562874 PDHXO00330 501 aa19.27■□□□□ 0.68
SF3B3-203ENST00000562874 TLR2O60603 784 aa19.27■□□□□ 0.68
SF3B3-203ENST00000562874 AACSQ86V21 672 aa19.27■□□□□ 0.68
SF3B3-203ENST00000562874 NOL10Q9BSC4 688 aaKnown RBP19.27■□□□□ 0.68
SF3B3-203ENST00000562874 ZCCHC17Q9NP64 241 aaKnown RBP19.27■□□□□ 0.68
SF3B3-203ENST00000562874 PICK1Q9NRD5 415 aa19.27■□□□□ 0.68
SF3B3-203ENST00000562874 CPA4Q9UI42 421 aa19.27■□□□□ 0.68
SF3B3-203ENST00000562874 PTPRAP18433 802 aa19.26■□□□□ 0.67
SF3B3-203ENST00000562874 ANKRD23Q86SG2 305 aa19.26■□□□□ 0.67
SF3B3-203ENST00000562874 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.26■□□□□ 0.67
SF3B3-203ENST00000562874 RCAN3Q9UKA8 241 aa19.26■□□□□ 0.67
SF3B3-203ENST00000562874 PTCH2Q9Y6C5 1203 aa19.26■□□□□ 0.67
SF3B3-203ENST00000562874 ZHX2Q9Y6X8 837 aa19.26■□□□□ 0.67
SF3B3-203ENST00000562874 ADGRA2Q96PE1 1338 aa19.25■□□□□ 0.67
SF3B3-203ENST00000562874 SLC4A8Q2Y0W8 1093 aa19.25■□□□□ 0.67
SF3B3-203ENST00000562874 GADL1Q6ZQY3 521 aa19.25■□□□□ 0.67
SF3B3-203ENST00000562874 MAPKAPK5Q8IW41 473 aa19.25■□□□□ 0.67
SF3B3-203ENST00000562874 BRCA2P51587 3418 aa19.25■□□□□ 0.67
SF3B3-203ENST00000562874 FLT1P17948 1338 aa19.25■□□□□ 0.67
SF3B3-203ENST00000562874 TRIM75PA6NK02 468 aa19.24■□□□□ 0.67
SF3B3-203ENST00000562874 IDH1O75874 414 aaKnown RBP19.24■□□□□ 0.67
SF3B3-203ENST00000562874 MS4A1P11836 297 aa19.24■□□□□ 0.67
SF3B3-203ENST00000562874 DYNLL1P63167 89 aaKnown RBP19.24■□□□□ 0.67
SF3B3-203ENST00000562874 LACTBP83111 547 aaPredicted RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms