RNA–Protein interactions for RNA: ENST00000562785.1

CHD9-205, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-205ENST00000562785 SMARCA2P51531 1590 aa8.66□□□□□ -1.02
CHD9-205ENST00000562785 EIF4G1Q04637 1599 aaKnown RBP8.66□□□□□ -1.02
CHD9-205ENST00000562785 FAM229AH3BQW9 127 aa8.66□□□□□ -1.02
CHD9-205ENST00000562785 LIG1P18858 919 aa8.66□□□□□ -1.02
CHD9-205ENST00000562785 ATP2B1P20020 1258 aa8.66□□□□□ -1.02
CHD9-205ENST00000562785 NASPP49321 788 aaPredicted RBP8.66□□□□□ -1.02
CHD9-205ENST00000562785 PRRT3Q5FWE3 981 aa8.66□□□□□ -1.02
CHD9-205ENST00000562785 IGF2-ASQ6U949 168 aa8.66□□□□□ -1.02
CHD9-205ENST00000562785 BEND7Q8N7W2 519 aaPredicted RBP8.66□□□□□ -1.02
CHD9-205ENST00000562785 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.66□□□□□ -1.02
CHD9-205ENST00000562785 TMPRSS13Q9BYE2 586 aa8.66□□□□□ -1.02
CHD9-205ENST00000562785 STRIP2Q9ULQ0 834 aa8.66□□□□□ -1.02
CHD9-205ENST00000562785 ADAMTS8Q9UP79 889 aa8.66□□□□□ -1.02
CHD9-205ENST00000562785 CNTNAP5Q8WYK1 1306 aa8.65□□□□□ -1.02
CHD9-205ENST00000562785 MEGF11A6BM72 1044 aa8.65□□□□□ -1.02
CHD9-205ENST00000562785 AOC2O75106 756 aa8.65□□□□□ -1.02
CHD9-205ENST00000562785 CDK8P49336 464 aa8.65□□□□□ -1.02
CHD9-205ENST00000562785 INSM1Q01101 510 aaPredicted RBP8.65□□□□□ -1.02
CHD9-205ENST00000562785 WIPI1Q5MNZ9 446 aaPredicted RBP8.65□□□□□ -1.02
CHD9-205ENST00000562785 EXOSC6Q5RKV6 272 aaKnown RBP8.65□□□□□ -1.02
CHD9-205ENST00000562785 KIAA1211Q6ZU35 1233 aa8.65□□□□□ -1.02
CHD9-205ENST00000562785 REXO1Q8N1G1 1221 aaKnown RBP8.65□□□□□ -1.02
CHD9-205ENST00000562785 RUSC1Q9BVN2 902 aa8.65□□□□□ -1.02
CHD9-205ENST00000562785 MRPL18Q9H0U6 180 aaKnown RBP8.65□□□□□ -1.02
CHD9-205ENST00000562785 SNCAIPQ9Y6H5 919 aa8.65□□□□□ -1.02
CHD9-205ENST00000562785 GFRA2O00451 464 aa8.64□□□□□ -1.03
CHD9-205ENST00000562785 ZC3H12AQ5D1E8 599 aaKnown RBP8.64□□□□□ -1.03
CHD9-205ENST00000562785 LRFN4Q6PJG9 635 aa8.64□□□□□ -1.03
CHD9-205ENST00000562785 ACAD11Q709F0 780 aa8.64□□□□□ -1.03
CHD9-205ENST00000562785 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.64□□□□□ -1.03
CHD9-205ENST00000562785 PLPPR2Q96GM1 343 aa8.64□□□□□ -1.03
CHD9-205ENST00000562785 BRMS1Q9HCU9 246 aa8.64□□□□□ -1.03
CHD9-205ENST00000562785 POLR3KQ9Y2Y1 108 aaPredicted RBP8.64□□□□□ -1.03
CHD9-205ENST00000562785 TOP2AP11388 1531 aaKnown RBP8.64□□□□□ -1.03
CHD9-205ENST00000562785 WIZO95785 1651 aa8.63□□□□□ -1.03
CHD9-205ENST00000562785 SPATA31C1P0DKV0 1188 aa8.63□□□□□ -1.03
CHD9-205ENST00000562785 ZNF165P49910 485 aa8.63□□□□□ -1.03
CHD9-205ENST00000562785 INPP5AQ14642 412 aa8.63□□□□□ -1.03
CHD9-205ENST00000562785 HDXQ7Z353 690 aa8.63□□□□□ -1.03
CHD9-205ENST00000562785 RNF208Q9H0X6 261 aa8.63□□□□□ -1.03
CHD9-205ENST00000562785 SUGCTQ9HAC7 445 aa8.63□□□□□ -1.03
CHD9-205ENST00000562785 PPP1R1BQ9UD71 204 aaPredicted RBP8.63□□□□□ -1.03
CHD9-205ENST00000562785 TACC3Q9Y6A5 838 aa8.63□□□□□ -1.03
CHD9-205ENST00000562785 SLFN14P0C7P3 912 aa8.62□□□□□ -1.03
CHD9-205ENST00000562785 CYFIP1Q7L576 1253 aa8.62□□□□□ -1.03
CHD9-205ENST00000562785 EHMT1Q9H9B1 1298 aa8.62□□□□□ -1.03
CHD9-205ENST00000562785 PRR36Q9H6K5 1346 aa8.61□□□□□ -1.03
CHD9-205ENST00000562785 HMGXB3Q12766 1538 aa8.61□□□□□ -1.03
CHD9-205ENST00000562785 TMPRSS2O15393 492 aa8.61□□□□□ -1.03
CHD9-205ENST00000562785 ATE1O95260 518 aa8.61□□□□□ -1.03
CHD9-205ENST00000562785 SSBP05455 408 aaKnown RBP eCLIP8.61□□□□□ -1.03
CHD9-205ENST00000562785 MCM4P33991 863 aa8.61□□□□□ -1.03
CHD9-205ENST00000562785 GTF2F1P35269 517 aaKnown RBP eCLIP8.61□□□□□ -1.03
CHD9-205ENST00000562785 ERVK-24P63145 666 aa8.61□□□□□ -1.03
CHD9-205ENST00000562785 ID3Q02535 119 aa8.61□□□□□ -1.03
CHD9-205ENST00000562785 TMEM130Q8N3G9 435 aa8.61□□□□□ -1.03
CHD9-205ENST00000562785 SMG8Q8ND04 991 aaKnown RBP8.61□□□□□ -1.03
CHD9-205ENST00000562785 DHX38Q92620 1227 aaKnown RBP8.61□□□□□ -1.03
CHD9-205ENST00000562785 ELMO3Q96BJ8 720 aa8.61□□□□□ -1.03
CHD9-205ENST00000562785 SCARF2Q96GP6 870 aaPredicted RBP8.61□□□□□ -1.03
CHD9-205ENST00000562785 SRRTQ9BXP5 876 aaKnown RBP8.61□□□□□ -1.03
CHD9-205ENST00000562785 RAD18Q9NS91 495 aa8.61□□□□□ -1.03
CHD9-205ENST00000562785 ZNRF3Q9ULT6 936 aa8.61□□□□□ -1.03
CHD9-205ENST00000562785 PPT2Q9UMR5 302 aa8.61□□□□□ -1.03
CHD9-205ENST00000562785 DCDC2CA8MYV0 355 aa8.6□□□□□ -1.03
CHD9-205ENST00000562785 F8W735 103 aaPredicted RBP8.6□□□□□ -1.03
CHD9-205ENST00000562785 COL8A1P27658 744 aa8.6□□□□□ -1.03
CHD9-205ENST00000562785 CLCQ05315 142 aa8.6□□□□□ -1.03
CHD9-205ENST00000562785 RING1Q06587 406 aa8.6□□□□□ -1.03
CHD9-205ENST00000562785 GRIK4Q16099 956 aa8.6□□□□□ -1.03
CHD9-205ENST00000562785 NUTM2GQ5VZR2 741 aa8.6□□□□□ -1.03
CHD9-205ENST00000562785 SHISA2Q6UWI4 295 aa8.6□□□□□ -1.03
CHD9-205ENST00000562785 CYP4F12Q9HCS2 524 aa8.6□□□□□ -1.03
CHD9-205ENST00000562785 CRIM1Q9NZV1 1036 aa8.6□□□□□ -1.03
CHD9-205ENST00000562785 PPP1R9AQ9ULJ8 1098 aa8.6□□□□□ -1.03
CHD9-205ENST00000562785 GRIN3BO60391 1043 aa8.59□□□□□ -1.03
CHD9-205ENST00000562785 TIAF1O95411 115 aa8.59□□□□□ -1.03
CHD9-205ENST00000562785 ADH5P11766 374 aa8.59□□□□□ -1.03
CHD9-205ENST00000562785 IMPDH2P12268 514 aa8.59□□□□□ -1.03
CHD9-205ENST00000562785 AKAP4Q5JQC9 854 aa8.59□□□□□ -1.03
CHD9-205ENST00000562785 CCDC81Q6ZN84 652 aa8.59□□□□□ -1.03
CHD9-205ENST00000562785 GK5Q6ZS86 529 aa8.59□□□□□ -1.03
CHD9-205ENST00000562785 LENG1Q96BZ8 264 aaPredicted RBP8.59□□□□□ -1.03
CHD9-205ENST00000562785 SHDQ96IW2 340 aa8.59□□□□□ -1.03
CHD9-205ENST00000562785 FERD3LQ96RJ6 166 aa8.59□□□□□ -1.03
CHD9-205ENST00000562785 HIF3AQ9Y2N7 669 aa8.59□□□□□ -1.03
CHD9-205ENST00000562785 PCDHB14Q9Y5E9 798 aa8.59□□□□□ -1.03
CHD9-205ENST00000562785 STK10O94804 968 aaKnown RBP8.58□□□□□ -1.04
CHD9-205ENST00000562785 RBL2Q08999 1139 aa8.58□□□□□ -1.04
CHD9-205ENST00000562785 ANKRD34AQ69YU3 496 aa8.58□□□□□ -1.04
CHD9-205ENST00000562785 Q6ZS46 218 aa8.58□□□□□ -1.04
CHD9-205ENST00000562785 C12orf40Q86WS4 652 aa8.58□□□□□ -1.04
CHD9-205ENST00000562785 CPLX3Q8WVH0 158 aa8.58□□□□□ -1.04
CHD9-205ENST00000562785 NACC1Q96RE7 527 aa8.58□□□□□ -1.04
CHD9-205ENST00000562785 ZNF408Q9H9D4 720 aa8.58□□□□□ -1.04
CHD9-205ENST00000562785 BAZ1BQ9UIG0 1483 aaKnown RBP8.57□□□□□ -1.04
CHD9-205ENST00000562785 ATAD2BQ9ULI0 1458 aa8.57□□□□□ -1.04
CHD9-205ENST00000562785 HTR3BO95264 441 aa8.57□□□□□ -1.04
CHD9-205ENST00000562785 SOX4Q06945 474 aaPredicted RBP8.57□□□□□ -1.04
CHD9-205ENST00000562785 ALYREFQ86V81 257 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 441 ms