RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 NFXL1Q6ZNB6 911 aa7.95□□□□□ -1.14
SMG1-206ENST00000562668 C3orf58Q8NDZ4 430 aa7.95□□□□□ -1.14
SMG1-206ENST00000562668 FBXL18Q96ME1 805 aa7.95□□□□□ -1.14
SMG1-206ENST00000562668 LGR6Q9HBX8 967 aa7.95□□□□□ -1.14
SMG1-206ENST00000562668 AKAP2Q9Y2D5 859 aa7.95□□□□□ -1.14
SMG1-206ENST00000562668 IVNS1ABPQ9Y6Y0 642 aa7.95□□□□□ -1.14
SMG1-206ENST00000562668 ERCC6Q03468 1493 aa7.94□□□□□ -1.14
SMG1-206ENST00000562668 STK35Q8TDR2 534 aa7.94□□□□□ -1.14
SMG1-206ENST00000562668 KCNB2Q92953 911 aa7.94□□□□□ -1.14
SMG1-206ENST00000562668 ZC3H7BQ9UGR2 993 aaKnown RBP7.94□□□□□ -1.14
SMG1-206ENST00000562668 NME2P22392 152 aa7.93□□□□□ -1.14
SMG1-206ENST00000562668 GSTT1P30711 240 aa7.93□□□□□ -1.14
SMG1-206ENST00000562668 MAPK8P45983 427 aa7.93□□□□□ -1.14
SMG1-206ENST00000562668 KCNA1Q09470 495 aa7.93□□□□□ -1.14
SMG1-206ENST00000562668 CDK5R2Q13319 367 aa7.93□□□□□ -1.14
SMG1-206ENST00000562668 OGFOD3Q6PK18 319 aa7.93□□□□□ -1.14
SMG1-206ENST00000562668 ZSCAN29Q8IWY8 852 aaPredicted RBP7.93□□□□□ -1.14
SMG1-206ENST00000562668 SMYD4Q8IYR2 804 aaPredicted RBP7.93□□□□□ -1.14
SMG1-206ENST00000562668 DISC1Q9NRI5 854 aa7.93□□□□□ -1.14
SMG1-206ENST00000562668 CEP164Q9UPV0 1460 aa7.93□□□□□ -1.14
SMG1-206ENST00000562668 WDR62O43379 1518 aa7.93□□□□□ -1.14
SMG1-206ENST00000562668 ARNTP27540 789 aa7.92□□□□□ -1.14
SMG1-206ENST00000562668 TTLL4Q14679 1199 aa7.92□□□□□ -1.14
SMG1-206ENST00000562668 CYP27C1Q4G0S4 372 aa7.92□□□□□ -1.14
SMG1-206ENST00000562668 FLCNQ8NFG4 579 aa7.92□□□□□ -1.14
SMG1-206ENST00000562668 ASB16Q96NS5 453 aa7.92□□□□□ -1.14
SMG1-206ENST00000562668 EMILIN2Q9BXX0 1053 aa7.92□□□□□ -1.14
SMG1-206ENST00000562668 SRCIN1Q9C0H9 1055 aa7.92□□□□□ -1.14
SMG1-206ENST00000562668 PPM1HQ9ULR3 514 aa7.92□□□□□ -1.14
SMG1-206ENST00000562668 MRC2Q9UBG0 1479 aa7.92□□□□□ -1.14
SMG1-206ENST00000562668 FAM87AP0C7U9 286 aa7.91□□□□□ -1.14
SMG1-206ENST00000562668 HCLS1P14317 486 aaPredicted RBP7.91□□□□□ -1.14
SMG1-206ENST00000562668 ZNF252P-AS1Q0IIN9 211 aa7.91□□□□□ -1.14
SMG1-206ENST00000562668 MAP1SQ66K74 1059 aaPredicted RBP7.91□□□□□ -1.14
SMG1-206ENST00000562668 TP53INP2Q8IXH6 220 aa7.91□□□□□ -1.14
SMG1-206ENST00000562668 NECAB3Q96P71 396 aaPredicted RBP7.91□□□□□ -1.14
SMG1-206ENST00000562668 FMNL2Q96PY5 1086 aa7.91□□□□□ -1.14
SMG1-206ENST00000562668 SETDB2Q96T68 719 aa7.91□□□□□ -1.14
SMG1-206ENST00000562668 URB2Q14146 1524 aaKnown RBP7.91□□□□□ -1.14
SMG1-206ENST00000562668 RNGTTO60942 597 aaKnown RBP7.9□□□□□ -1.14
SMG1-206ENST00000562668 NEFMP07197 916 aa7.9□□□□□ -1.14
SMG1-206ENST00000562668 ALG1LQ6GMV1 187 aa7.9□□□□□ -1.14
SMG1-206ENST00000562668 TPTE2Q6XPS3 522 aa7.9□□□□□ -1.14
SMG1-206ENST00000562668 GPBAR1Q8TDU6 330 aa7.9□□□□□ -1.14
SMG1-206ENST00000562668 CUX2O14529 1486 aa7.89□□□□□ -1.15
SMG1-206ENST00000562668 ENC1O14682 589 aa7.89□□□□□ -1.15
SMG1-206ENST00000562668 ERVK-24P63145 666 aa7.89□□□□□ -1.15
SMG1-206ENST00000562668 ATP2B2Q01814 1243 aa7.89□□□□□ -1.15
SMG1-206ENST00000562668 ZC3H12AQ5D1E8 599 aaKnown RBP7.89□□□□□ -1.15
SMG1-206ENST00000562668 CBLL1Q75N03 491 aa7.89□□□□□ -1.15
SMG1-206ENST00000562668 AGBL5Q8NDL9 886 aa7.89□□□□□ -1.15
SMG1-206ENST00000562668 ACSBG1Q96GR2 724 aa7.89□□□□□ -1.15
SMG1-206ENST00000562668 CEP44Q9C0F1 390 aa7.89□□□□□ -1.15
SMG1-206ENST00000562668 CBX8Q9HC52 389 aa7.89□□□□□ -1.15
SMG1-206ENST00000562668 PAK6Q9NQU5 681 aaPredicted RBP7.89□□□□□ -1.15
SMG1-206ENST00000562668 CACNA2D2Q9NY47 1150 aa7.89□□□□□ -1.15
SMG1-206ENST00000562668 GIPC1O14908 333 aa7.88□□□□□ -1.15
SMG1-206ENST00000562668 ISL2Q96A47 359 aa7.88□□□□□ -1.15
SMG1-206ENST00000562668 OSBPL7Q9BZF2 842 aa7.88□□□□□ -1.15
SMG1-206ENST00000562668 GOLGA2P5Q9HBQ8 144 aa7.88□□□□□ -1.15
SMG1-206ENST00000562668 PCOLCE2Q9UKZ9 415 aa7.88□□□□□ -1.15
SMG1-206ENST00000562668 RNF114Q9Y508 228 aa7.88□□□□□ -1.15
SMG1-206ENST00000562668 SAMM50Q9Y512 469 aa7.88□□□□□ -1.15
SMG1-206ENST00000562668 FBXO24O75426 580 aa7.87□□□□□ -1.15
SMG1-206ENST00000562668 TXKP42681 527 aa7.87□□□□□ -1.15
SMG1-206ENST00000562668 KRTAP19-1Q8IUB9 90 aa7.87□□□□□ -1.15
SMG1-206ENST00000562668 STK11IPQ8N1F8 1099 aa7.87□□□□□ -1.15
SMG1-206ENST00000562668 RNF214Q8ND24 703 aa7.87□□□□□ -1.15
SMG1-206ENST00000562668 ANKRD24Q8TF21 1146 aa7.87□□□□□ -1.15
SMG1-206ENST00000562668 BCL7CQ8WUZ0 217 aaPredicted RBP7.87□□□□□ -1.15
SMG1-206ENST00000562668 WWC3Q9ULE0 1092 aa7.87□□□□□ -1.15
SMG1-206ENST00000562668 SPG7Q9UQ90 795 aa7.87□□□□□ -1.15
SMG1-206ENST00000562668 DNMBPQ6XZF7 1577 aa7.86□□□□□ -1.15
SMG1-206ENST00000562668 PAGE1O75459 146 aa7.86□□□□□ -1.15
SMG1-206ENST00000562668 TRIM37O94972 964 aa7.86□□□□□ -1.15
SMG1-206ENST00000562668 LCE3BQ5TA77 95 aa7.86□□□□□ -1.15
SMG1-206ENST00000562668 WFDC3Q8IUB2 231 aa7.86□□□□□ -1.15
SMG1-206ENST00000562668 KRTAP1-3Q8IUG1 177 aa7.86□□□□□ -1.15
SMG1-206ENST00000562668 FAM181AQ8N9Y4 354 aa7.86□□□□□ -1.15
SMG1-206ENST00000562668 MISP3Q96FF7 219 aa7.86□□□□□ -1.15
SMG1-206ENST00000562668 SLC5A6Q9Y289 635 aa7.86□□□□□ -1.15
SMG1-206ENST00000562668 TOPBP1Q92547 1522 aa7.86□□□□□ -1.15
SMG1-206ENST00000562668 CUX1P39880 1505 aa7.85□□□□□ -1.15
SMG1-206ENST00000562668 LEFTY1O75610 366 aa7.85□□□□□ -1.15
SMG1-206ENST00000562668 P4HBP07237 508 aaKnown RBP7.85□□□□□ -1.15
SMG1-206ENST00000562668 BMP6P22004 513 aa7.85□□□□□ -1.15
SMG1-206ENST00000562668 COL19A1Q14993 1142 aa7.85□□□□□ -1.15
SMG1-206ENST00000562668 LLGL2Q6P1M3 1020 aa7.85□□□□□ -1.15
SMG1-206ENST00000562668 ZNF574Q6ZN55 896 aaPredicted RBP7.85□□□□□ -1.15
SMG1-206ENST00000562668 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.85□□□□□ -1.15
SMG1-206ENST00000562668 PLD6Q8N2A8 252 aaKnown RBP7.85□□□□□ -1.15
SMG1-206ENST00000562668 TOP6BLQ8N6T0 577 aa7.85□□□□□ -1.15
SMG1-206ENST00000562668 NETO1Q8TDF5 533 aa7.85□□□□□ -1.15
SMG1-206ENST00000562668 DUSP23Q9BVJ7 150 aa7.85□□□□□ -1.15
SMG1-206ENST00000562668 C12orf49Q9H741 205 aa7.85□□□□□ -1.15
SMG1-206ENST00000562668 SSU72Q9NP77 194 aaKnown RBP7.85□□□□□ -1.15
SMG1-206ENST00000562668 U3KQE9 123 aa7.85□□□□□ -1.15
SMG1-206ENST00000562668 MPRIPQ6WCQ1 1025 aa7.84□□□□□ -1.15
SMG1-206ENST00000562668 GRIN3AQ8TCU5 1115 aa7.84□□□□□ -1.15
SMG1-206ENST00000562668 FAM8A1Q9UBU6 413 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms