RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 BBOX1O75936 387 aa7.33□□□□□ -1.24
CDH13-206ENST00000562601 CASP7P55210 303 aa7.33□□□□□ -1.24
CDH13-206ENST00000562601 CTSWP56202 376 aa7.33□□□□□ -1.24
CDH13-206ENST00000562601 RPS8P62241 208 aaKnown RBP7.33□□□□□ -1.24
CDH13-206ENST00000562601 SEMA3FQ13275 785 aa7.33□□□□□ -1.24
CDH13-206ENST00000562601 ALDH1L2Q3SY69 923 aa7.33□□□□□ -1.24
CDH13-206ENST00000562601 CCDC152Q4G0S7 254 aa7.33□□□□□ -1.24
CDH13-206ENST00000562601 LCE2AQ5TA79 106 aaPredicted RBP7.33□□□□□ -1.24
CDH13-206ENST00000562601 SP8Q8IXZ3 490 aa7.33□□□□□ -1.24
CDH13-206ENST00000562601 TTLL11Q8NHH1 800 aa7.33□□□□□ -1.24
CDH13-206ENST00000562601 POM121Q96HA1 1249 aa7.33□□□□□ -1.24
CDH13-206ENST00000562601 GPR101Q96P66 508 aaPredicted RBP7.33□□□□□ -1.24
CDH13-206ENST00000562601 SRCIN1Q9C0H9 1055 aa7.33□□□□□ -1.24
CDH13-206ENST00000562601 TMX4Q9H1E5 349 aaPredicted RBP7.33□□□□□ -1.24
CDH13-206ENST00000562601 GREM2Q9H772 168 aa7.33□□□□□ -1.24
CDH13-206ENST00000562601 ZFAND3Q9H8U3 227 aa7.33□□□□□ -1.24
CDH13-206ENST00000562601 RRAGCQ9HB90 399 aa7.33□□□□□ -1.24
CDH13-206ENST00000562601 NMRK2Q9NPI5 230 aa7.33□□□□□ -1.24
CDH13-206ENST00000562601 C9orf78Q9NZ63 289 aaPredicted RBP7.33□□□□□ -1.24
CDH13-206ENST00000562601 TNNQ9UQP3 1299 aa7.33□□□□□ -1.24
CDH13-206ENST00000562601 ZBED9Q6R2W3 1325 aa7.32□□□□□ -1.24
CDH13-206ENST00000562601 ERVH48-1M5A8F1 160 aa7.32□□□□□ -1.24
CDH13-206ENST00000562601 HSP90B1P14625 803 aaKnown RBP7.32□□□□□ -1.24
CDH13-206ENST00000562601 IARSP41252 1262 aaKnown RBP7.32□□□□□ -1.24
CDH13-206ENST00000562601 GPSM2P81274 684 aa7.32□□□□□ -1.24
CDH13-206ENST00000562601 FOXO4P98177 505 aa7.32□□□□□ -1.24
CDH13-206ENST00000562601 EPHA10Q5JZY3 1008 aa7.32□□□□□ -1.24
CDH13-206ENST00000562601 MRPL14Q6P1L8 145 aaKnown RBP7.32□□□□□ -1.24
CDH13-206ENST00000562601 DPP8Q6V1X1 898 aaPredicted RBP7.32□□□□□ -1.24
CDH13-206ENST00000562601 FRAT1Q92837 279 aaPredicted RBP7.32□□□□□ -1.24
CDH13-206ENST00000562601 YTHDC1Q96MU7 727 aaKnown RBP7.32□□□□□ -1.24
CDH13-206ENST00000562601 CEP126Q9P2H0 1117 aa7.32□□□□□ -1.24
CDH13-206ENST00000562601 CHMP3Q9Y3E7 222 aa7.32□□□□□ -1.24
CDH13-206ENST00000562601 COL4A5P29400 1685 aa7.32□□□□□ -1.24
CDH13-206ENST00000562601 PTPRCP08575 1304 aa7.31□□□□□ -1.24
CDH13-206ENST00000562601 LTBP3Q9NS15 1303 aa7.31□□□□□ -1.24
CDH13-206ENST00000562601 GLTPD2A6NH11 291 aa7.31□□□□□ -1.24
CDH13-206ENST00000562601 WTIPA6NIX2 430 aaPredicted RBP7.31□□□□□ -1.24
CDH13-206ENST00000562601 GRM8O00222 908 aa7.31□□□□□ -1.24
CDH13-206ENST00000562601 ALDH1L1O75891 902 aa7.31□□□□□ -1.24
CDH13-206ENST00000562601 DDNO94850 711 aaPredicted RBP7.31□□□□□ -1.24
CDH13-206ENST00000562601 CT47B1P0C2W7 299 aaPredicted RBP7.31□□□□□ -1.24
CDH13-206ENST00000562601 NBPF7P0C2Y1 421 aaPredicted RBP7.31□□□□□ -1.24
CDH13-206ENST00000562601 ITGA6P23229 1130 aa7.31□□□□□ -1.24
CDH13-206ENST00000562601 AOC3Q16853 763 aa7.31□□□□□ -1.24
CDH13-206ENST00000562601 SLFNL1Q499Z3 407 aa7.31□□□□□ -1.24
CDH13-206ENST00000562601 CC2D2BQ6DHV5 1058 aa7.31□□□□□ -1.24
CDH13-206ENST00000562601 ANKRD18AQ8IVF6 992 aa7.31□□□□□ -1.24
CDH13-206ENST00000562601 LARGE2Q8N3Y3 721 aa7.31□□□□□ -1.24
CDH13-206ENST00000562601 MEIOBQ8N635 442 aa7.31□□□□□ -1.24
CDH13-206ENST00000562601 SNED1Q8TER0 1413 aa7.31□□□□□ -1.24
CDH13-206ENST00000562601 SUCLG2Q96I99 432 aa7.31□□□□□ -1.24
CDH13-206ENST00000562601 PSMD1Q99460 953 aa7.31□□□□□ -1.24
CDH13-206ENST00000562601 TSEN34Q9BSV6 310 aaKnown RBP7.31□□□□□ -1.24
CDH13-206ENST00000562601 NSFL1CQ9UNZ2 370 aaKnown RBP7.31□□□□□ -1.24
CDH13-206ENST00000562601 GTF3C3Q9Y5Q9 886 aa7.31□□□□□ -1.24
CDH13-206ENST00000562601 ZNF541Q9H0D2 1346 aa7.3□□□□□ -1.24
CDH13-206ENST00000562601 LRRC37AA6NMS7 1700 aa7.3□□□□□ -1.24
CDH13-206ENST00000562601 A6NJR5 290 aa7.3□□□□□ -1.24
CDH13-206ENST00000562601 PPIP5K2O43314 1243 aa7.3□□□□□ -1.24
CDH13-206ENST00000562601 CSF1RP07333 972 aa7.3□□□□□ -1.24
CDH13-206ENST00000562601 BMP1P13497 986 aa7.3□□□□□ -1.24
CDH13-206ENST00000562601 LMBR1LQ6UX01 489 aa7.3□□□□□ -1.24
CDH13-206ENST00000562601 Q6ZVU0 165 aa7.3□□□□□ -1.24
CDH13-206ENST00000562601 CLUAP1Q96AJ1 413 aa7.3□□□□□ -1.24
CDH13-206ENST00000562601 KAZALD1Q96I82 304 aa7.3□□□□□ -1.24
CDH13-206ENST00000562601 ZNF594Q96JF6 807 aaPredicted RBP7.3□□□□□ -1.24
CDH13-206ENST00000562601 PLA2G12BQ9BX93 195 aa7.3□□□□□ -1.24
CDH13-206ENST00000562601 ANKIB1Q9P2G1 1089 aa7.3□□□□□ -1.24
CDH13-206ENST00000562601 POLLQ9UGP5 575 aa7.3□□□□□ -1.24
CDH13-206ENST00000562601 DACH1Q9UI36 760 aa7.3□□□□□ -1.24
CDH13-206ENST00000562601 GJA3Q9Y6H8 435 aa7.3□□□□□ -1.24
CDH13-206ENST00000562601 KDM2BQ8NHM5 1336 aa7.29□□□□□ -1.24
CDH13-206ENST00000562601 DUOX1Q9NRD9 1551 aa7.29□□□□□ -1.24
CDH13-206ENST00000562601 ANKRD18BA2A2Z9 1011 aa7.29□□□□□ -1.24
CDH13-206ENST00000562601 UFL1O94874 794 aa7.29□□□□□ -1.24
CDH13-206ENST00000562601 IGHMBP2P38935 993 aaKnown RBP7.29□□□□□ -1.24
CDH13-206ENST00000562601 TMC4Q7Z404 712 aa7.29□□□□□ -1.24
CDH13-206ENST00000562601 TRIM46Q7Z4K8 759 aa7.29□□□□□ -1.24
CDH13-206ENST00000562601 NIM1KQ8IY84 436 aa7.29□□□□□ -1.24
CDH13-206ENST00000562601 LINC00528Q8N1L1 170 aa7.29□□□□□ -1.24
CDH13-206ENST00000562601 TBC1D16Q8TBP0 767 aa7.29□□□□□ -1.24
CDH13-206ENST00000562601 JDP2Q8WYK2 163 aa7.29□□□□□ -1.24
CDH13-206ENST00000562601 TRIM47Q96LD4 638 aa7.29□□□□□ -1.24
CDH13-206ENST00000562601 CDC5LQ99459 802 aaKnown RBP7.29□□□□□ -1.24
CDH13-206ENST00000562601 RTFDC1Q9BY42 306 aaPredicted RBP7.29□□□□□ -1.24
CDH13-206ENST00000562601 API5Q9BZZ5 524 aaKnown RBP7.29□□□□□ -1.24
CDH13-206ENST00000562601 USP44Q9H0E7 712 aa7.29□□□□□ -1.24
CDH13-206ENST00000562601 BICC1Q9H694 974 aaKnown RBP7.29□□□□□ -1.24
CDH13-206ENST00000562601 KCNQ5Q9NR82 932 aa7.29□□□□□ -1.24
CDH13-206ENST00000562601 TMPRSS4Q9NRS4 437 aa7.29□□□□□ -1.24
CDH13-206ENST00000562601 GMPR2Q9P2T1 348 aaKnown RBP7.29□□□□□ -1.24
CDH13-206ENST00000562601 MINPP1Q9UNW1 487 aa7.29□□□□□ -1.24
CDH13-206ENST00000562601 LTBP1Q14766 1721 aa7.29□□□□□ -1.24
CDH13-206ENST00000562601 FZD9O00144 591 aa7.28□□□□□ -1.24
CDH13-206ENST00000562601 PLIN1O60240 522 aa7.28□□□□□ -1.24
CDH13-206ENST00000562601 TAF5LO75529 589 aa7.28□□□□□ -1.24
CDH13-206ENST00000562601 RAD17O75943 681 aa7.28□□□□□ -1.24
CDH13-206ENST00000562601 TRIM27P14373 513 aa7.28□□□□□ -1.24
CDH13-206ENST00000562601 CCT4P50991 539 aaKnown RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms