RNA–Protein interactions for RNA: ENST00000562404.1

LPCAT4-202, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-202ENST00000562404 ATAD5Q96QE3 1844 aa13.6□□□□□ -0.23
LPCAT4-202ENST00000562404 TESPA1A2RU30 521 aaPredicted RBP13.6□□□□□ -0.23
LPCAT4-202ENST00000562404 SPDYE5A6NIY4 337 aa13.6□□□□□ -0.23
LPCAT4-202ENST00000562404 ENTPD3O75355 529 aa13.6□□□□□ -0.23
LPCAT4-202ENST00000562404 DGKZQ13574 1117 aa13.6□□□□□ -0.23
LPCAT4-202ENST00000562404 DOCK1Q14185 1865 aa13.6□□□□□ -0.23
LPCAT4-202ENST00000562404 BRI3BPQ8WY22 251 aa13.6□□□□□ -0.23
LPCAT4-202ENST00000562404 OTUD5Q96G74 571 aa13.6□□□□□ -0.23
LPCAT4-202ENST00000562404 YTHDC1Q96MU7 727 aaKnown RBP13.6□□□□□ -0.23
LPCAT4-202ENST00000562404 CFHR5Q9BXR6 569 aa13.6□□□□□ -0.23
LPCAT4-202ENST00000562404 ZNF341Q9BYN7 854 aa13.6□□□□□ -0.23
LPCAT4-202ENST00000562404 LRP2BPQ9P2M1 347 aa13.6□□□□□ -0.23
LPCAT4-202ENST00000562404 ZSWIM8A7E2V4 1837 aa13.6□□□□□ -0.23
LPCAT4-202ENST00000562404 GPR25O00155 361 aa13.59□□□□□ -0.23
LPCAT4-202ENST00000562404 IRF6O14896 467 aa13.59□□□□□ -0.23
LPCAT4-202ENST00000562404 DCAF15Q66K64 600 aa13.59□□□□□ -0.23
LPCAT4-202ENST00000562404 ERC1Q8IUD2 1116 aa13.59□□□□□ -0.23
LPCAT4-202ENST00000562404 SLF2Q8IX21 1173 aa13.59□□□□□ -0.23
LPCAT4-202ENST00000562404 SH3RF3Q8TEJ3 882 aaPredicted RBP13.59□□□□□ -0.23
LPCAT4-202ENST00000562404 CSADQ9Y600 493 aa13.59□□□□□ -0.23
LPCAT4-202ENST00000562404 MYH1P12882 1939 aa13.58□□□□□ -0.23
LPCAT4-202ENST00000562404 FAM196BA6NMK8 535 aa13.58□□□□□ -0.24
LPCAT4-202ENST00000562404 PHF20L1A8MW92 1017 aa13.58□□□□□ -0.24
LPCAT4-202ENST00000562404 INHBEP58166 350 aa13.58□□□□□ -0.24
LPCAT4-202ENST00000562404 CAP1Q01518 475 aa13.58□□□□□ -0.24
LPCAT4-202ENST00000562404 MAP3K10Q02779 954 aa13.58□□□□□ -0.24
LPCAT4-202ENST00000562404 NAA16Q6N069 864 aaPredicted RBP13.58□□□□□ -0.24
LPCAT4-202ENST00000562404 BCL11AQ9H165 835 aa13.58□□□□□ -0.24
LPCAT4-202ENST00000562404 AATFQ9NY61 560 aaKnown RBP eCLIP13.58□□□□□ -0.24
LPCAT4-202ENST00000562404 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.58□□□□□ -0.24
LPCAT4-202ENST00000562404 CCL15-CCL14A0A0B4J2E2 113 aa13.57□□□□□ -0.24
LPCAT4-202ENST00000562404 LDHCP07864 332 aa13.57□□□□□ -0.24
LPCAT4-202ENST00000562404 DYNLL1P63167 89 aaKnown RBP13.57□□□□□ -0.24
LPCAT4-202ENST00000562404 GSTO1P78417 241 aa13.57□□□□□ -0.24
LPCAT4-202ENST00000562404 CRHR2Q13324 411 aa13.57□□□□□ -0.24
LPCAT4-202ENST00000562404 CCL15Q16663 113 aa13.57□□□□□ -0.24
LPCAT4-202ENST00000562404 ERO1BQ86YB8 467 aa13.57□□□□□ -0.24
LPCAT4-202ENST00000562404 FAM43AQ8N2R8 423 aa13.57□□□□□ -0.24
LPCAT4-202ENST00000562404 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.57□□□□□ -0.24
LPCAT4-202ENST00000562404 HOOK2Q96ED9 719 aa13.57□□□□□ -0.24
LPCAT4-202ENST00000562404 KIF1BPQ96EK5 621 aa13.57□□□□□ -0.24
LPCAT4-202ENST00000562404 MYH7P12883 1935 aa13.56□□□□□ -0.24
LPCAT4-202ENST00000562404 SMARCA5O60264 1052 aaPredicted RBP13.56□□□□□ -0.24
LPCAT4-202ENST00000562404 HMMRO75330 724 aa13.56□□□□□ -0.24
LPCAT4-202ENST00000562404 PPIL2Q13356 520 aa13.56□□□□□ -0.24
LPCAT4-202ENST00000562404 RRP1BQ14684 758 aaKnown RBP13.56□□□□□ -0.24
LPCAT4-202ENST00000562404 HSP90AB4PQ58FF6 505 aa13.56□□□□□ -0.24
LPCAT4-202ENST00000562404 NOM1Q5C9Z4 860 aaKnown RBP13.56□□□□□ -0.24
LPCAT4-202ENST00000562404 NOL9Q5SY16 702 aaKnown RBP13.56□□□□□ -0.24
LPCAT4-202ENST00000562404 ZSCAN29Q8IWY8 852 aaPredicted RBP13.56□□□□□ -0.24
LPCAT4-202ENST00000562404 TEX11Q8IYF3 940 aa13.56□□□□□ -0.24
LPCAT4-202ENST00000562404 EDC3Q96F86 508 aaKnown RBP13.56□□□□□ -0.24
LPCAT4-202ENST00000562404 OSBPL5Q9H0X9 879 aaPredicted RBP13.56□□□□□ -0.24
LPCAT4-202ENST00000562404 HTTP42858 3142 aa13.55□□□□□ -0.24
LPCAT4-202ENST00000562404 RAB11FIP3O75154 756 aa13.55□□□□□ -0.24
LPCAT4-202ENST00000562404 NPM3O75607 178 aaKnown RBP13.55□□□□□ -0.24
LPCAT4-202ENST00000562404 IDH1O75874 414 aaKnown RBP13.55□□□□□ -0.24
LPCAT4-202ENST00000562404 ALDH1A1P00352 501 aa13.55□□□□□ -0.24
LPCAT4-202ENST00000562404 GTF2A2P52657 109 aa13.55□□□□□ -0.24
LPCAT4-202ENST00000562404 RRP1P56182 461 aaKnown RBP13.55□□□□□ -0.24
LPCAT4-202ENST00000562404 PPP4CP60510 307 aa13.55□□□□□ -0.24
LPCAT4-202ENST00000562404 MOGSQ13724 837 aa13.55□□□□□ -0.24
LPCAT4-202ENST00000562404 CTU1Q7Z7A3 348 aaKnown RBP13.55□□□□□ -0.24
LPCAT4-202ENST00000562404 CCDC84Q86UT8 332 aaPredicted RBP13.55□□□□□ -0.24
LPCAT4-202ENST00000562404 CLASRPQ8N2M8 674 aaKnown RBP13.55□□□□□ -0.24
LPCAT4-202ENST00000562404 PCDHB15Q9Y5E8 787 aa13.55□□□□□ -0.24
LPCAT4-202ENST00000562404 COL2A1P02458 1487 aaPredicted RBP13.55□□□□□ -0.24
LPCAT4-202ENST00000562404 DDX60LQ5H9U9 1706 aaKnown RBP13.54□□□□□ -0.24
LPCAT4-202ENST00000562404 BTBD19C9JJ37 291 aa13.54□□□□□ -0.24
LPCAT4-202ENST00000562404 FKTNO75072 461 aa13.54□□□□□ -0.24
LPCAT4-202ENST00000562404 CYP7A1P22680 504 aa13.54□□□□□ -0.24
LPCAT4-202ENST00000562404 PPATQ06203 517 aa13.54□□□□□ -0.24
LPCAT4-202ENST00000562404 MAPKAPK5Q8IW41 473 aa13.54□□□□□ -0.24
LPCAT4-202ENST00000562404 MAGEB6Q8N7X4 407 aa13.54□□□□□ -0.24
LPCAT4-202ENST00000562404 MIGA1Q8NAN2 632 aa13.54□□□□□ -0.24
LPCAT4-202ENST00000562404 TGFBRAP1Q8WUH2 860 aa13.54□□□□□ -0.24
LPCAT4-202ENST00000562404 CHMP4BQ9H444 224 aaKnown RBP13.54□□□□□ -0.24
LPCAT4-202ENST00000562404 KCNH4Q9UQ05 1017 aa13.54□□□□□ -0.24
LPCAT4-202ENST00000562404 CENPFP49454 3210 aa13.53□□□□□ -0.24
LPCAT4-202ENST00000562404 CCDC85CA6NKD9 419 aa13.53□□□□□ -0.24
LPCAT4-202ENST00000562404 MAP4K4O95819 1239 aaPredicted RBP13.53□□□□□ -0.24
LPCAT4-202ENST00000562404 CHGBP05060 677 aa13.53□□□□□ -0.24
LPCAT4-202ENST00000562404 IFIT2P09913 472 aaKnown RBP13.53□□□□□ -0.24
LPCAT4-202ENST00000562404 SLFNL1Q499Z3 407 aa13.53□□□□□ -0.24
LPCAT4-202ENST00000562404 SCYL3Q8IZE3 742 aa13.53□□□□□ -0.24
LPCAT4-202ENST00000562404 DNAJC18Q9H819 358 aa13.53□□□□□ -0.24
LPCAT4-202ENST00000562404 FLT1P17948 1338 aa13.53□□□□□ -0.24
LPCAT4-202ENST00000562404 NAV1Q8NEY1 1877 aa13.53□□□□□ -0.24
LPCAT4-202ENST00000562404 GOLIM4O00461 696 aa13.52□□□□□ -0.25
LPCAT4-202ENST00000562404 TBC1D12O60347 775 aa13.52□□□□□ -0.25
LPCAT4-202ENST00000562404 CETPP11597 493 aa13.52□□□□□ -0.25
LPCAT4-202ENST00000562404 PTPRAP18433 802 aa13.52□□□□□ -0.25
LPCAT4-202ENST00000562404 JAG1P78504 1218 aa13.52□□□□□ -0.25
LPCAT4-202ENST00000562404 SNAPC2Q13487 334 aa13.52□□□□□ -0.25
LPCAT4-202ENST00000562404 TAF1CQ15572 869 aaPredicted RBP13.52□□□□□ -0.25
LPCAT4-202ENST00000562404 SHROOM1Q2M3G4 852 aaPredicted RBP13.52□□□□□ -0.25
LPCAT4-202ENST00000562404 CD99L2Q8TCZ2 262 aa13.52□□□□□ -0.25
LPCAT4-202ENST00000562404 BOLA2Q9H3K6 86 aa13.52□□□□□ -0.25
LPCAT4-202ENST00000562404 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.52□□□□□ -0.25
LPCAT4-202ENST00000562404 BAZ2AQ9UIF9 1905 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms