RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 ROBO3Q96MS0 1386 aa16.87■□□□□ 0.29
COMMD4-205ENST00000562310 YDJCA8MPS7 323 aa16.86■□□□□ 0.29
COMMD4-205ENST00000562310 MINDY4BA8MYZ0 360 aa16.86■□□□□ 0.29
COMMD4-205ENST00000562310 PRC1O43663 620 aa16.86■□□□□ 0.29
COMMD4-205ENST00000562310 DDIT3P35638 169 aa16.86■□□□□ 0.29
COMMD4-205ENST00000562310 CTR9Q6PD62 1173 aa16.86■□□□□ 0.29
COMMD4-205ENST00000562310 CHMP4CQ96CF2 233 aa16.86■□□□□ 0.29
COMMD4-205ENST00000562310 MKRN1Q9UHC7 482 aaKnown RBP16.86■□□□□ 0.29
COMMD4-205ENST00000562310 SERPINA10Q9UK55 444 aa16.86■□□□□ 0.29
COMMD4-205ENST00000562310 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.86■□□□□ 0.29
COMMD4-205ENST00000562310 NEDD4P46934 1319 aa16.86■□□□□ 0.29
COMMD4-205ENST00000562310 USP17L12C9JPN9 530 aa16.85■□□□□ 0.29
COMMD4-205ENST00000562310 USP17L21D6R901 530 aa16.85■□□□□ 0.29
COMMD4-205ENST00000562310 F8W031 263 aaPredicted RBP16.85■□□□□ 0.29
COMMD4-205ENST00000562310 NFKBIEO00221 500 aa16.85■□□□□ 0.29
COMMD4-205ENST00000562310 CRKP46108 304 aa16.85■□□□□ 0.29
COMMD4-205ENST00000562310 RHBDL3P58872 404 aa16.85■□□□□ 0.29
COMMD4-205ENST00000562310 CTDSPL2Q05D32 466 aa16.85■□□□□ 0.29
COMMD4-205ENST00000562310 RSBN1LQ6PCB5 846 aaPredicted RBP16.85■□□□□ 0.29
COMMD4-205ENST00000562310 JDP2Q8WYK2 163 aa16.85■□□□□ 0.29
COMMD4-205ENST00000562310 TMEM87BQ96K49 555 aa16.85■□□□□ 0.29
COMMD4-205ENST00000562310 TCEANC2Q96MN5 208 aa16.85■□□□□ 0.29
COMMD4-205ENST00000562310 ZDHHC15Q96MV8 337 aa16.85■□□□□ 0.29
COMMD4-205ENST00000562310 MXD3Q9BW11 206 aa16.85■□□□□ 0.29
COMMD4-205ENST00000562310 MCM9Q9NXL9 1143 aa16.85■□□□□ 0.29
COMMD4-205ENST00000562310 TPCN1Q9ULQ1 816 aa16.85■□□□□ 0.29
COMMD4-205ENST00000562310 FGRP09769 529 aa16.84■□□□□ 0.29
COMMD4-205ENST00000562310 COL9A3Q14050 684 aaPredicted RBP16.84■□□□□ 0.29
COMMD4-205ENST00000562310 KIAA0825Q8IV33 1275 aa16.84■□□□□ 0.29
COMMD4-205ENST00000562310 NLGN2Q8NFZ4 835 aa16.84■□□□□ 0.29
COMMD4-205ENST00000562310 ESR2Q92731 530 aa16.84■□□□□ 0.29
COMMD4-205ENST00000562310 BRF1Q92994 677 aa16.84■□□□□ 0.29
COMMD4-205ENST00000562310 KCNQ5Q9NR82 932 aa16.84■□□□□ 0.29
COMMD4-205ENST00000562310 FLT1P17948 1338 aa16.84■□□□□ 0.29
COMMD4-205ENST00000562310 DICER1Q9UPY3 1922 aaKnown RBP16.84■□□□□ 0.29
COMMD4-205ENST00000562310 B4E1Z4 1266 aa16.83■□□□□ 0.28
COMMD4-205ENST00000562310 ORC4O43929 436 aa16.83■□□□□ 0.28
COMMD4-205ENST00000562310 VIL1P09327 827 aaKnown RBP16.83■□□□□ 0.28
COMMD4-205ENST00000562310 MMP14P50281 582 aa16.83■□□□□ 0.28
COMMD4-205ENST00000562310 SCNN1DP51172 638 aa16.83■□□□□ 0.28
COMMD4-205ENST00000562310 EVCP57679 992 aa16.83■□□□□ 0.28
COMMD4-205ENST00000562310 ANTXR2P58335 489 aa16.83■□□□□ 0.28
COMMD4-205ENST00000562310 PDE4BQ07343 736 aa16.83■□□□□ 0.28
COMMD4-205ENST00000562310 SART3Q15020 963 aaKnown RBP16.83■□□□□ 0.28
COMMD4-205ENST00000562310 ME3Q16798 604 aa16.83■□□□□ 0.28
COMMD4-205ENST00000562310 C12orf60Q5U649 245 aa16.83■□□□□ 0.28
COMMD4-205ENST00000562310 TGFBRAP1Q8WUH2 860 aa16.83■□□□□ 0.28
COMMD4-205ENST00000562310 YY1P25490 414 aa16.82■□□□□ 0.28
COMMD4-205ENST00000562310 MAPKAPK5Q8IW41 473 aa16.82■□□□□ 0.28
COMMD4-205ENST00000562310 AGBL3Q8NEM8 1001 aa16.82■□□□□ 0.28
COMMD4-205ENST00000562310 ZNF274Q96GC6 653 aaPredicted RBP16.82■□□□□ 0.28
COMMD4-205ENST00000562310 ZNF287Q9HBT7 754 aa16.82■□□□□ 0.28
COMMD4-205ENST00000562310 TOMM22Q9NS69 142 aa16.82■□□□□ 0.28
COMMD4-205ENST00000562310 FOXD4L1Q9NU39 408 aa16.82■□□□□ 0.28
COMMD4-205ENST00000562310 HDAC9Q9UKV0 1011 aa16.82■□□□□ 0.28
COMMD4-205ENST00000562310 ANGEL1Q9UNK9 670 aaKnown RBP16.82■□□□□ 0.28
COMMD4-205ENST00000562310 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.82■□□□□ 0.28
COMMD4-205ENST00000562310 MYH8P13535 1937 aa16.81■□□□□ 0.28
COMMD4-205ENST00000562310 PSMD14O00487 310 aa16.81■□□□□ 0.28
COMMD4-205ENST00000562310 SH2B2O14492 632 aaPredicted RBP16.81■□□□□ 0.28
COMMD4-205ENST00000562310 PFKFB2O60825 505 aa16.81■□□□□ 0.28
COMMD4-205ENST00000562310 KDM4AO75164 1064 aa16.81■□□□□ 0.28
COMMD4-205ENST00000562310 NPM3O75607 178 aaKnown RBP16.81■□□□□ 0.28
COMMD4-205ENST00000562310 LARGE1O95461 756 aa16.81■□□□□ 0.28
COMMD4-205ENST00000562310 NUCB2P80303 420 aa16.81■□□□□ 0.28
COMMD4-205ENST00000562310 TNIP1Q15025 636 aa16.81■□□□□ 0.28
COMMD4-205ENST00000562310 APOBEC3HQ6NTF7 200 aaKnown RBP16.81■□□□□ 0.28
COMMD4-205ENST00000562310 CYB5R4Q7L1T6 521 aa16.81■□□□□ 0.28
COMMD4-205ENST00000562310 CCDC83Q8IWF9 413 aa16.81■□□□□ 0.28
COMMD4-205ENST00000562310 GTF3C6Q969F1 213 aa16.81■□□□□ 0.28
COMMD4-205ENST00000562310 LRRC2Q9BYS8 371 aa16.81■□□□□ 0.28
COMMD4-205ENST00000562310 USP40Q9NVE5 1235 aa16.81■□□□□ 0.28
COMMD4-205ENST00000562310 TAOK2Q9UL54 1235 aa16.81■□□□□ 0.28
COMMD4-205ENST00000562310 CYP2D7A0A087X1C5 515 aa16.8■□□□□ 0.28
COMMD4-205ENST00000562310 ERICH2A1L162 156 aa16.8■□□□□ 0.28
COMMD4-205ENST00000562310 RAD17O75943 681 aa16.8■□□□□ 0.28
COMMD4-205ENST00000562310 POLR3DP05423 398 aaPredicted RBP16.8■□□□□ 0.28
COMMD4-205ENST00000562310 USP17L8P0C7I0 530 aa16.8■□□□□ 0.28
COMMD4-205ENST00000562310 LIFRP42702 1097 aa16.8■□□□□ 0.28
COMMD4-205ENST00000562310 RRP12Q5JTH9 1297 aaKnown RBP16.8■□□□□ 0.28
COMMD4-205ENST00000562310 CIAPIN1Q6FI81 312 aa16.8■□□□□ 0.28
COMMD4-205ENST00000562310 CDC42EP5Q6NZY7 148 aa16.8■□□□□ 0.28
COMMD4-205ENST00000562310 CHST3Q7LGC8 479 aa16.8■□□□□ 0.28
COMMD4-205ENST00000562310 GMLQ99445 158 aa16.8■□□□□ 0.28
COMMD4-205ENST00000562310 LARP6Q9BRS8 491 aaKnown RBP16.8■□□□□ 0.28
COMMD4-205ENST00000562310 FHDC1Q9C0D6 1143 aaPredicted RBP16.8■□□□□ 0.28
COMMD4-205ENST00000562310 SMC3Q9UQE7 1217 aa16.8■□□□□ 0.28
COMMD4-205ENST00000562310 COL2A1P02458 1487 aaPredicted RBP16.8■□□□□ 0.28
COMMD4-205ENST00000562310 WDHD1O75717 1129 aaPredicted RBP16.79■□□□□ 0.28
COMMD4-205ENST00000562310 CYP2D6P10635 497 aa16.79■□□□□ 0.28
COMMD4-205ENST00000562310 PDIA4P13667 645 aaKnown RBP16.79■□□□□ 0.28
COMMD4-205ENST00000562310 RPS12P25398 132 aaKnown RBP16.79■□□□□ 0.28
COMMD4-205ENST00000562310 RBM5P52756 815 aaKnown RBP eCLIP16.79■□□□□ 0.28
COMMD4-205ENST00000562310 APOBRQ0VD83 1088 aa16.79■□□□□ 0.28
COMMD4-205ENST00000562310 TMEM67Q5HYA8 995 aa16.79■□□□□ 0.28
COMMD4-205ENST00000562310 SGMS1Q86VZ5 419 aa16.79■□□□□ 0.28
COMMD4-205ENST00000562310 TMTC2Q8N394 836 aa16.79■□□□□ 0.28
COMMD4-205ENST00000562310 OGFOD1Q8N543 542 aa16.79■□□□□ 0.28
COMMD4-205ENST00000562310 LLPHQ9BRT6 129 aaKnown RBP16.79■□□□□ 0.28
COMMD4-205ENST00000562310 UBAC1Q9BSL1 405 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms