RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 ADGRF5Q8IZF2 1346 aa8.27□□□□□ -1.09
UBR1-203ENST00000562173 FAM83GA6ND36 823 aa8.26□□□□□ -1.09
UBR1-203ENST00000562173 GHRHP01286 108 aa8.26□□□□□ -1.09
UBR1-203ENST00000562173 EIF2AK2P19525 551 aaKnown RBP8.26□□□□□ -1.09
UBR1-203ENST00000562173 YY1P25490 414 aa8.26□□□□□ -1.09
UBR1-203ENST00000562173 ATP2B2Q01814 1243 aa8.26□□□□□ -1.09
UBR1-203ENST00000562173 PLCB3Q01970 1234 aa8.26□□□□□ -1.09
UBR1-203ENST00000562173 ORC1Q13415 861 aa8.26□□□□□ -1.09
UBR1-203ENST00000562173 GPAT2Q6NUI2 795 aa8.26□□□□□ -1.09
UBR1-203ENST00000562173 KRT27Q7Z3Y8 459 aa8.26□□□□□ -1.09
UBR1-203ENST00000562173 GALNT12Q8IXK2 581 aa8.26□□□□□ -1.09
UBR1-203ENST00000562173 NSUN5Q96P11 429 aaKnown RBP8.26□□□□□ -1.09
UBR1-203ENST00000562173 NIF3L1Q9GZT8 377 aa8.26□□□□□ -1.09
UBR1-203ENST00000562173 SALL4Q9UJQ4 1053 aa8.26□□□□□ -1.09
UBR1-203ENST00000562173 MYOM1P52179 1685 aa8.26□□□□□ -1.09
UBR1-203ENST00000562173 SPATA31A3Q5VYP0 1347 aa8.26□□□□□ -1.09
UBR1-203ENST00000562173 KNDC1Q76NI1 1749 aa8.26□□□□□ -1.09
UBR1-203ENST00000562173 ALS2Q96Q42 1657 aa8.25□□□□□ -1.09
UBR1-203ENST00000562173 LOC102724428A0A0B4J2F2 783 aa8.25□□□□□ -1.09
UBR1-203ENST00000562173 ZBTB42B2RXF5 422 aa8.25□□□□□ -1.09
UBR1-203ENST00000562173 PIK3R2O00459 728 aa8.25□□□□□ -1.09
UBR1-203ENST00000562173 EREGO14944 169 aa8.25□□□□□ -1.09
UBR1-203ENST00000562173 CYP2E1P05181 493 aaPredicted RBP8.25□□□□□ -1.09
UBR1-203ENST00000562173 SIK1P57059 783 aa8.25□□□□□ -1.09
UBR1-203ENST00000562173 PTF1AQ7RTS3 328 aa8.25□□□□□ -1.09
UBR1-203ENST00000562173 CACTIN-AS1Q8N1I8 211 aa8.25□□□□□ -1.09
UBR1-203ENST00000562173 IGFLR1Q9H665 355 aa8.25□□□□□ -1.09
UBR1-203ENST00000562173 KANSL3Q9P2N6 904 aa8.25□□□□□ -1.09
UBR1-203ENST00000562173 P4HBP07237 508 aaKnown RBP8.24□□□□□ -1.09
UBR1-203ENST00000562173 AMPD1P23109 780 aa8.24□□□□□ -1.09
UBR1-203ENST00000562173 DGKGP49619 791 aa8.24□□□□□ -1.09
UBR1-203ENST00000562173 SAFB2Q14151 953 aaKnown RBP eCLIP8.24□□□□□ -1.09
UBR1-203ENST00000562173 ALG1LQ6GMV1 187 aa8.24□□□□□ -1.09
UBR1-203ENST00000562173 LINC00114Q6XXX2 140 aa8.24□□□□□ -1.09
UBR1-203ENST00000562173 KRT28Q7Z3Y7 464 aa8.24□□□□□ -1.09
UBR1-203ENST00000562173 NCAPG2Q86XI2 1143 aa8.24□□□□□ -1.09
UBR1-203ENST00000562173 BTBD6Q96KE9 485 aa8.24□□□□□ -1.09
UBR1-203ENST00000562173 LPIN3Q9BQK8 851 aa8.24□□□□□ -1.09
UBR1-203ENST00000562173 MKL2Q9ULH7 1088 aa8.24□□□□□ -1.09
UBR1-203ENST00000562173 STARD13Q9Y3M8 1113 aa8.24□□□□□ -1.09
UBR1-203ENST00000562173 SBF2Q86WG5 1849 aa8.24□□□□□ -1.09
UBR1-203ENST00000562173 KIF1AQ12756 1690 aa8.24□□□□□ -1.09
UBR1-203ENST00000562173 NRKQ7Z2Y5 1582 aa8.23□□□□□ -1.09
UBR1-203ENST00000562173 CASZ1Q86V15 1759 aa8.23□□□□□ -1.09
UBR1-203ENST00000562173 PNMA6FA0A0J9YX94 578 aa8.23□□□□□ -1.09
UBR1-203ENST00000562173 TRIM37O94972 964 aa8.23□□□□□ -1.09
UBR1-203ENST00000562173 CPB1P15086 417 aa8.23□□□□□ -1.09
UBR1-203ENST00000562173 COL8A1P27658 744 aa8.23□□□□□ -1.09
UBR1-203ENST00000562173 MLLT1Q03111 559 aaPredicted RBP8.23□□□□□ -1.09
UBR1-203ENST00000562173 VPS72Q15906 364 aa8.23□□□□□ -1.09
UBR1-203ENST00000562173 PLA2G4EQ3MJ16 856 aa8.23□□□□□ -1.09
UBR1-203ENST00000562173 PERM1Q5SV97 790 aa8.23□□□□□ -1.09
UBR1-203ENST00000562173 PSAPL1Q6NUJ1 521 aa8.23□□□□□ -1.09
UBR1-203ENST00000562173 ELMSAN1Q6PJG2 1045 aa8.23□□□□□ -1.09
UBR1-203ENST00000562173 C20orf204Q6ZNR8 217 aa8.23□□□□□ -1.09
UBR1-203ENST00000562173 CEP120Q8N960 986 aa8.23□□□□□ -1.09
UBR1-203ENST00000562173 PMFBP1Q8TBY8 1022 aa8.23□□□□□ -1.09
UBR1-203ENST00000562173 RRAGCQ9HB90 399 aa8.23□□□□□ -1.09
UBR1-203ENST00000562173 NPHP3Q7Z494 1330 aa8.23□□□□□ -1.09
UBR1-203ENST00000562173 TNS3Q68CZ2 1445 aa8.22□□□□□ -1.09
UBR1-203ENST00000562173 SMNDC1O75940 238 aaKnown RBP eCLIP8.22□□□□□ -1.09
UBR1-203ENST00000562173 ALBP02768 609 aa8.22□□□□□ -1.09
UBR1-203ENST00000562173 EAPPQ56P03 285 aaPredicted RBP8.22□□□□□ -1.09
UBR1-203ENST00000562173 COL13A1Q5TAT6 717 aaPredicted RBP8.22□□□□□ -1.09
UBR1-203ENST00000562173 PLD4Q96BZ4 506 aa8.22□□□□□ -1.09
UBR1-203ENST00000562173 PHRF1Q9P1Y6 1649 aaKnown RBP8.21□□□□□ -1.09
UBR1-203ENST00000562173 COL14A1Q05707 1796 aaKnown RBP8.21□□□□□ -1.1
UBR1-203ENST00000562173 M0R082 166 aa8.21□□□□□ -1.1
UBR1-203ENST00000562173 LILRB5O75023 590 aa8.21□□□□□ -1.1
UBR1-203ENST00000562173 PRPF40AO75400 957 aaKnown RBP8.21□□□□□ -1.1
UBR1-203ENST00000562173 RGS9O75916 674 aaPredicted RBP8.21□□□□□ -1.1
UBR1-203ENST00000562173 IGHA1P01876 353 aa8.21□□□□□ -1.1
UBR1-203ENST00000562173 MAPK8P45983 427 aa8.21□□□□□ -1.1
UBR1-203ENST00000562173 CHRNA2Q15822 529 aa8.21□□□□□ -1.1
UBR1-203ENST00000562173 MICALL1Q8N3F8 863 aa8.21□□□□□ -1.1
UBR1-203ENST00000562173 ZNF417Q8TAU3 575 aa8.21□□□□□ -1.1
UBR1-203ENST00000562173 CCDC74AQ96AQ1 378 aa8.21□□□□□ -1.1
UBR1-203ENST00000562173 CAMKK2Q96RR4 588 aa8.21□□□□□ -1.1
UBR1-203ENST00000562173 ZNF587Q96SQ5 575 aaPredicted RBP8.21□□□□□ -1.1
UBR1-203ENST00000562173 SUV39H2Q9H5I1 410 aa8.21□□□□□ -1.1
UBR1-203ENST00000562173 BTG4Q9NY30 223 aa8.21□□□□□ -1.1
UBR1-203ENST00000562173 TECPR2O15040 1411 aa8.2□□□□□ -1.1
UBR1-203ENST00000562173 UTRNP46939 3433 aa8.2□□□□□ -1.1
UBR1-203ENST00000562173 BAG6P46379 1132 aa8.2□□□□□ -1.1
UBR1-203ENST00000562173 KIAA0319Q5VV43 1072 aa8.2□□□□□ -1.1
UBR1-203ENST00000562173 FBXO33Q7Z6M2 555 aa8.2□□□□□ -1.1
UBR1-203ENST00000562173 FRMD6Q96NE9 622 aa8.2□□□□□ -1.1
UBR1-203ENST00000562173 PBX4Q9BYU1 374 aa8.2□□□□□ -1.1
UBR1-203ENST00000562173 BHLHE41Q9C0J9 482 aaPredicted RBP8.2□□□□□ -1.1
UBR1-203ENST00000562173 SMG9Q9H0W8 520 aaKnown RBP8.2□□□□□ -1.1
UBR1-203ENST00000562173 JPH1Q9HDC5 661 aaPredicted RBP8.2□□□□□ -1.1
UBR1-203ENST00000562173 DZANK1Q9NVP4 752 aa8.2□□□□□ -1.1
UBR1-203ENST00000562173 HFM1A2PYH4 1435 aa8.2□□□□□ -1.1
UBR1-203ENST00000562173 PRAG1Q86YV5 1406 aa8.2□□□□□ -1.1
UBR1-203ENST00000562173 CHD4Q14839 1912 aa8.19□□□□□ -1.1
UBR1-203ENST00000562173 KRBA1A5PL33 1030 aa8.19□□□□□ -1.1
UBR1-203ENST00000562173 LDHBP07195 334 aaKnown RBP8.19□□□□□ -1.1
UBR1-203ENST00000562173 SUZ12Q15022 739 aaKnown RBP8.19□□□□□ -1.1
UBR1-203ENST00000562173 RGL3Q3MIN7 710 aa8.19□□□□□ -1.1
UBR1-203ENST00000562173 PEAR1Q5VY43 1037 aaPredicted RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms