RNA–Protein interactions for RNA: ENST00000561992.5

TCF4-211, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-211ENST00000561992 UBE3BQ7Z3V4 1068 aa11.31□□□□□ -0.6
TCF4-211ENST00000561992 ZNF579Q8NAF0 562 aaKnown RBP11.31□□□□□ -0.6
TCF4-211ENST00000561992 CCDC191Q8NCU4 936 aa11.31□□□□□ -0.6
TCF4-211ENST00000561992 WASF1Q92558 559 aa11.31□□□□□ -0.6
TCF4-211ENST00000561992 LRRC59Q96AG4 307 aaKnown RBP11.31□□□□□ -0.6
TCF4-211ENST00000561992 WDR24Q96S15 920 aa11.31□□□□□ -0.6
TCF4-211ENST00000561992 KCNH3Q9ULD8 1083 aa11.31□□□□□ -0.6
TCF4-211ENST00000561992 MST1RQ04912 1400 aa11.31□□□□□ -0.6
TCF4-211ENST00000561992 AFDNP55196 1824 aaKnown RBP11.31□□□□□ -0.6
TCF4-211ENST00000561992 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.31□□□□□ -0.6
TCF4-211ENST00000561992 EYA2O00167 538 aa11.31□□□□□ -0.6
TCF4-211ENST00000561992 ST5P78524 1137 aa11.31□□□□□ -0.6
TCF4-211ENST00000561992 FOXO4P98177 505 aa11.31□□□□□ -0.6
TCF4-211ENST00000561992 TRIM29Q14134 588 aa11.31□□□□□ -0.6
TCF4-211ENST00000561992 SRLQ86TD4 932 aa11.31□□□□□ -0.6
TCF4-211ENST00000561992 METTL16Q86W50 562 aaKnown RBP11.31□□□□□ -0.6
TCF4-211ENST00000561992 VPS37DQ86XT2 251 aa11.31□□□□□ -0.6
TCF4-211ENST00000561992 KRI1Q8N9T8 703 aaKnown RBP11.31□□□□□ -0.6
TCF4-211ENST00000561992 APPBP2Q92624 585 aa11.31□□□□□ -0.6
TCF4-211ENST00000561992 ALG1Q9BT22 464 aa11.31□□□□□ -0.6
TCF4-211ENST00000561992 MED4Q9NPJ6 270 aa11.31□□□□□ -0.6
TCF4-211ENST00000561992 INTS13Q9NVM9 706 aa11.31□□□□□ -0.6
TCF4-211ENST00000561992 RAI14Q9P0K7 980 aa11.31□□□□□ -0.6
TCF4-211ENST00000561992 AKR1B15C9JRZ8 316 aaPredicted RBP11.3□□□□□ -0.6
TCF4-211ENST00000561992 M0R2C6 588 aa11.3□□□□□ -0.6
TCF4-211ENST00000561992 KCNA6P17658 529 aa11.3□□□□□ -0.6
TCF4-211ENST00000561992 FECHP22830 423 aa11.3□□□□□ -0.6
TCF4-211ENST00000561992 MCM3P25205 808 aa11.3□□□□□ -0.6
TCF4-211ENST00000561992 SARSP49591 514 aaKnown RBP11.3□□□□□ -0.6
TCF4-211ENST00000561992 PIP4K2BP78356 416 aa11.3□□□□□ -0.6
TCF4-211ENST00000561992 MDM2Q00987 491 aaPredicted RBP11.3□□□□□ -0.6
TCF4-211ENST00000561992 TRDNQ13061 729 aa11.3□□□□□ -0.6
TCF4-211ENST00000561992 WHAMMP3Q1A5X7 153 aa11.3□□□□□ -0.6
TCF4-211ENST00000561992 LMBR1LQ6UX01 489 aa11.3□□□□□ -0.6
TCF4-211ENST00000561992 DHX58Q96C10 678 aa11.3□□□□□ -0.6
TCF4-211ENST00000561992 SYTL4Q96C24 671 aaPredicted RBP11.3□□□□□ -0.6
TCF4-211ENST00000561992 TMEM87BQ96K49 555 aa11.3□□□□□ -0.6
TCF4-211ENST00000561992 CTAGE1Q96RT6 745 aa11.3□□□□□ -0.6
TCF4-211ENST00000561992 TRAIPQ9BWF2 469 aa11.3□□□□□ -0.6
TCF4-211ENST00000561992 ANGEL1Q9UNK9 670 aaKnown RBP11.3□□□□□ -0.6
TCF4-211ENST00000561992 TTF2Q9UNY4 1162 aaKnown RBP11.3□□□□□ -0.6
TCF4-211ENST00000561992 IQSEC3Q9UPP2 1182 aaPredicted RBP11.3□□□□□ -0.6
TCF4-211ENST00000561992 AKAP2Q9Y2D5 859 aa11.3□□□□□ -0.6
TCF4-211ENST00000561992 PCDHA5Q9Y5H7 936 aa11.3□□□□□ -0.6
TCF4-211ENST00000561992 LAMB4A4D0S4 1761 aa11.3□□□□□ -0.6
TCF4-211ENST00000561992 A0A1B0GTH6 734 aa11.3□□□□□ -0.6
TCF4-211ENST00000561992 TMEM232C9JQI7 657 aa11.3□□□□□ -0.6
TCF4-211ENST00000561992 MYO1CO00159 1063 aa11.3□□□□□ -0.6
TCF4-211ENST00000561992 ZNF213O14771 459 aa11.3□□□□□ -0.6
TCF4-211ENST00000561992 MYL6BP14649 208 aa11.3□□□□□ -0.6
TCF4-211ENST00000561992 PNOCQ13519 176 aa11.3□□□□□ -0.6
TCF4-211ENST00000561992 MORC3Q14149 939 aa11.3□□□□□ -0.6
TCF4-211ENST00000561992 NR1I3Q14994 352 aa11.3□□□□□ -0.6
TCF4-211ENST00000561992 BEND6Q5SZJ8 279 aaPredicted RBP11.3□□□□□ -0.6
TCF4-211ENST00000561992 KRT40Q6A162 431 aa11.3□□□□□ -0.6
TCF4-211ENST00000561992 OTUD7BQ6GQQ9 843 aa11.3□□□□□ -0.6
TCF4-211ENST00000561992 FAM71BQ8TC56 605 aa11.3□□□□□ -0.6
TCF4-211ENST00000561992 CCDC12Q8WUD4 166 aaPredicted RBP11.3□□□□□ -0.6
TCF4-211ENST00000561992 NEUROD6Q96NK8 337 aa11.3□□□□□ -0.6
TCF4-211ENST00000561992 TRIM34Q9BYJ4 488 aa11.3□□□□□ -0.6
TCF4-211ENST00000561992 VIPAS39Q9H9C1 493 aa11.3□□□□□ -0.6
TCF4-211ENST00000561992 NID2Q14112 1375 aa11.3□□□□□ -0.6
TCF4-211ENST00000561992 GCP02774 474 aa11.29□□□□□ -0.6
TCF4-211ENST00000561992 TNNT3P45378 269 aaPredicted RBP11.29□□□□□ -0.6
TCF4-211ENST00000561992 PLCD1P51178 756 aa11.29□□□□□ -0.6
TCF4-211ENST00000561992 POSTNQ15063 836 aa11.29□□□□□ -0.6
TCF4-211ENST00000561992 TTC39AQ5SRH9 613 aa11.29□□□□□ -0.6
TCF4-211ENST00000561992 OSBP2Q969R2 916 aa11.29□□□□□ -0.6
TCF4-211ENST00000561992 NDUFB9Q9Y6M9 179 aa11.29□□□□□ -0.6
TCF4-211ENST00000561992 ITIH6Q6UXX5 1313 aa11.29□□□□□ -0.6
TCF4-211ENST00000561992 KDM6AO15550 1401 aaPredicted RBP11.29□□□□□ -0.6
TCF4-211ENST00000561992 ATRNO75882 1429 aa11.29□□□□□ -0.6
TCF4-211ENST00000561992 FGAP02671 866 aa11.28□□□□□ -0.6
TCF4-211ENST00000561992 MARCKSP29966 332 aaPredicted RBP11.28□□□□□ -0.6
TCF4-211ENST00000561992 LMAN1P49257 510 aa11.28□□□□□ -0.6
TCF4-211ENST00000561992 METAP2P50579 478 aaKnown RBP eCLIP11.28□□□□□ -0.6
TCF4-211ENST00000561992 ANTXR2P58335 489 aa11.28□□□□□ -0.6
TCF4-211ENST00000561992 TOGARAM2Q6ZUX3 1019 aa11.28□□□□□ -0.6
TCF4-211ENST00000561992 RASGRP2Q7LDG7 609 aa11.28□□□□□ -0.6
TCF4-211ENST00000561992 PDILTQ8N807 584 aa11.28□□□□□ -0.6
TCF4-211ENST00000561992 MAN1B1Q9UKM7 699 aa11.28□□□□□ -0.6
TCF4-211ENST00000561992 L1RE1Q9UN81 338 aa11.28□□□□□ -0.6
TCF4-211ENST00000561992 CEP131Q9UPN4 1083 aa11.28□□□□□ -0.6
TCF4-211ENST00000561992 TBC1D2BQ9UPU7 963 aa11.28□□□□□ -0.6
TCF4-211ENST00000561992 NFE2L3Q9Y4A8 694 aa11.28□□□□□ -0.6
TCF4-211ENST00000561992 ADGRG1Q9Y653 693 aa11.28□□□□□ -0.6
TCF4-211ENST00000561992 NWD2Q9ULI1 1742 aa11.28□□□□□ -0.6
TCF4-211ENST00000561992 CHGBP05060 677 aa11.28□□□□□ -0.6
TCF4-211ENST00000561992 LONRF3Q496Y0 759 aa11.28□□□□□ -0.6
TCF4-211ENST00000561992 HSP90B2PQ58FF3 399 aa11.28□□□□□ -0.6
TCF4-211ENST00000561992 CHST3Q7LGC8 479 aa11.28□□□□□ -0.6
TCF4-211ENST00000561992 PPFIBP1Q86W92 1011 aa11.28□□□□□ -0.6
TCF4-211ENST00000561992 CNGA4Q8IV77 575 aa11.28□□□□□ -0.6
TCF4-211ENST00000561992 TTC5Q8N0Z6 440 aa11.28□□□□□ -0.6
TCF4-211ENST00000561992 CTCFLQ8NI51 663 aaPredicted RBP11.28□□□□□ -0.6
TCF4-211ENST00000561992 SPATA20Q8TB22 786 aa11.28□□□□□ -0.6
TCF4-211ENST00000561992 KCNV2Q8TDN2 545 aa11.28□□□□□ -0.6
TCF4-211ENST00000561992 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.28□□□□□ -0.6
TCF4-211ENST00000561992 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.28□□□□□ -0.62e-6■■■■■ 33.9
TCF4-211ENST00000561992 FAM107BQ9H098 131 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms