RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 STK36Q9NRP7 1315 aa11.43□□□□□ -0.58
SMG1-205ENST00000561947 IRS2Q9Y4H2 1338 aa11.43□□□□□ -0.58
SMG1-205ENST00000561947 DUOX1Q9NRD9 1551 aa11.43□□□□□ -0.58
SMG1-205ENST00000561947 LAMB1P07942 1786 aa11.43□□□□□ -0.58
SMG1-205ENST00000561947 WTAPQ15007 396 aa11.43□□□□□ -0.58
SMG1-205ENST00000561947 SYNE3Q6ZMZ3 975 aa11.43□□□□□ -0.58
SMG1-205ENST00000561947 CKAP2LQ8IYA6 745 aa11.43□□□□□ -0.58
SMG1-205ENST00000561947 CNBD1Q8NA66 436 aa11.43□□□□□ -0.58
SMG1-205ENST00000561947 MYL10Q9BUA6 226 aa11.43□□□□□ -0.58
SMG1-205ENST00000561947 GJB4Q9NTQ9 266 aa11.43□□□□□ -0.58
SMG1-205ENST00000561947 CCDC39Q9UFE4 941 aa11.43□□□□□ -0.58
SMG1-205ENST00000561947 MYH2Q9UKX2 1941 aa11.43□□□□□ -0.58
SMG1-205ENST00000561947 MRVI1Q9Y6F6 885 aa11.43□□□□□ -0.58
SMG1-205ENST00000561947 ERICH2A1L162 156 aa11.42□□□□□ -0.58
SMG1-205ENST00000561947 MINDY4BA8MYZ0 360 aa11.42□□□□□ -0.58
SMG1-205ENST00000561947 KIF28PB7ZC32 967 aa11.42□□□□□ -0.58
SMG1-205ENST00000561947 RANBP6O60518 1105 aaKnown RBP11.42□□□□□ -0.58
SMG1-205ENST00000561947 IARSP41252 1262 aaKnown RBP11.42□□□□□ -0.58
SMG1-205ENST00000561947 GRAPQ13588 217 aa11.42□□□□□ -0.58
SMG1-205ENST00000561947 MYSM1Q5VVJ2 828 aa11.42□□□□□ -0.58
SMG1-205ENST00000561947 GRAPLQ8TC17 118 aaPredicted RBP11.42□□□□□ -0.58
SMG1-205ENST00000561947 PHKBQ93100 1093 aa11.42□□□□□ -0.58
SMG1-205ENST00000561947 AIFM3Q96NN9 605 aa11.42□□□□□ -0.58
SMG1-205ENST00000561947 POLR3EQ9NVU0 708 aa11.42□□□□□ -0.58
SMG1-205ENST00000561947 USP25Q9UHP3 1055 aa11.42□□□□□ -0.58
SMG1-205ENST00000561947 DLEC1Q9Y238 1755 aa11.42□□□□□ -0.58
SMG1-205ENST00000561947 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.42□□□□□ -0.58
SMG1-205ENST00000561947 YEATS4O95619 227 aa11.42□□□□□ -0.58
SMG1-205ENST00000561947 POLR3DP05423 398 aaPredicted RBP11.42□□□□□ -0.58
SMG1-205ENST00000561947 ME1P48163 572 aa11.42□□□□□ -0.58
SMG1-205ENST00000561947 MECOMQ03112 1051 aa11.42□□□□□ -0.58
SMG1-205ENST00000561947 CCDC73Q6ZRK6 1079 aa11.42□□□□□ -0.58
SMG1-205ENST00000561947 STK11IPQ8N1F8 1099 aa11.42□□□□□ -0.58
SMG1-205ENST00000561947 TMTC2Q8N394 836 aa11.42□□□□□ -0.58
SMG1-205ENST00000561947 LINC00301Q8NCQ3 95 aa11.42□□□□□ -0.58
SMG1-205ENST00000561947 ZKSCAN3Q9BRR0 538 aa11.42□□□□□ -0.58
SMG1-205ENST00000561947 GOLPH3LQ9H4A5 285 aa11.42□□□□□ -0.58
SMG1-205ENST00000561947 BRWD3Q6RI45 1802 aa11.41□□□□□ -0.58
SMG1-205ENST00000561947 RCAN1P53805 252 aa11.41□□□□□ -0.58
SMG1-205ENST00000561947 CHAF1AQ13111 956 aaPredicted RBP11.41□□□□□ -0.58
SMG1-205ENST00000561947 KRT40Q6A162 431 aa11.41□□□□□ -0.58
SMG1-205ENST00000561947 TMED8Q6PL24 325 aaPredicted RBP11.41□□□□□ -0.58
SMG1-205ENST00000561947 FAM200AQ8TCP9 573 aa11.41□□□□□ -0.58
SMG1-205ENST00000561947 ESR2Q92731 530 aa11.41□□□□□ -0.58
SMG1-205ENST00000561947 NOL7Q9UMY1 257 aaKnown RBP11.41□□□□□ -0.58
SMG1-205ENST00000561947 CLIC4Q9Y696 253 aa11.41□□□□□ -0.58
SMG1-205ENST00000561947 FMNL1O95466 1100 aaPredicted RBP11.41□□□□□ -0.58
SMG1-205ENST00000561947 IFNAR1P17181 557 aa11.41□□□□□ -0.58
SMG1-205ENST00000561947 SSRP1Q08945 709 aaKnown RBP11.41□□□□□ -0.58
SMG1-205ENST00000561947 STK38Q15208 465 aa11.41□□□□□ -0.58
SMG1-205ENST00000561947 TXNRD3Q86VQ6 643 aa11.41□□□□□ -0.58
SMG1-205ENST00000561947 KCNG4Q8TDN1 519 aa11.41□□□□□ -0.58
SMG1-205ENST00000561947 PCDHA7Q9UN72 937 aa11.41□□□□□ -0.58
SMG1-205ENST00000561947 CTAGE5O15320 804 aa11.4□□□□□ -0.58
SMG1-205ENST00000561947 ADCY5O95622 1261 aa11.4□□□□□ -0.58
SMG1-205ENST00000561947 PCP11498 1178 aaKnown RBP11.4□□□□□ -0.58
SMG1-205ENST00000561947 MSNP26038 577 aaKnown RBP11.4□□□□□ -0.58
SMG1-205ENST00000561947 FAM160A1Q05DH4 1040 aa11.4□□□□□ -0.58
SMG1-205ENST00000561947 RTN1Q16799 776 aa11.4□□□□□ -0.58
SMG1-205ENST00000561947 ADALQ6DHV7 355 aa11.4□□□□□ -0.58
SMG1-205ENST00000561947 PRR5LQ6MZQ0 368 aa11.4□□□□□ -0.58
SMG1-205ENST00000561947 FSIP1Q8NA03 581 aa11.4□□□□□ -0.58
SMG1-205ENST00000561947 ENGASEQ8NFI3 743 aa11.4□□□□□ -0.58
SMG1-205ENST00000561947 UBAC1Q9BSL1 405 aa11.4□□□□□ -0.58
SMG1-205ENST00000561947 SLC26A6Q9BXS9 759 aa11.4□□□□□ -0.58
SMG1-205ENST00000561947 LEMD3Q9Y2U8 911 aa11.4□□□□□ -0.58
SMG1-205ENST00000561947 MYH6P13533 1939 aa11.4□□□□□ -0.58
SMG1-205ENST00000561947 A0A1W2PQ27 194 aa11.4□□□□□ -0.59
SMG1-205ENST00000561947 A0A1W2PQ64 194 aa11.4□□□□□ -0.59
SMG1-205ENST00000561947 A0A1W2PQD8 194 aa11.4□□□□□ -0.59
SMG1-205ENST00000561947 PRDX5P30044 214 aa11.4□□□□□ -0.59
SMG1-205ENST00000561947 SNW1Q13573 536 aaKnown RBP11.4□□□□□ -0.59
SMG1-205ENST00000561947 SEC23AQ15436 765 aa11.4□□□□□ -0.59
SMG1-205ENST00000561947 SLC27A3Q5K4L6 730 aa11.4□□□□□ -0.59
SMG1-205ENST00000561947 ANO1Q5XXA6 986 aa11.4□□□□□ -0.59
SMG1-205ENST00000561947 SASS6Q6UVJ0 657 aa11.4□□□□□ -0.59
SMG1-205ENST00000561947 WASF1Q92558 559 aa11.4□□□□□ -0.59
SMG1-205ENST00000561947 ANKIB1Q9P2G1 1089 aa11.4□□□□□ -0.59
SMG1-205ENST00000561947 SMIM22K7EJ46 135 aa11.39□□□□□ -0.59
SMG1-205ENST00000561947 FGRP09769 529 aa11.39□□□□□ -0.59
SMG1-205ENST00000561947 GYS1P13807 737 aa11.39□□□□□ -0.59
SMG1-205ENST00000561947 TRIM29Q14134 588 aa11.39□□□□□ -0.59
SMG1-205ENST00000561947 SF3A1Q15459 793 aaKnown RBP11.39□□□□□ -0.59
SMG1-205ENST00000561947 ANO6Q4KMQ2 910 aa11.39□□□□□ -0.59
SMG1-205ENST00000561947 CTR9Q6PD62 1173 aa11.39□□□□□ -0.59
SMG1-205ENST00000561947 ZNF654Q8IZM8 581 aa11.39□□□□□ -0.59
SMG1-205ENST00000561947 MRPS27Q92552 414 aaKnown RBP11.39□□□□□ -0.59
SMG1-205ENST00000561947 CRNKL1Q9BZJ0 848 aaKnown RBP11.39□□□□□ -0.59
SMG1-205ENST00000561947 QTRT2Q9H974 415 aaKnown RBP11.39□□□□□ -0.59
SMG1-205ENST00000561947 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.39□□□□□ -0.59
SMG1-205ENST00000561947 TNKSO95271 1327 aa11.39□□□□□ -0.59
SMG1-205ENST00000561947 XDHP47989 1333 aa11.39□□□□□ -0.59
SMG1-205ENST00000561947 CYP2D7A0A087X1C5 515 aa11.39□□□□□ -0.59
SMG1-205ENST00000561947 SPTLC2O15270 562 aa11.39□□□□□ -0.59
SMG1-205ENST00000561947 KINO60870 393 aaKnown RBP11.39□□□□□ -0.59
SMG1-205ENST00000561947 PTMAP06454 111 aaKnown RBP11.39□□□□□ -0.59
SMG1-205ENST00000561947 SPTY2D1Q68D10 685 aaPredicted RBP11.39□□□□□ -0.59
SMG1-205ENST00000561947 AATFQ9NY61 560 aaKnown RBP eCLIP11.39□□□□□ -0.59
SMG1-205ENST00000561947 ZKSCAN5Q9Y2L8 839 aa11.39□□□□□ -0.59
SMG1-205ENST00000561947 CCDC196A0A1B0GTZ2 297 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms