RNA–Protein interactions for RNA: ENST00000561749.1

SMPD3-202, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-202ENST00000561749 ZSCAN29Q8IWY8 852 aaPredicted RBP28.32■■■□□ 2.12
SMPD3-202ENST00000561749 HHIPL1Q96JK4 782 aa28.32■■■□□ 2.12
SMPD3-202ENST00000561749 WDR33Q9C0J8 1336 aaKnown RBP28.32■■■□□ 2.12
SMPD3-202ENST00000561749 USP2O75604 605 aaPredicted RBP28.31■■■□□ 2.12
SMPD3-202ENST00000561749 ZNF157P51786 506 aaPredicted RBP28.31■■■□□ 2.12
SMPD3-202ENST00000561749 SH3BP5LQ7L8J4 393 aa28.31■■■□□ 2.12
SMPD3-202ENST00000561749 TGFBRAP1Q8WUH2 860 aa28.31■■■□□ 2.12
SMPD3-202ENST00000561749 MAGEB6P1A0A0J9YX57 407 aa28.3■■■□□ 2.12
SMPD3-202ENST00000561749 ECE1P42892 770 aa28.3■■■□□ 2.12
SMPD3-202ENST00000561749 MIGA2Q7L4E1 593 aa28.3■■■□□ 2.12
SMPD3-202ENST00000561749 MAPKAPK5Q8IW41 473 aa28.3■■■□□ 2.12
SMPD3-202ENST00000561749 KBTBD3Q8NAB2 608 aa28.3■■■□□ 2.12
SMPD3-202ENST00000561749 DDTLA6NHG4 134 aaPredicted RBP28.29■■■□□ 2.12
SMPD3-202ENST00000561749 TMED8Q6PL24 325 aaPredicted RBP28.29■■■□□ 2.12
SMPD3-202ENST00000561749 PLEKHM2Q8IWE5 1019 aa28.29■■■□□ 2.12
SMPD3-202ENST00000561749 NAV1Q8NEY1 1877 aa28.29■■■□□ 2.12
SMPD3-202ENST00000561749 AOC2O75106 756 aa28.28■■■□□ 2.12
SMPD3-202ENST00000561749 IREB2P48200 963 aaKnown RBP28.28■■■□□ 2.12
SMPD3-202ENST00000561749 MAP3K11Q16584 847 aa28.28■■■□□ 2.12
SMPD3-202ENST00000561749 CLMNQ96JQ2 1002 aa28.28■■■□□ 2.12
SMPD3-202ENST00000561749 CSRNP1Q96S65 589 aa28.28■■■□□ 2.12
SMPD3-202ENST00000561749 RIOK1Q9BRS2 568 aaKnown RBP28.28■■■□□ 2.12
SMPD3-202ENST00000561749 OSBPL5Q9H0X9 879 aaPredicted RBP28.28■■■□□ 2.12
SMPD3-202ENST00000561749 SIPA1L1O43166 1804 aa28.27■■■□□ 2.12
SMPD3-202ENST00000561749 SLURP2P0DP57 97 aa28.27■■■□□ 2.12
SMPD3-202ENST00000561749 LDLRAD1Q5T700 205 aa28.27■■■□□ 2.12
SMPD3-202ENST00000561749 ZSCAN25Q6NSZ9 544 aa28.27■■■□□ 2.12
SMPD3-202ENST00000561749 THSD7BQ9C0I4 1608 aa28.27■■■□□ 2.12
SMPD3-202ENST00000561749 FLT1P17948 1338 aa28.26■■■□□ 2.11
SMPD3-202ENST00000561749 NPM3O75607 178 aaKnown RBP28.26■■■□□ 2.11
SMPD3-202ENST00000561749 PDE4AP27815 886 aa28.26■■■□□ 2.11
SMPD3-202ENST00000561749 DCAF15Q66K64 600 aa28.26■■■□□ 2.11
SMPD3-202ENST00000561749 RASAL3Q86YV0 1011 aa28.26■■■□□ 2.11
SMPD3-202ENST00000561749 LCORLQ8N3X6 602 aa28.26■■■□□ 2.11
SMPD3-202ENST00000561749 HOOK2Q96ED9 719 aa28.26■■■□□ 2.11
SMPD3-202ENST00000561749 FSD1Q9BTV5 496 aa28.26■■■□□ 2.11
SMPD3-202ENST00000561749 FAM155AB1AL88 458 aaPredicted RBP28.25■■■□□ 2.11
SMPD3-202ENST00000561749 USP5P45974 858 aa28.25■■■□□ 2.11
SMPD3-202ENST00000561749 UBE3CQ15386 1083 aa28.25■■■□□ 2.11
SMPD3-202ENST00000561749 ARMT1Q9H993 441 aa28.25■■■□□ 2.11
SMPD3-202ENST00000561749 SAP30BPQ9UHR5 308 aaKnown RBP28.25■■■□□ 2.11
SMPD3-202ENST00000561749 MBD4O95243 580 aa28.24■■■□□ 2.11
SMPD3-202ENST00000561749 SLC10A3P09131 477 aa28.24■■■□□ 2.11
SMPD3-202ENST00000561749 JMYQ8N9B5 988 aa28.24■■■□□ 2.11
SMPD3-202ENST00000561749 ZIC5Q96T25 663 aa28.24■■■□□ 2.11
SMPD3-202ENST00000561749 CEP350Q5VT06 3117 aa28.24■■■□□ 2.11
SMPD3-202ENST00000561749 ATRNL1Q5VV63 1379 aa28.24■■■□□ 2.11
SMPD3-202ENST00000561749 BAZ2AQ9UIF9 1905 aaKnown RBP28.24■■■□□ 2.11
SMPD3-202ENST00000561749 COL2A1P02458 1487 aaPredicted RBP28.23■■■□□ 2.11
SMPD3-202ENST00000561749 RNF113AO15541 343 aaKnown RBP28.23■■■□□ 2.11
SMPD3-202ENST00000561749 MKRN3Q13064 507 aaKnown RBP28.23■■■□□ 2.11
SMPD3-202ENST00000561749 SLC4A8Q2Y0W8 1093 aa28.23■■■□□ 2.11
SMPD3-202ENST00000561749 CERS3Q8IU89 383 aa28.23■■■□□ 2.11
SMPD3-202ENST00000561749 CCDC102AQ96A19 550 aa28.23■■■□□ 2.11
SMPD3-202ENST00000561749 WRNIP1Q96S55 665 aa28.23■■■□□ 2.11
SMPD3-202ENST00000561749 ZNF341Q9BYN7 854 aa28.23■■■□□ 2.11
SMPD3-202ENST00000561749 DDX60LQ5H9U9 1706 aaKnown RBP28.22■■■□□ 2.11
SMPD3-202ENST00000561749 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.22■■■□□ 2.11
SMPD3-202ENST00000561749 ANKRD13AQ8IZ07 590 aa28.22■■■□□ 2.11
SMPD3-202ENST00000561749 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.22■■■□□ 2.11
SMPD3-202ENST00000561749 SLC10A4Q96EP9 437 aa28.22■■■□□ 2.11
SMPD3-202ENST00000561749 CRNKL1Q9BZJ0 848 aaKnown RBP28.22■■■□□ 2.11
SMPD3-202ENST00000561749 PUS7LQ9H0K6 701 aaKnown RBP28.22■■■□□ 2.11
SMPD3-202ENST00000561749 FAM196BA6NMK8 535 aa28.21■■■□□ 2.11
SMPD3-202ENST00000561749 MAP3K9P80192 1104 aa28.21■■■□□ 2.11
SMPD3-202ENST00000561749 ELP3Q9H9T3 547 aa28.21■■■□□ 2.11
SMPD3-202ENST00000561749 PALD1Q9ULE6 856 aa28.21■■■□□ 2.11
SMPD3-202ENST00000561749 TRIM6-TRIM34B2RNG4 842 aa28.2■■■□□ 2.1
SMPD3-202ENST00000561749 INPP5BP32019 993 aa28.2■■■□□ 2.1
SMPD3-202ENST00000561749 VGLL4Q14135 290 aa28.2■■■□□ 2.1
SMPD3-202ENST00000561749 SDR42E1Q8WUS8 393 aa28.2■■■□□ 2.1
SMPD3-202ENST00000561749 ZKSCAN4Q969J2 545 aaPredicted RBP28.2■■■□□ 2.1
SMPD3-202ENST00000561749 AIDAQ96BJ3 306 aa28.2■■■□□ 2.1
SMPD3-202ENST00000561749 EVI5LQ96CN4 794 aa28.2■■■□□ 2.1
SMPD3-202ENST00000561749 OSBPL3Q9H4L5 887 aa28.2■■■□□ 2.1
SMPD3-202ENST00000561749 PRKAB2O43741 272 aa28.19■■■□□ 2.1
SMPD3-202ENST00000561749 ZFYP08048 801 aaPredicted RBP28.19■■■□□ 2.1
SMPD3-202ENST00000561749 NOGQ13253 232 aa28.19■■■□□ 2.1
SMPD3-202ENST00000561749 APPBP2Q92624 585 aa28.19■■■□□ 2.1
SMPD3-202ENST00000561749 OSBP2Q969R2 916 aa28.19■■■□□ 2.1
SMPD3-202ENST00000561749 CSADQ9Y600 493 aa28.19■■■□□ 2.1
SMPD3-202ENST00000561749 ATAD5Q96QE3 1844 aa28.18■■■□□ 2.1
SMPD3-202ENST00000561749 RILPL2Q969X0 211 aa28.18■■■□□ 2.1
SMPD3-202ENST00000561749 CCDC136Q96JN2 1154 aa28.18■■■□□ 2.1
SMPD3-202ENST00000561749 DOCK1Q14185 1865 aa28.17■■■□□ 2.1
SMPD3-202ENST00000561749 M0R2C6 588 aa28.17■■■□□ 2.1
SMPD3-202ENST00000561749 KIF23Q02241 960 aaPredicted RBP28.17■■■□□ 2.1
SMPD3-202ENST00000561749 LRRFIP1Q32MZ4 808 aaKnown RBP28.17■■■□□ 2.1
SMPD3-202ENST00000561749 CENPQQ7L2Z9 268 aaPredicted RBP28.17■■■□□ 2.1
SMPD3-202ENST00000561749 CNKSR2Q8WXI2 1034 aa28.17■■■□□ 2.1
SMPD3-202ENST00000561749 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.17■■■□□ 2.1
SMPD3-202ENST00000561749 MAP2K2P36507 400 aa28.16■■■□□ 2.1
SMPD3-202ENST00000561749 SPRYD7Q5W111 196 aa28.16■■■□□ 2.1
SMPD3-202ENST00000561749 WNK4Q96J92 1243 aa28.16■■■□□ 2.1
SMPD3-202ENST00000561749 SEC62Q99442 399 aaKnown RBP28.16■■■□□ 2.1
SMPD3-202ENST00000561749 DHX36Q9H2U1 1008 aaKnown RBP28.16■■■□□ 2.1
SMPD3-202ENST00000561749 ZNF112Q9UJU3 913 aa28.16■■■□□ 2.1
SMPD3-202ENST00000561749 SNCAIPQ9Y6H5 919 aa28.16■■■□□ 2.1
SMPD3-202ENST00000561749 UNCXA6NJT0 531 aa28.15■■■□□ 2.1
SMPD3-202ENST00000561749 PI4KBQ9UBF8 816 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms