RNA–Protein interactions for RNA: ENST00000561734.5

RPUSD1-202, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-202ENST00000561734 LIFRP42702 1097 aa23.41■■□□□ 1.34
RPUSD1-202ENST00000561734 NAA30Q147X3 362 aaPredicted RBP23.41■■□□□ 1.34
RPUSD1-202ENST00000561734 TUBE1Q9UJT0 475 aa23.41■■□□□ 1.34
RPUSD1-202ENST00000561734 SLC12A7Q9Y666 1083 aa23.41■■□□□ 1.34
RPUSD1-202ENST00000561734 RESP18Q5W5W9 173 aa23.4■■□□□ 1.34
RPUSD1-202ENST00000561734 ARMCX5Q6P1M9 558 aa23.4■■□□□ 1.34
RPUSD1-202ENST00000561734 KCND1Q9NSA2 647 aa23.4■■□□□ 1.34
RPUSD1-202ENST00000561734 NHSL1Q5SYE7 1610 aa23.4■■□□□ 1.34
RPUSD1-202ENST00000561734 LMOD1P29536 600 aaPredicted RBP23.4■■□□□ 1.34
RPUSD1-202ENST00000561734 PNOCQ13519 176 aa23.4■■□□□ 1.34
RPUSD1-202ENST00000561734 HSD3B7Q9H2F3 369 aa23.4■■□□□ 1.34
RPUSD1-202ENST00000561734 STK36Q9NRP7 1315 aa23.39■■□□□ 1.34
RPUSD1-202ENST00000561734 FAM237AA0A1B0GTK4 181 aa23.39■■□□□ 1.33
RPUSD1-202ENST00000561734 GSG1L2A8MUP6 293 aa23.39■■□□□ 1.33
RPUSD1-202ENST00000561734 IKBKBO14920 756 aa23.39■■□□□ 1.33
RPUSD1-202ENST00000561734 PRKAB2O43741 272 aa23.39■■□□□ 1.33
RPUSD1-202ENST00000561734 SSRP1Q08945 709 aaKnown RBP23.39■■□□□ 1.33
RPUSD1-202ENST00000561734 AKNAD1Q5T1N1 836 aa23.39■■□□□ 1.33
RPUSD1-202ENST00000561734 SUSD4Q5VX71 490 aa23.39■■□□□ 1.33
RPUSD1-202ENST00000561734 SEC31BQ9NQW1 1179 aa23.39■■□□□ 1.33
RPUSD1-202ENST00000561734 DOCK2Q92608 1830 aa23.39■■□□□ 1.33
RPUSD1-202ENST00000561734 TIAM2Q8IVF5 1701 aa23.38■■□□□ 1.33
RPUSD1-202ENST00000561734 CBX1P83916 185 aa23.38■■□□□ 1.33
RPUSD1-202ENST00000561734 SMAP1Q8IYB5 467 aaPredicted RBP23.38■■□□□ 1.33
RPUSD1-202ENST00000561734 CCDC150Q8NCX0 1101 aa23.38■■□□□ 1.33
RPUSD1-202ENST00000561734 FMNL1O95466 1100 aaPredicted RBP23.38■■□□□ 1.33
RPUSD1-202ENST00000561734 ATP1A3P13637 1013 aa23.38■■□□□ 1.33
RPUSD1-202ENST00000561734 MPHOSPH8Q99549 860 aa23.38■■□□□ 1.33
RPUSD1-202ENST00000561734 CNNM2Q9H8M5 875 aa23.38■■□□□ 1.33
RPUSD1-202ENST00000561734 STRCQ7RTU9 1775 aa23.37■■□□□ 1.33
RPUSD1-202ENST00000561734 GUCY1A2P33402 732 aa23.37■■□□□ 1.33
RPUSD1-202ENST00000561734 FANCCQ00597 558 aa23.37■■□□□ 1.33
RPUSD1-202ENST00000561734 LCORLQ8N3X6 602 aa23.37■■□□□ 1.33
RPUSD1-202ENST00000561734 AK7Q96M32 723 aa23.37■■□□□ 1.33
RPUSD1-202ENST00000561734 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.37■■□□□ 1.33
RPUSD1-202ENST00000561734 KDM4FA0A1W2PPD8 638 aa23.37■■□□□ 1.33
RPUSD1-202ENST00000561734 CUTAO60888 179 aa23.37■■□□□ 1.33
RPUSD1-202ENST00000561734 RRP12Q5JTH9 1297 aaKnown RBP23.37■■□□□ 1.33
RPUSD1-202ENST00000561734 E4F1Q66K89 784 aaPredicted RBP23.37■■□□□ 1.33
RPUSD1-202ENST00000561734 MFSD6Q6ZSS7 791 aa23.37■■□□□ 1.33
RPUSD1-202ENST00000561734 ZKSCAN3Q9BRR0 538 aa23.37■■□□□ 1.33
RPUSD1-202ENST00000561734 KRT23Q9C075 422 aa23.37■■□□□ 1.33
RPUSD1-202ENST00000561734 BCL11BQ9C0K0 894 aaPredicted RBP23.37■■□□□ 1.33
RPUSD1-202ENST00000561734 PRDM10Q9NQV6 1147 aa23.37■■□□□ 1.33
RPUSD1-202ENST00000561734 KAT6BQ8WYB5 2073 aa23.36■■□□□ 1.33
RPUSD1-202ENST00000561734 CHD4Q14839 1912 aa23.36■■□□□ 1.33
RPUSD1-202ENST00000561734 IFNAR1P17181 557 aa23.36■■□□□ 1.33
RPUSD1-202ENST00000561734 SFPQP23246 707 aaKnown RBP eCLIP23.36■■□□□ 1.33
RPUSD1-202ENST00000561734 LONRF3Q496Y0 759 aa23.36■■□□□ 1.33
RPUSD1-202ENST00000561734 METTL16Q86W50 562 aaKnown RBP23.36■■□□□ 1.33
RPUSD1-202ENST00000561734 TDO2P48775 406 aa23.35■■□□□ 1.33
RPUSD1-202ENST00000561734 BCAMP50895 628 aa23.35■■□□□ 1.33
RPUSD1-202ENST00000561734 NOSTRINQ8IVI9 506 aa23.35■■□□□ 1.33
RPUSD1-202ENST00000561734 SLC4A4Q9Y6R1 1079 aa23.35■■□□□ 1.33
RPUSD1-202ENST00000561734 NID2Q14112 1375 aa23.35■■□□□ 1.33
RPUSD1-202ENST00000561734 SPDYE4A6NLX3 237 aa23.35■■□□□ 1.33
RPUSD1-202ENST00000561734 EXOC5O00471 708 aa23.35■■□□□ 1.33
RPUSD1-202ENST00000561734 STK11IPQ8N1F8 1099 aa23.35■■□□□ 1.33
RPUSD1-202ENST00000561734 STAG1Q8WVM7 1258 aa23.35■■□□□ 1.33
RPUSD1-202ENST00000561734 TOMM22Q9NS69 142 aa23.35■■□□□ 1.33
RPUSD1-202ENST00000561734 KCNH3Q9ULD8 1083 aa23.35■■□□□ 1.33
RPUSD1-202ENST00000561734 BTBD18B2RXH4 712 aa23.34■■□□□ 1.33
RPUSD1-202ENST00000561734 MMP1P03956 469 aa23.34■■□□□ 1.33
RPUSD1-202ENST00000561734 KCNJ14Q9UNX9 436 aa23.34■■□□□ 1.33
RPUSD1-202ENST00000561734 EIF5P55010 431 aaKnown RBP23.34■■□□□ 1.33
RPUSD1-202ENST00000561734 MYL5Q02045 173 aa23.34■■□□□ 1.33
RPUSD1-202ENST00000561734 KRBA2Q6ZNG9 492 aa23.34■■□□□ 1.33
RPUSD1-202ENST00000561734 KRI1Q8N9T8 703 aaKnown RBP23.34■■□□□ 1.33
RPUSD1-202ENST00000561734 CNNM3Q8NE01 707 aa23.34■■□□□ 1.33
RPUSD1-202ENST00000561734 WASF1Q92558 559 aa23.34■■□□□ 1.33
RPUSD1-202ENST00000561734 RTN1Q16799 776 aa23.33■■□□□ 1.33
RPUSD1-202ENST00000561734 SPECC1Q5M775 1068 aa23.33■■□□□ 1.33
RPUSD1-202ENST00000561734 FOXP4Q8IVH2 680 aaPredicted RBP23.33■■□□□ 1.33
RPUSD1-202ENST00000561734 MIGA1Q8NAN2 632 aa23.33■■□□□ 1.33
RPUSD1-202ENST00000561734 DPF2Q92785 391 aa23.33■■□□□ 1.33
RPUSD1-202ENST00000561734 PPP1R13BQ96KQ4 1090 aa23.33■■□□□ 1.33
RPUSD1-202ENST00000561734 UTP14AQ9BVJ6 771 aaKnown RBP23.33■■□□□ 1.33
RPUSD1-202ENST00000561734 NACAP1Q9BZK3 213 aa23.33■■□□□ 1.33
RPUSD1-202ENST00000561734 ZNF215Q9UL58 517 aaPredicted RBP23.33■■□□□ 1.33
RPUSD1-202ENST00000561734 TOB1P50616 345 aaPredicted RBP23.33■■□□□ 1.32
RPUSD1-202ENST00000561734 WTAPQ15007 396 aa23.33■■□□□ 1.32
RPUSD1-202ENST00000561734 INTS5Q6P9B9 1019 aaKnown RBP23.33■■□□□ 1.32
RPUSD1-202ENST00000561734 DIS3L2Q8IYB7 885 aaKnown RBP23.33■■□□□ 1.32
RPUSD1-202ENST00000561734 KIF18AQ8NI77 898 aa23.33■■□□□ 1.32
RPUSD1-202ENST00000561734 PNPLA7Q6ZV29 1317 aa23.33■■□□□ 1.32
RPUSD1-202ENST00000561734 GNAT2P19087 354 aa23.32■■□□□ 1.32
RPUSD1-202ENST00000561734 CMTR1Q8N1G2 835 aaKnown RBP23.32■■□□□ 1.32
RPUSD1-202ENST00000561734 CCDC82Q8N4S0 544 aa23.32■■□□□ 1.32
RPUSD1-202ENST00000561734 FOXN1O15353 648 aa23.31■■□□□ 1.32
RPUSD1-202ENST00000561734 TRIM22Q8IYM9 498 aa23.31■■□□□ 1.32
RPUSD1-202ENST00000561734 PCDHA5Q9Y5H7 936 aa23.31■■□□□ 1.32
RPUSD1-202ENST00000561734 SERPINC1P01008 464 aa23.31■■□□□ 1.32
RPUSD1-202ENST00000561734 UBASH3AP57075 661 aa23.31■■□□□ 1.32
RPUSD1-202ENST00000561734 GRIN1Q05586 938 aa23.31■■□□□ 1.32
RPUSD1-202ENST00000561734 SART3Q15020 963 aaKnown RBP23.31■■□□□ 1.32
RPUSD1-202ENST00000561734 SAFBQ15424 915 aaKnown RBP eCLIP23.31■■□□□ 1.32
RPUSD1-202ENST00000561734 DOT1LQ8TEK3 1739 aa23.31■■□□□ 1.32
RPUSD1-202ENST00000561734 COL14A1Q05707 1796 aaKnown RBP23.3■■□□□ 1.32
RPUSD1-202ENST00000561734 BCORQ6W2J9 1755 aa23.3■■□□□ 1.32
RPUSD1-202ENST00000561734 KIF2AO00139 706 aaPredicted RBP23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms