RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 WRNIP1Q96S55 665 aa31.18■■■□□ 2.58
NME3-202ENST00000561637 SURF6O75683 361 aaKnown RBP31.17■■■□□ 2.58
NME3-202ENST00000561637 MCAMP43121 646 aa31.17■■■□□ 2.58
NME3-202ENST00000561637 DBNDD2Q9BQY9 259 aa31.17■■■□□ 2.58
NME3-202ENST00000561637 IRF6O14896 467 aa31.16■■■□□ 2.58
NME3-202ENST00000561637 ARID4AP29374 1257 aaPredicted RBP31.16■■■□□ 2.58
NME3-202ENST00000561637 OS9Q13438 667 aaPredicted RBP31.16■■■□□ 2.58
NME3-202ENST00000561637 MTFR1Q15390 333 aa31.16■■■□□ 2.58
NME3-202ENST00000561637 TNNI3KQ59H18 835 aa31.16■■■□□ 2.58
NME3-202ENST00000561637 ZGPATQ8N5A5 531 aaKnown RBP31.16■■■□□ 2.58
NME3-202ENST00000561637 SPATA5Q8NB90 893 aa31.16■■■□□ 2.58
NME3-202ENST00000561637 SHISA4Q96DD7 197 aa31.16■■■□□ 2.58
NME3-202ENST00000561637 FPGT-TNNI3KV9GXZ4 949 aa31.16■■■□□ 2.58
NME3-202ENST00000561637 RFX7Q2KHR2 1363 aa31.16■■■□□ 2.58
NME3-202ENST00000561637 SLURP2P0DP57 97 aa31.15■■■□□ 2.58
NME3-202ENST00000561637 CETPP11597 493 aa31.15■■■□□ 2.58
NME3-202ENST00000561637 CTGFP29279 349 aa31.15■■■□□ 2.58
NME3-202ENST00000561637 INPP5BP32019 993 aa31.15■■■□□ 2.58
NME3-202ENST00000561637 MECOMQ03112 1051 aa31.15■■■□□ 2.58
NME3-202ENST00000561637 KIF22Q14807 665 aa31.15■■■□□ 2.58
NME3-202ENST00000561637 CEP85Q6P2H3 762 aa31.15■■■□□ 2.58
NME3-202ENST00000561637 ERO1BQ86YB8 467 aa31.15■■■□□ 2.58
NME3-202ENST00000561637 RANBP2P49792 3224 aaKnown RBP31.15■■■□□ 2.58
NME3-202ENST00000561637 RGS3P49796 1198 aa31.14■■■□□ 2.58
NME3-202ENST00000561637 CHRDL2Q6WN34 429 aa31.14■■■□□ 2.58
NME3-202ENST00000561637 SNRKQ9NRH2 765 aa31.14■■■□□ 2.58
NME3-202ENST00000561637 TLR7Q9NYK1 1049 aaKnown RBP31.14■■■□□ 2.58
NME3-202ENST00000561637 AK9Q5TCS8 1911 aa31.14■■■□□ 2.57
NME3-202ENST00000561637 BTDP43251 543 aa31.13■■■□□ 2.57
NME3-202ENST00000561637 ERICH6Q7L0X2 663 aa31.13■■■□□ 2.57
NME3-202ENST00000561637 SH3BP5LQ7L8J4 393 aa31.13■■■□□ 2.57
NME3-202ENST00000561637 ZCCHC17Q9NP64 241 aaKnown RBP31.13■■■□□ 2.57
NME3-202ENST00000561637 DDX4Q9NQI0 724 aaKnown RBP31.13■■■□□ 2.57
NME3-202ENST00000561637 ZNF341Q9BYN7 854 aa31.12■■■□□ 2.57
NME3-202ENST00000561637 NOP58Q9Y2X3 529 aaKnown RBP31.12■■■□□ 2.57
NME3-202ENST00000561637 MROH7-TTC4A0A0A0MT08 1334 aa31.12■■■□□ 2.57
NME3-202ENST00000561637 WDHD1O75717 1129 aaPredicted RBP31.11■■■□□ 2.57
NME3-202ENST00000561637 SNAPC2Q13487 334 aa31.11■■■□□ 2.57
NME3-202ENST00000561637 SPTY2D1Q68D10 685 aaPredicted RBP31.11■■■□□ 2.57
NME3-202ENST00000561637 C17orf99Q6UX52 265 aa31.11■■■□□ 2.57
NME3-202ENST00000561637 ATRNL1Q5VV63 1379 aa31.1■■■□□ 2.57
NME3-202ENST00000561637 GNRH1P01148 92 aa31.1■■■□□ 2.57
NME3-202ENST00000561637 PPIL2Q13356 520 aa31.1■■■□□ 2.57
NME3-202ENST00000561637 DCAF15Q66K64 600 aa31.1■■■□□ 2.57
NME3-202ENST00000561637 NSUN4Q96CB9 384 aaKnown RBP31.1■■■□□ 2.57
NME3-202ENST00000561637 FAM163AQ96GL9 167 aaPredicted RBP31.1■■■□□ 2.57
NME3-202ENST00000561637 GPR108Q9NPR9 543 aa31.1■■■□□ 2.57
NME3-202ENST00000561637 RBM27Q9P2N5 1060 aaKnown RBP31.1■■■□□ 2.57
NME3-202ENST00000561637 CPA4Q9UI42 421 aa31.1■■■□□ 2.57
NME3-202ENST00000561637 RHBDL3P58872 404 aa31.09■■■□□ 2.57
NME3-202ENST00000561637 IDI2Q9BXS1 227 aa31.09■■■□□ 2.57
NME3-202ENST00000561637 DBNLQ9UJU6 430 aaKnown RBP31.09■■■□□ 2.57
NME3-202ENST00000561637 EXOC6BQ9Y2D4 811 aa31.09■■■□□ 2.57
NME3-202ENST00000561637 PRMT2P55345 433 aa31.08■■■□□ 2.57
NME3-202ENST00000561637 PICALMQ13492 652 aa31.08■■■□□ 2.57
NME3-202ENST00000561637 DPF3Q92784 378 aa31.08■■■□□ 2.57
NME3-202ENST00000561637 TRIM47Q96LD4 638 aa31.08■■■□□ 2.57
NME3-202ENST00000561637 CCDC8Q9H0W5 538 aaPredicted RBP31.08■■■□□ 2.57
NME3-202ENST00000561637 RAI14Q9P0K7 980 aa31.08■■■□□ 2.57
NME3-202ENST00000561637 COG6Q9Y2V7 657 aa31.08■■■□□ 2.57
NME3-202ENST00000561637 DDTLA6NHG4 134 aaPredicted RBP31.07■■■□□ 2.56
NME3-202ENST00000561637 UQCRFS1P1P0C7P4 283 aa31.07■■■□□ 2.56
NME3-202ENST00000561637 PSMC4P43686 418 aa31.07■■■□□ 2.56
NME3-202ENST00000561637 TTC39AQ5SRH9 613 aa31.07■■■□□ 2.56
NME3-202ENST00000561637 EAF2Q96CJ1 260 aaPredicted RBP31.07■■■□□ 2.56
NME3-202ENST00000561637 HOOK2Q96ED9 719 aa31.07■■■□□ 2.56
NME3-202ENST00000561637 SRRDQ9UH36 339 aa31.07■■■□□ 2.56
NME3-202ENST00000561637 ZNF112Q9UJU3 913 aa31.07■■■□□ 2.56
NME3-202ENST00000561637 MGAMO43451 1857 aa31.07■■■□□ 2.56
NME3-202ENST00000561637 DOCK2Q92608 1830 aa31.06■■■□□ 2.56
NME3-202ENST00000561637 GPR75-ASB3A0A0A6YYF3 556 aa31.06■■■□□ 2.56
NME3-202ENST00000561637 GOLGA6L2Q8N9W4 650 aaPredicted RBP31.06■■■□□ 2.56
NME3-202ENST00000561637 RCAN3Q9UKA8 241 aa31.06■■■□□ 2.56
NME3-202ENST00000561637 ENTPD3O75355 529 aa31.05■■■□□ 2.56
NME3-202ENST00000561637 OSBPP22059 807 aa31.05■■■□□ 2.56
NME3-202ENST00000561637 ADGRA2Q96PE1 1338 aa31.04■■■□□ 2.56
NME3-202ENST00000561637 MYO5AQ9Y4I1 1855 aaKnown RBP31.04■■■□□ 2.56
NME3-202ENST00000561637 SLF2Q8IX21 1173 aa31.04■■■□□ 2.56
NME3-202ENST00000561637 CYP2E1P05181 493 aaPredicted RBP31.03■■■□□ 2.56
NME3-202ENST00000561637 PPATQ06203 517 aa31.03■■■□□ 2.56
NME3-202ENST00000561637 C20orf194Q5TEA3 1177 aa31.03■■■□□ 2.56
NME3-202ENST00000561637 UBE2Q1Q7Z7E8 422 aa31.03■■■□□ 2.56
NME3-202ENST00000561637 PIH1D3Q9NQM4 214 aaKnown RBP31.03■■■□□ 2.56
NME3-202ENST00000561637 LRP2BPQ9P2M1 347 aa31.03■■■□□ 2.56
NME3-202ENST00000561637 NDUFB9Q9Y6M9 179 aa31.03■■■□□ 2.56
NME3-202ENST00000561637 GRK4P32298 578 aa31.02■■■□□ 2.56
NME3-202ENST00000561637 ZAP70P43403 619 aa31.02■■■□□ 2.56
NME3-202ENST00000561637 ZSCAN29Q8IWY8 852 aaPredicted RBP31.02■■■□□ 2.56
NME3-202ENST00000561637 PHF20L1A8MW92 1017 aa31.01■■■□□ 2.55
NME3-202ENST00000561637 PDHXO00330 501 aa31.01■■■□□ 2.55
NME3-202ENST00000561637 CCDC158Q5M9N0 1113 aa31.01■■■□□ 2.55
NME3-202ENST00000561637 ANKRD23Q86SG2 305 aa31.01■■■□□ 2.55
NME3-202ENST00000561637 ADGRA1Q86SQ6 560 aa31.01■■■□□ 2.55
NME3-202ENST00000561637 SIRT2Q8IXJ6 389 aa31.01■■■□□ 2.55
NME3-202ENST00000561637 RAET1EQ8TD07 263 aa31.01■■■□□ 2.55
NME3-202ENST00000561637 FRMD4AQ9P2Q2 1039 aaPredicted RBP31.01■■■□□ 2.55
NME3-202ENST00000561637 FAM196BA6NMK8 535 aa31■■■□□ 2.55
NME3-202ENST00000561637 FMNL1O95466 1100 aaPredicted RBP31■■■□□ 2.55
NME3-202ENST00000561637 CCL5P13501 91 aa31■■■□□ 2.55
NME3-202ENST00000561637 GJA8P48165 433 aa31■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms