RNA–Protein interactions for RNA: ENST00000561152.1

TCF12-222, Transcript of transcription factor 12, human

TSL 5

Gene TCF12, Length 675 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-222	ENST00000561152	DDX4	Q9NQI0	724 aa	Known RBP	31.2	■■■□□ 2.59
TCF12-222	ENST00000561152	FZD1	Q9UP38	647 aa		31.2	■■■□□ 2.59
TCF12-222	ENST00000561152	SALL3	Q9BXA9	1300 aa		31.2	■■■□□ 2.58
TCF12-222	ENST00000561152	THSD7B	Q9C0I4	1608 aa		31.2	■■■□□ 2.58
TCF12-222	ENST00000561152	MYH7	P12883	1935 aa		31.2	■■■□□ 2.58
TCF12-222	ENST00000561152	SLC10A3	P09131	477 aa		31.19	■■■□□ 2.58
TCF12-222	ENST00000561152	ANKRD13A	Q8IZ07	590 aa		31.19	■■■□□ 2.58
TCF12-222	ENST00000561152	MIGA1	Q8NAN2	632 aa		31.19	■■■□□ 2.58
TCF12-222	ENST00000561152	PI4K2B	Q8TCG2	481 aa		31.19	■■■□□ 2.58
TCF12-222	ENST00000561152	ZNF532	Q9HCE3	1301 aa		31.19	■■■□□ 2.58
TCF12-222	ENST00000561152	CSRNP1	Q96S65	589 aa		31.18	■■■□□ 2.58
TCF12-222	ENST00000561152	STAP2	Q9UGK3	403 aa		31.18	■■■□□ 2.58
TCF12-222	ENST00000561152	COL2A1	P02458	1487 aa	Predicted RBP	31.18	■■■□□ 2.58
TCF12-222	ENST00000561152	ADD2	P35612	726 aa		31.17	■■■□□ 2.58
TCF12-222	ENST00000561152	RASAL3	Q86YV0	1011 aa		31.17	■■■□□ 2.58
TCF12-222	ENST00000561152	ZFPM1	Q8IX07	1006 aa		31.17	■■■□□ 2.58
TCF12-222	ENST00000561152	ZNF341	Q9BYN7	854 aa		31.17	■■■□□ 2.58
TCF12-222	ENST00000561152	OSBPL5	Q9H0X9	879 aa	Predicted RBP	31.17	■■■□□ 2.58
TCF12-222	ENST00000561152	FOCAD	Q5VW36	1801 aa		31.17	■■■□□ 2.58
TCF12-222	ENST00000561152	MAGEB6P1	A0A0J9YX57	407 aa		31.16	■■■□□ 2.58
TCF12-222	ENST00000561152	FAM155A	B1AL88	458 aa	Predicted RBP	31.16	■■■□□ 2.58
TCF12-222	ENST00000561152	DYNLL1	P63167	89 aa	Known RBP	31.16	■■■□□ 2.58
TCF12-222	ENST00000561152	LRRFIP1	Q32MZ4	808 aa	Known RBP	31.16	■■■□□ 2.58
TCF12-222	ENST00000561152	KBTBD3	Q8NAB2	608 aa		31.16	■■■□□ 2.58
TCF12-222	ENST00000561152	TGFBRAP1	Q8WUH2	860 aa		31.16	■■■□□ 2.58
TCF12-222	ENST00000561152	SLC10A4	Q96EP9	437 aa		31.16	■■■□□ 2.58
TCF12-222	ENST00000561152	ATRNL1	Q5VV63	1379 aa		31.16	■■■□□ 2.58
TCF12-222	ENST00000561152	CDK5RAP2	Q96SN8	1893 aa		31.15	■■■□□ 2.58
TCF12-222	ENST00000561152	TCRBV5S4A2T	A0A5A2	114 aa		31.15	■■■□□ 2.58
TCF12-222	ENST00000561152	PDE1A	P54750	535 aa		31.15	■■■□□ 2.58
TCF12-222	ENST00000561152	MAP2K1	Q02750	393 aa	Predicted RBP	31.15	■■■□□ 2.58
TCF12-222	ENST00000561152	UBE3C	Q15386	1083 aa		31.15	■■■□□ 2.58
TCF12-222	ENST00000561152	AOC2	O75106	756 aa		31.14	■■■□□ 2.58
TCF12-222	ENST00000561152	MAP3K9	P80192	1104 aa		31.14	■■■□□ 2.58
TCF12-222	ENST00000561152	MIGA2	Q7L4E1	593 aa		31.14	■■■□□ 2.58
TCF12-222	ENST00000561152	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	31.14	■■■□□ 2.58
TCF12-222	ENST00000561152	CSAD	Q9Y600	493 aa		31.14	■■■□□ 2.58
TCF12-222	ENST00000561152	OTOF	Q9HC10	1997 aa		31.14	■■■□□ 2.57
TCF12-222	ENST00000561152	DDTL	A6NHG4	134 aa	Predicted RBP	31.13	■■■□□ 2.57
TCF12-222	ENST00000561152	WRNIP1	Q96S55	665 aa		31.13	■■■□□ 2.57
TCF12-222	ENST00000561152	RIOK1	Q9BRS2	568 aa	Known RBP	31.13	■■■□□ 2.57
TCF12-222	ENST00000561152	DHX36	Q9H2U1	1008 aa	Known RBP	31.13	■■■□□ 2.57
TCF12-222	ENST00000561152	FLT1	P17948	1338 aa		31.13	■■■□□ 2.57
TCF12-222	ENST00000561152	ZFY	P08048	801 aa	Predicted RBP	31.12	■■■□□ 2.57
TCF12-222	ENST00000561152	USP5	P45974	858 aa		31.12	■■■□□ 2.57
TCF12-222	ENST00000561152	SH3BP5L	Q7L8J4	393 aa		31.12	■■■□□ 2.57
TCF12-222	ENST00000561152	MAPKAPK5	Q8IW41	473 aa		31.12	■■■□□ 2.57
TCF12-222	ENST00000561152	REM2	Q8IYK8	340 aa	Predicted RBP	31.12	■■■□□ 2.57
TCF12-222	ENST00000561152	NEFL	P07196	543 aa		31.11	■■■□□ 2.57
TCF12-222	ENST00000561152	CLMN	Q96JQ2	1002 aa		31.11	■■■□□ 2.57
TCF12-222	ENST00000561152	CRNKL1	Q9BZJ0	848 aa	Known RBP	31.11	■■■□□ 2.57
TCF12-222	ENST00000561152	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	31.1	■■■□□ 2.57
TCF12-222	ENST00000561152	VGLL4	Q14135	290 aa		31.09	■■■□□ 2.57
TCF12-222	ENST00000561152	BEGAIN	Q9BUH8	593 aa		31.09	■■■□□ 2.57
TCF12-222	ENST00000561152	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	31.09	■■■□□ 2.57
TCF12-222	ENST00000561152	TBC1D12	O60347	775 aa		31.08	■■■□□ 2.57
TCF12-222	ENST00000561152	ZBTB48	P10074	688 aa	Predicted RBP	31.08	■■■□□ 2.57
TCF12-222	ENST00000561152	KIF23	Q02241	960 aa	Predicted RBP	31.08	■■■□□ 2.57
TCF12-222	ENST00000561152	MAP3K10	Q02779	954 aa		31.08	■■■□□ 2.57
TCF12-222	ENST00000561152	SPRYD7	Q5W111	196 aa		31.08	■■■□□ 2.57
TCF12-222	ENST00000561152	AIDA	Q96BJ3	306 aa		31.08	■■■□□ 2.57
TCF12-222	ENST00000561152	FSD1	Q9BTV5	496 aa		31.08	■■■□□ 2.57
TCF12-222	ENST00000561152	PI4KB	Q9UBF8	816 aa		31.08	■■■□□ 2.57
TCF12-222	ENST00000561152	ZNF112	Q9UJU3	913 aa		31.08	■■■□□ 2.57
TCF12-222	ENST00000561152	RNF113A	O15541	343 aa	Known RBP	31.07	■■■□□ 2.56
TCF12-222	ENST00000561152	EVI5L	Q96CN4	794 aa		31.07	■■■□□ 2.56
TCF12-222	ENST00000561152	OSBPL3	Q9H4L5	887 aa		31.07	■■■□□ 2.56
TCF12-222	ENST00000561152	ELP3	Q9H9T3	547 aa		31.07	■■■□□ 2.56
TCF12-222	ENST00000561152	WBP1L	Q9NX94	342 aa		31.07	■■■□□ 2.56
TCF12-222	ENST00000561152	HLA-DOA	P06340	250 aa		31.06	■■■□□ 2.56
TCF12-222	ENST00000561152	HSPA1A	P0DMV8	641 aa	Known RBP	31.06	■■■□□ 2.56
TCF12-222	ENST00000561152	HSPA1B	P0DMV9	641 aa	Known RBP	31.06	■■■□□ 2.56
TCF12-222	ENST00000561152	PLEKHM2	Q8IWE5	1019 aa		31.06	■■■□□ 2.56
TCF12-222	ENST00000561152	WNK4	Q96J92	1243 aa		31.06	■■■□□ 2.56
TCF12-222	ENST00000561152	HERC5	Q9UII4	1024 aa	Known RBP	31.06	■■■□□ 2.56
TCF12-222	ENST00000561152	MYH1	P12882	1939 aa		31.06	■■■□□ 2.56
TCF12-222	ENST00000561152	MBD4	O95243	580 aa		31.05	■■■□□ 2.56
TCF12-222	ENST00000561152	LCORL	Q8N3X6	602 aa		31.05	■■■□□ 2.56
TCF12-222	ENST00000561152	APPBP2	Q92624	585 aa		31.05	■■■□□ 2.56
TCF12-222	ENST00000561152	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	31.05	■■■□□ 2.56
TCF12-222	ENST00000561152	SLFNL1	Q499Z3	407 aa		31.04	■■■□□ 2.56
TCF12-222	ENST00000561152	ZKSCAN4	Q969J2	545 aa	Predicted RBP	31.04	■■■□□ 2.56
TCF12-222	ENST00000561152	ZIC5	Q96T25	663 aa		31.04	■■■□□ 2.56
TCF12-222	ENST00000561152	TRIM34	Q9BYJ4	488 aa		31.04	■■■□□ 2.56
TCF12-222	ENST00000561152	ARMT1	Q9H993	441 aa		31.04	■■■□□ 2.56
TCF12-222	ENST00000561152	PCNT	O95613	3336 aa		31.04	■■■□□ 2.56
TCF12-222	ENST00000561152	INPP5B	P32019	993 aa		31.03	■■■□□ 2.56
TCF12-222	ENST00000561152	SREBF2	Q12772	1141 aa		31.03	■■■□□ 2.56
TCF12-222	ENST00000561152	MKRN3	Q13064	507 aa	Known RBP	31.03	■■■□□ 2.56
TCF12-222	ENST00000561152	FOXP4	Q8IVH2	680 aa	Predicted RBP	31.03	■■■□□ 2.56
TCF12-222	ENST00000561152	OPTN	Q96CV9	577 aa		31.03	■■■□□ 2.56
TCF12-222	ENST00000561152	SAP30BP	Q9UHR5	308 aa	Known RBP	31.03	■■■□□ 2.56
TCF12-222	ENST00000561152	PALD1	Q9ULE6	856 aa		31.03	■■■□□ 2.56
TCF12-222	ENST00000561152	SNCAIP	Q9Y6H5	919 aa		31.03	■■■□□ 2.56
TCF12-222	ENST00000561152	NAV1	Q8NEY1	1877 aa		31.02	■■■□□ 2.56
TCF12-222	ENST00000561152	NOL9	Q5SY16	702 aa	Known RBP	31.02	■■■□□ 2.56
TCF12-222	ENST00000561152	TTC6	Q86TZ1	520 aa		31.02	■■■□□ 2.56
TCF12-222	ENST00000561152	TICAM2	Q86XR7	235 aa		31.02	■■■□□ 2.56
TCF12-222	ENST00000561152	ERO1B	Q86YB8	467 aa		31.02	■■■□□ 2.56
TCF12-222	ENST00000561152	PUS7L	Q9H0K6	701 aa	Known RBP	31.02	■■■□□ 2.56

Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms