RNA–Protein interactions for RNA: ENST00000561061.5

ZEB1-221, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 970 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-221ENST00000561061 CSF1RP07333 972 aa8.52□□□□□ -1.05
ZEB1-221ENST00000561061 CASP7P55210 303 aa8.52□□□□□ -1.05
ZEB1-221ENST00000561061 FKBP1AP62942 108 aaKnown RBP8.52□□□□□ -1.05
ZEB1-221ENST00000561061 SUPT20HL1Q3ZLR7 823 aa8.52□□□□□ -1.05
ZEB1-221ENST00000561061 G2E3Q7L622 706 aa8.52□□□□□ -1.05
ZEB1-221ENST00000561061 ANKRD13AQ8IZ07 590 aa8.52□□□□□ -1.05
ZEB1-221ENST00000561061 LRCH3Q96II8 777 aa8.52□□□□□ -1.05
ZEB1-221ENST00000561061 PRMT6Q96LA8 375 aaPredicted RBP8.52□□□□□ -1.05
ZEB1-221ENST00000561061 MPHOSPH8Q99549 860 aa8.52□□□□□ -1.05
ZEB1-221ENST00000561061 CHMP4AQ9BY43 222 aa8.52□□□□□ -1.05
ZEB1-221ENST00000561061 ELP3Q9H9T3 547 aa8.52□□□□□ -1.05
ZEB1-221ENST00000561061 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.52□□□□□ -1.05
ZEB1-221ENST00000561061 PTCH2Q9Y6C5 1203 aa8.52□□□□□ -1.05
ZEB1-221ENST00000561061 MYO1BO43795 1136 aa8.51□□□□□ -1.05
ZEB1-221ENST00000561061 TAF5LO75529 589 aa8.51□□□□□ -1.05
ZEB1-221ENST00000561061 IL1R1P14778 569 aa8.51□□□□□ -1.05
ZEB1-221ENST00000561061 GCKRQ14397 625 aa8.51□□□□□ -1.05
ZEB1-221ENST00000561061 RASA3Q14644 834 aa8.51□□□□□ -1.05
ZEB1-221ENST00000561061 SLC9C1Q4G0N8 1177 aa8.51□□□□□ -1.05
ZEB1-221ENST00000561061 ZNF804AQ7Z570 1209 aa8.51□□□□□ -1.05
ZEB1-221ENST00000561061 HELBQ8NG08 1087 aaPredicted RBP8.51□□□□□ -1.05
ZEB1-221ENST00000561061 BRI3BPQ8WY22 251 aa8.51□□□□□ -1.05
ZEB1-221ENST00000561061 OPTNQ96CV9 577 aa8.51□□□□□ -1.05
ZEB1-221ENST00000561061 STK31Q9BXU1 1019 aa8.51□□□□□ -1.05
ZEB1-221ENST00000561061 JAG2Q9Y219 1238 aa8.51□□□□□ -1.05
ZEB1-221ENST00000561061 ADGRG1Q9Y653 693 aa8.51□□□□□ -1.05
ZEB1-221ENST00000561061 FRMPD3Q5JV73 1810 aa8.51□□□□□ -1.05
ZEB1-221ENST00000561061 CDK5RAP2Q96SN8 1893 aa8.51□□□□□ -1.05
ZEB1-221ENST00000561061 ANKRD18BA2A2Z9 1011 aa8.5□□□□□ -1.05
ZEB1-221ENST00000561061 FECHP22830 423 aa8.5□□□□□ -1.05
ZEB1-221ENST00000561061 TAF1CQ15572 869 aaPredicted RBP8.5□□□□□ -1.05
ZEB1-221ENST00000561061 TSR2Q969E8 191 aaKnown RBP8.5□□□□□ -1.05
ZEB1-221ENST00000561061 PLA2G2EQ9NZK7 142 aa8.5□□□□□ -1.05
ZEB1-221ENST00000561061 FAM205AQ6ZU69 1335 aa8.5□□□□□ -1.05
ZEB1-221ENST00000561061 CCL15-CCL14A0A0B4J2E2 113 aa8.49□□□□□ -1.05
ZEB1-221ENST00000561061 H0YGN5 161 aa8.49□□□□□ -1.05
ZEB1-221ENST00000561061 RBM5P52756 815 aaKnown RBP eCLIP8.49□□□□□ -1.05
ZEB1-221ENST00000561061 FLIIQ13045 1269 aa8.49□□□□□ -1.05
ZEB1-221ENST00000561061 DDX10Q13206 875 aaKnown RBP8.49□□□□□ -1.05
ZEB1-221ENST00000561061 TNFAIP1Q13829 316 aa8.49□□□□□ -1.05
ZEB1-221ENST00000561061 VGLL4Q14135 290 aa8.49□□□□□ -1.05
ZEB1-221ENST00000561061 HIC1Q14526 733 aa8.49□□□□□ -1.05
ZEB1-221ENST00000561061 CCL15Q16663 113 aa8.49□□□□□ -1.05
ZEB1-221ENST00000561061 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.49□□□□□ -1.05
ZEB1-221ENST00000561061 NBPF11Q86T75 865 aa8.49□□□□□ -1.05
ZEB1-221ENST00000561061 FAM43AQ8N2R8 423 aa8.49□□□□□ -1.05
ZEB1-221ENST00000561061 TEPSINQ96N21 525 aa8.49□□□□□ -1.05
ZEB1-221ENST00000561061 MYH16Q9H6N6 1097 aa8.49□□□□□ -1.05
ZEB1-221ENST00000561061 ZFYVE28Q9HCC9 887 aa8.49□□□□□ -1.05
ZEB1-221ENST00000561061 ZNF70Q9UC06 446 aaPredicted RBP8.49□□□□□ -1.05
ZEB1-221ENST00000561061 PLXNB2O15031 1838 aa8.49□□□□□ -1.05
ZEB1-221ENST00000561061 LAMA2P24043 3122 aaKnown RBP8.49□□□□□ -1.05
ZEB1-221ENST00000561061 LOC285556D6RIA3 1793 aa8.48□□□□□ -1.05
ZEB1-221ENST00000561061 GTF2A2P52657 109 aa8.48□□□□□ -1.05
ZEB1-221ENST00000561061 FOXO4P98177 505 aa8.48□□□□□ -1.05
ZEB1-221ENST00000561061 IFIT5Q13325 482 aaKnown RBP8.48□□□□□ -1.05
ZEB1-221ENST00000561061 ARHGEF6Q15052 776 aa8.48□□□□□ -1.05
ZEB1-221ENST00000561061 SLC4A8Q2Y0W8 1093 aa8.48□□□□□ -1.05
ZEB1-221ENST00000561061 TWISTNBQ3B726 338 aaPredicted RBP8.48□□□□□ -1.05
ZEB1-221ENST00000561061 SWT1Q5T5J6 900 aaKnown RBP8.48□□□□□ -1.05
ZEB1-221ENST00000561061 GPIHBP1Q8IV16 184 aa8.48□□□□□ -1.05
ZEB1-221ENST00000561061 LINS1Q8NG48 757 aa8.48□□□□□ -1.05
ZEB1-221ENST00000561061 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.48□□□□□ -1.05
ZEB1-221ENST00000561061 SH3TC2Q8TF17 1288 aa8.48□□□□□ -1.05
ZEB1-221ENST00000561061 DNAAF4Q8WXU2 420 aa8.48□□□□□ -1.05
ZEB1-221ENST00000561061 SHISA4Q96DD7 197 aa8.48□□□□□ -1.05
ZEB1-221ENST00000561061 ARHGAP39Q9C0H5 1083 aa8.48□□□□□ -1.05
ZEB1-221ENST00000561061 TMEM39BQ9GZU3 492 aa8.48□□□□□ -1.05
ZEB1-221ENST00000561061 TDRD3Q9H7E2 651 aaKnown RBP8.48□□□□□ -1.05
ZEB1-221ENST00000561061 TSR3Q9UJK0 312 aaKnown RBP8.48□□□□□ -1.05
ZEB1-221ENST00000561061 SERPINA10Q9UK55 444 aa8.48□□□□□ -1.05
ZEB1-221ENST00000561061 UNC80Q8N2C7 3258 aa8.48□□□□□ -1.05
ZEB1-221ENST00000561061 DNAH12Q6ZR08 3092 aa8.47□□□□□ -1.05
ZEB1-221ENST00000561061 DDX60LQ5H9U9 1706 aaKnown RBP8.47□□□□□ -1.05
ZEB1-221ENST00000561061 MYCP01106 439 aaPredicted RBP8.47□□□□□ -1.05
ZEB1-221ENST00000561061 FKBP5Q13451 457 aaPredicted RBP8.47□□□□□ -1.05
ZEB1-221ENST00000561061 MFSD14BQ5SR56 506 aa8.47□□□□□ -1.05
ZEB1-221ENST00000561061 DZIP1LQ8IYY4 767 aaKnown RBP8.47□□□□□ -1.05
ZEB1-221ENST00000561061 PRKRIP1Q9H875 184 aaPredicted RBP8.47□□□□□ -1.05
ZEB1-221ENST00000561061 TTF2Q9UNY4 1162 aaKnown RBP8.47□□□□□ -1.05
ZEB1-221ENST00000561061 CHMP3Q9Y3E7 222 aa8.47□□□□□ -1.05
ZEB1-221ENST00000561061 CSADQ9Y600 493 aa8.47□□□□□ -1.05
ZEB1-221ENST00000561061 SNCAIPQ9Y6H5 919 aa8.47□□□□□ -1.05
ZEB1-221ENST00000561061 MYO5AQ9Y4I1 1855 aaKnown RBP8.47□□□□□ -1.05
ZEB1-221ENST00000561061 FOCADQ5VW36 1801 aa8.46□□□□□ -1.06
ZEB1-221ENST00000561061 SPDYE5A6NIY4 337 aa8.46□□□□□ -1.06
ZEB1-221ENST00000561061 TCP10L2B9ZVM9 353 aa8.46□□□□□ -1.06
ZEB1-221ENST00000561061 BTBD19C9JJ37 291 aa8.46□□□□□ -1.06
ZEB1-221ENST00000561061 PLIN1O60240 522 aa8.46□□□□□ -1.06
ZEB1-221ENST00000561061 TLR2O60603 784 aa8.46□□□□□ -1.06
ZEB1-221ENST00000561061 RNF40O75150 1001 aa8.46□□□□□ -1.06
ZEB1-221ENST00000561061 CRKP46108 304 aa8.46□□□□□ -1.06
ZEB1-221ENST00000561061 LACTBP83111 547 aaPredicted RBP8.46□□□□□ -1.06
ZEB1-221ENST00000561061 EPHA10Q5JZY3 1008 aa8.46□□□□□ -1.06
ZEB1-221ENST00000561061 TDRD7Q8NHU6 1098 aaKnown RBP8.46□□□□□ -1.06
ZEB1-221ENST00000561061 ZNF594Q96JF6 807 aaPredicted RBP8.46□□□□□ -1.06
ZEB1-221ENST00000561061 ZCCHC17Q9NP64 241 aaKnown RBP8.46□□□□□ -1.06
ZEB1-221ENST00000561061 MYO9BQ13459 2157 aa8.46□□□□□ -1.06
ZEB1-221ENST00000561061 RPAP1Q9BWH6 1393 aaPredicted RBP8.46□□□□□ -1.06
ZEB1-221ENST00000561061 CETPP11597 493 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms