RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 SGMS1Q86VZ5 419 aa20.13■□□□□ 0.81
HDDC3-206ENST00000561036 TMTC2Q8N394 836 aa20.13■□□□□ 0.81
HDDC3-206ENST00000561036 IGDCC4Q8TDY8 1250 aa20.13■□□□□ 0.81
HDDC3-206ENST00000561036 SH3RF3Q8TEJ3 882 aaPredicted RBP20.13■□□□□ 0.81
HDDC3-206ENST00000561036 ESR2Q92731 530 aa20.13■□□□□ 0.81
HDDC3-206ENST00000561036 ZSWIM5Q9P217 1185 aa20.13■□□□□ 0.81
HDDC3-206ENST00000561036 KIF3AQ9Y496 699 aa20.13■□□□□ 0.81
HDDC3-206ENST00000561036 TACC3Q9Y6A5 838 aa20.13■□□□□ 0.81
HDDC3-206ENST00000561036 KLF18A0A0U1RQI7 1052 aa20.12■□□□□ 0.81
HDDC3-206ENST00000561036 ORC4O43929 436 aa20.12■□□□□ 0.81
HDDC3-206ENST00000561036 ZSCAN22P10073 491 aaPredicted RBP20.12■□□□□ 0.81
HDDC3-206ENST00000561036 DPEP1P16444 411 aa20.12■□□□□ 0.81
HDDC3-206ENST00000561036 KCNA3P22001 575 aa20.12■□□□□ 0.81
HDDC3-206ENST00000561036 BTDP43251 543 aa20.12■□□□□ 0.81
HDDC3-206ENST00000561036 USP5P45974 858 aa20.12■□□□□ 0.81
HDDC3-206ENST00000561036 TMEM67Q5HYA8 995 aa20.12■□□□□ 0.81
HDDC3-206ENST00000561036 STRIP1Q5VSL9 837 aa20.12■□□□□ 0.81
HDDC3-206ENST00000561036 AMOTL1Q8IY63 956 aa20.12■□□□□ 0.81
HDDC3-206ENST00000561036 PSMD1Q99460 953 aa20.12■□□□□ 0.81
HDDC3-206ENST00000561036 MRIQ9BWK5 157 aa20.12■□□□□ 0.81
HDDC3-206ENST00000561036 VPS33BQ9H267 617 aa20.12■□□□□ 0.81
HDDC3-206ENST00000561036 LAMB1P07942 1786 aa20.11■□□□□ 0.81
HDDC3-206ENST00000561036 IFIT3O14879 490 aaKnown RBP20.11■□□□□ 0.81
HDDC3-206ENST00000561036 LY9Q9HBG7 655 aa20.11■□□□□ 0.81
HDDC3-206ENST00000561036 GPHNQ9NQX3 736 aaPredicted RBP20.11■□□□□ 0.81
HDDC3-206ENST00000561036 BRPF3Q9ULD4 1205 aa20.11■□□□□ 0.81
HDDC3-206ENST00000561036 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.11■□□□□ 0.81
HDDC3-206ENST00000561036 ATP6V1DQ9Y5K8 247 aa20.11■□□□□ 0.81
HDDC3-206ENST00000561036 ERICH2A1L162 156 aa20.1■□□□□ 0.81
HDDC3-206ENST00000561036 GOLGA8BA8MQT2 603 aa20.1■□□□□ 0.81
HDDC3-206ENST00000561036 ECE2O60344 883 aa20.1■□□□□ 0.81
HDDC3-206ENST00000561036 ZBTB7AO95365 584 aa20.1■□□□□ 0.81
HDDC3-206ENST00000561036 RCAN1P53805 252 aa20.1■□□□□ 0.81
HDDC3-206ENST00000561036 C12orf60Q5U649 245 aa20.1■□□□□ 0.81
HDDC3-206ENST00000561036 LARP1BQ659C4 914 aaKnown RBP20.1■□□□□ 0.81
HDDC3-206ENST00000561036 HHIPL2Q6UWX4 724 aa20.1■□□□□ 0.81
HDDC3-206ENST00000561036 CERS5Q8N5B7 392 aa20.1■□□□□ 0.81
HDDC3-206ENST00000561036 NSUN7Q8NE18 718 aaKnown RBP20.1■□□□□ 0.81
HDDC3-206ENST00000561036 INCENPQ9NQS7 918 aa20.1■□□□□ 0.81
HDDC3-206ENST00000561036 TOMM22Q9NS69 142 aa20.1■□□□□ 0.81
HDDC3-206ENST00000561036 ZNF219Q9P2Y4 722 aaPredicted RBP20.1■□□□□ 0.81
HDDC3-206ENST00000561036 ROBO3Q96MS0 1386 aa20.09■□□□□ 0.81
HDDC3-206ENST00000561036 C21orf2O43822 256 aa20.09■□□□□ 0.81
HDDC3-206ENST00000561036 HDLBPQ00341 1268 aaKnown RBP20.09■□□□□ 0.81
HDDC3-206ENST00000561036 PDE4BQ07343 736 aa20.09■□□□□ 0.81
HDDC3-206ENST00000561036 RRP12Q5JTH9 1297 aaKnown RBP20.09■□□□□ 0.81
HDDC3-206ENST00000561036 FBXW7Q969H0 707 aa20.09■□□□□ 0.81
HDDC3-206ENST00000561036 DBNDD1Q9H9R9 158 aa20.09■□□□□ 0.81
HDDC3-206ENST00000561036 MCM9Q9NXL9 1143 aa20.09■□□□□ 0.81
HDDC3-206ENST00000561036 NAP1L2Q9ULW6 460 aaPredicted RBP20.09■□□□□ 0.81
HDDC3-206ENST00000561036 TTF2Q9UNY4 1162 aaKnown RBP20.09■□□□□ 0.81
HDDC3-206ENST00000561036 HPS5Q9UPZ3 1129 aa20.09■□□□□ 0.81
HDDC3-206ENST00000561036 MTMR6Q9Y217 621 aa20.09■□□□□ 0.81
HDDC3-206ENST00000561036 DAGLAQ9Y4D2 1042 aa20.09■□□□□ 0.81
HDDC3-206ENST00000561036 BAZ2AQ9UIF9 1905 aaKnown RBP20.09■□□□□ 0.81
HDDC3-206ENST00000561036 USP17L3A6NCW0 530 aa20.08■□□□□ 0.81
HDDC3-206ENST00000561036 USP17L4A6NCW7 530 aa20.08■□□□□ 0.81
HDDC3-206ENST00000561036 RHBDL3P58872 404 aa20.08■□□□□ 0.81
HDDC3-206ENST00000561036 CCT2P78371 535 aaKnown RBP20.08■□□□□ 0.81
HDDC3-206ENST00000561036 SKOR2Q2VWA4 1001 aaPredicted RBP20.08■□□□□ 0.81
HDDC3-206ENST00000561036 USP17L1Q7RTZ2 530 aa20.08■□□□□ 0.81
HDDC3-206ENST00000561036 TEX11Q8IYF3 940 aa20.08■□□□□ 0.81
HDDC3-206ENST00000561036 NKX2-3Q8TAU0 364 aa20.08■□□□□ 0.81
HDDC3-206ENST00000561036 UPF1Q92900 1129 aaKnown RBP eCLIP20.08■□□□□ 0.81
HDDC3-206ENST00000561036 UBAC1Q9BSL1 405 aa20.08■□□□□ 0.81
HDDC3-206ENST00000561036 PIM2Q9P1W9 311 aa20.08■□□□□ 0.81
HDDC3-206ENST00000561036 NID2Q14112 1375 aa20.08■□□□□ 0.8
HDDC3-206ENST00000561036 CYP2D7A0A087X1C5 515 aa20.07■□□□□ 0.8
HDDC3-206ENST00000561036 CCDC69A6NI79 296 aa20.07■□□□□ 0.8
HDDC3-206ENST00000561036 JAK2O60674 1132 aa20.07■□□□□ 0.8
HDDC3-206ENST00000561036 CTDNEP1O95476 244 aa20.07■□□□□ 0.8
HDDC3-206ENST00000561036 F13A1P00488 732 aa20.07■□□□□ 0.8
HDDC3-206ENST00000561036 WTAPQ15007 396 aa20.07■□□□□ 0.8
HDDC3-206ENST00000561036 DACT2Q5SW24 774 aa20.07■□□□□ 0.8
HDDC3-206ENST00000561036 APOA5Q6Q788 366 aa20.07■□□□□ 0.8
HDDC3-206ENST00000561036 SYNE3Q6ZMZ3 975 aa20.07■□□□□ 0.8
HDDC3-206ENST00000561036 NFXL1Q6ZNB6 911 aa20.07■□□□□ 0.8
HDDC3-206ENST00000561036 FAM184AQ8NB25 1140 aa20.07■□□□□ 0.8
HDDC3-206ENST00000561036 RGS22Q8NE09 1264 aa20.07■□□□□ 0.8
HDDC3-206ENST00000561036 TGFBRAP1Q8WUH2 860 aa20.07■□□□□ 0.8
HDDC3-206ENST00000561036 TEKT1Q969V4 418 aa20.07■□□□□ 0.8
HDDC3-206ENST00000561036 ATF5Q9Y2D1 282 aaPredicted RBP20.07■□□□□ 0.8
HDDC3-206ENST00000561036 PTPDC1A2A3K4 754 aa20.06■□□□□ 0.8
HDDC3-206ENST00000561036 ZBTB43O43298 467 aa20.06■□□□□ 0.8
HDDC3-206ENST00000561036 PPIP5K2O43314 1243 aa20.06■□□□□ 0.8
HDDC3-206ENST00000561036 CDKL5O76039 1030 aa20.06■□□□□ 0.8
HDDC3-206ENST00000561036 USP17L8P0C7I0 530 aa20.06■□□□□ 0.8
HDDC3-206ENST00000561036 AOC3Q16853 763 aa20.06■□□□□ 0.8
HDDC3-206ENST00000561036 CPLX2Q6PUV4 134 aaKnown RBP20.06■□□□□ 0.8
HDDC3-206ENST00000561036 IQCA1Q86XH1 822 aa20.06■□□□□ 0.8
HDDC3-206ENST00000561036 NAV1Q8NEY1 1877 aa20.06■□□□□ 0.8
HDDC3-206ENST00000561036 ZNF287Q9HBT7 754 aa20.06■□□□□ 0.8
HDDC3-206ENST00000561036 CD2APQ9Y5K6 639 aa20.06■□□□□ 0.8
HDDC3-206ENST00000561036 SLC12A7Q9Y666 1083 aa20.06■□□□□ 0.8
HDDC3-206ENST00000561036 METAP2P50579 478 aaKnown RBP eCLIP20.05■□□□□ 0.8
HDDC3-206ENST00000561036 R3HDM1Q15032 1099 aaKnown RBP20.05■□□□□ 0.8
HDDC3-206ENST00000561036 ZSCAN10Q96SZ4 725 aaPredicted RBP20.05■□□□□ 0.8
HDDC3-206ENST00000561036 NCOA5Q9HCD5 579 aaKnown RBP20.05■□□□□ 0.8
HDDC3-206ENST00000561036 CPLX1O14810 134 aa20.04■□□□□ 0.8
HDDC3-206ENST00000561036 POLR3DP05423 398 aaPredicted RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms