RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 EPHB1P54762 984 aa7.91□□□□□ -1.14
TSPAN3-209ENST00000560715 PTPN12Q05209 780 aaKnown RBP7.91□□□□□ -1.14
TSPAN3-209ENST00000560715 APOBRQ0VD83 1088 aa7.91□□□□□ -1.14
TSPAN3-209ENST00000560715 C1QTNF12Q5T7M4 302 aa7.91□□□□□ -1.14
TSPAN3-209ENST00000560715 LARP1BQ659C4 914 aaKnown RBP7.91□□□□□ -1.14
TSPAN3-209ENST00000560715 LYPD8Q6UX82 237 aa7.91□□□□□ -1.14
TSPAN3-209ENST00000560715 STRA8Q7Z7C7 330 aa7.91□□□□□ -1.14
TSPAN3-209ENST00000560715 RETREG3Q86VR2 466 aa7.91□□□□□ -1.14
TSPAN3-209ENST00000560715 STIM2Q9P246 746 aa7.91□□□□□ -1.14
TSPAN3-209ENST00000560715 EVLQ9UI08 416 aaPredicted RBP7.91□□□□□ -1.14
TSPAN3-209ENST00000560715 ADGRB3O60242 1522 aa7.91□□□□□ -1.14
TSPAN3-209ENST00000560715 PLEKHH1Q9ULM0 1364 aa7.91□□□□□ -1.14
TSPAN3-209ENST00000560715 CRKP46108 304 aa7.91□□□□□ -1.14
TSPAN3-209ENST00000560715 PPM1FP49593 454 aaPredicted RBP7.91□□□□□ -1.14
TSPAN3-209ENST00000560715 RASSF7Q02833 373 aa7.91□□□□□ -1.14
TSPAN3-209ENST00000560715 ITKQ08881 620 aa7.91□□□□□ -1.14
TSPAN3-209ENST00000560715 TPH2Q8IWU9 490 aa7.91□□□□□ -1.14
TSPAN3-209ENST00000560715 SDR16C5Q8N3Y7 309 aa7.91□□□□□ -1.14
TSPAN3-209ENST00000560715 TRPM4Q8TD43 1214 aa7.91□□□□□ -1.14
TSPAN3-209ENST00000560715 MKL1Q969V6 931 aa7.91□□□□□ -1.14
TSPAN3-209ENST00000560715 SLC27A5Q9Y2P5 690 aa7.91□□□□□ -1.14
TSPAN3-209ENST00000560715 PCDHGA4Q9Y5G9 962 aa7.91□□□□□ -1.14
TSPAN3-209ENST00000560715 UGGT1Q9NYU2 1555 aa7.91□□□□□ -1.14
TSPAN3-209ENST00000560715 NRXN1Q9ULB1 1477 aa7.9□□□□□ -1.14
TSPAN3-209ENST00000560715 PPLO60437 1756 aa7.9□□□□□ -1.14
TSPAN3-209ENST00000560715 TIMM44O43615 452 aa7.9□□□□□ -1.14
TSPAN3-209ENST00000560715 MYL3P08590 195 aa7.9□□□□□ -1.14
TSPAN3-209ENST00000560715 POU5F1Q01860 360 aaKnown RBP7.9□□□□□ -1.14
TSPAN3-209ENST00000560715 SYCP1Q15431 976 aa7.9□□□□□ -1.14
TSPAN3-209ENST00000560715 CC2D1BQ5T0F9 858 aaKnown RBP7.9□□□□□ -1.14
TSPAN3-209ENST00000560715 FBXW10Q5XX13 1052 aa7.9□□□□□ -1.14
TSPAN3-209ENST00000560715 LRSAM1Q6UWE0 723 aa7.9□□□□□ -1.14
TSPAN3-209ENST00000560715 HDGFL2Q7Z4V5 671 aaPredicted RBP7.9□□□□□ -1.14
TSPAN3-209ENST00000560715 RASGRP4Q8TDF6 673 aa7.9□□□□□ -1.14
TSPAN3-209ENST00000560715 JPH3Q8WXH2 748 aaPredicted RBP7.9□□□□□ -1.14
TSPAN3-209ENST00000560715 SEPT9Q9UHD8 586 aaPredicted RBP7.9□□□□□ -1.14
TSPAN3-209ENST00000560715 CFAP65Q6ZU64 1925 aaKnown RBP7.9□□□□□ -1.14
TSPAN3-209ENST00000560715 NPATQ14207 1427 aa7.9□□□□□ -1.14
TSPAN3-209ENST00000560715 DISP3Q9P2K9 1392 aa7.9□□□□□ -1.14
TSPAN3-209ENST00000560715 KDM4FA0A1W2PPD8 638 aa7.9□□□□□ -1.15
TSPAN3-209ENST00000560715 AGR2O95994 175 aa7.9□□□□□ -1.15
TSPAN3-209ENST00000560715 SERPINB3P29508 390 aa7.9□□□□□ -1.15
TSPAN3-209ENST00000560715 SLFN5Q08AF3 891 aa7.9□□□□□ -1.15
TSPAN3-209ENST00000560715 TAF1CQ15572 869 aaPredicted RBP7.9□□□□□ -1.15
TSPAN3-209ENST00000560715 NXPE4Q6UWF7 544 aa7.9□□□□□ -1.15
TSPAN3-209ENST00000560715 PCGF5Q86SE9 256 aa7.9□□□□□ -1.15
TSPAN3-209ENST00000560715 TRMT2AQ8IZ69 625 aaKnown RBP7.9□□□□□ -1.15
TSPAN3-209ENST00000560715 SVIPQ8NHG7 77 aa7.9□□□□□ -1.15
TSPAN3-209ENST00000560715 YIPF4Q9BSR8 244 aa7.9□□□□□ -1.15
TSPAN3-209ENST00000560715 COPB2P35606 906 aa7.89□□□□□ -1.15
TSPAN3-209ENST00000560715 GEMIN4P57678 1058 aaKnown RBP7.89□□□□□ -1.15
TSPAN3-209ENST00000560715 ACBD5Q5T8D3 534 aaPredicted RBP7.89□□□□□ -1.15
TSPAN3-209ENST00000560715 ERMP1Q7Z2K6 904 aa7.89□□□□□ -1.15
TSPAN3-209ENST00000560715 SPICE1Q8N0Z3 855 aa7.89□□□□□ -1.15
TSPAN3-209ENST00000560715 EDEM1Q92611 657 aa7.89□□□□□ -1.15
TSPAN3-209ENST00000560715 TNKS2Q9H2K2 1166 aa7.89□□□□□ -1.15
TSPAN3-209ENST00000560715 LMBRD1Q9NUN5 540 aa7.89□□□□□ -1.15
TSPAN3-209ENST00000560715 TLR6Q9Y2C9 796 aa7.89□□□□□ -1.15
TSPAN3-209ENST00000560715 RAPGEF3O95398 923 aa7.89□□□□□ -1.15
TSPAN3-209ENST00000560715 F12P00748 615 aaPredicted RBP7.89□□□□□ -1.15
TSPAN3-209ENST00000560715 STAT3P40763 770 aa7.89□□□□□ -1.15
TSPAN3-209ENST00000560715 TNNT3P45378 269 aaPredicted RBP7.89□□□□□ -1.15
TSPAN3-209ENST00000560715 NOP2P46087 812 aaKnown RBP7.89□□□□□ -1.15
TSPAN3-209ENST00000560715 IFRD2Q12894 506 aaPredicted RBP7.89□□□□□ -1.15
TSPAN3-209ENST00000560715 CHAF1AQ13111 956 aaPredicted RBP7.89□□□□□ -1.15
TSPAN3-209ENST00000560715 NGLY1Q96IV0 654 aa7.89□□□□□ -1.15
TSPAN3-209ENST00000560715 FRMD4BQ9Y2L6 1034 aa7.89□□□□□ -1.15
TSPAN3-209ENST00000560715 HCN4Q9Y3Q4 1203 aa7.89□□□□□ -1.15
TSPAN3-209ENST00000560715 GJA3Q9Y6H8 435 aa7.89□□□□□ -1.15
TSPAN3-209ENST00000560715 SETBP1Q9Y6X0 1596 aa7.89□□□□□ -1.15
TSPAN3-209ENST00000560715 PDPK1O15530 556 aa7.89□□□□□ -1.15
TSPAN3-209ENST00000560715 KCNQ2O43526 872 aa7.89□□□□□ -1.15
TSPAN3-209ENST00000560715 BCAR3O75815 825 aa7.89□□□□□ -1.15
TSPAN3-209ENST00000560715 CFHP08603 1231 aa7.89□□□□□ -1.15
TSPAN3-209ENST00000560715 VPS72Q15906 364 aa7.89□□□□□ -1.15
TSPAN3-209ENST00000560715 ETFBKMTQ8IXQ9 262 aa7.89□□□□□ -1.15
TSPAN3-209ENST00000560715 ALKBH8Q96BT7 664 aaKnown RBP7.89□□□□□ -1.15
TSPAN3-209ENST00000560715 HOOK2Q96ED9 719 aa7.89□□□□□ -1.15
TSPAN3-209ENST00000560715 DNAJC25Q9H1X3 360 aa7.89□□□□□ -1.15
TSPAN3-209ENST00000560715 AASDHPPTQ9NRN7 309 aa7.89□□□□□ -1.15
TSPAN3-209ENST00000560715 ZNF358Q9NW07 568 aa7.89□□□□□ -1.15
TSPAN3-209ENST00000560715 SERTAD1Q9UHV2 236 aa7.89□□□□□ -1.15
TSPAN3-209ENST00000560715 PIK3C2BO00750 1634 aa7.88□□□□□ -1.15
TSPAN3-209ENST00000560715 SIGLEC1Q9BZZ2 1709 aa7.88□□□□□ -1.15
TSPAN3-209ENST00000560715 NKTRP30414 1462 aaKnown RBP7.88□□□□□ -1.15
TSPAN3-209ENST00000560715 GGT6Q6P531 493 aa7.88□□□□□ -1.15
TSPAN3-209ENST00000560715 CTR9Q6PD62 1173 aa7.88□□□□□ -1.15
TSPAN3-209ENST00000560715 KRT222Q8N1A0 295 aa7.88□□□□□ -1.15
TSPAN3-209ENST00000560715 MYCBPQ99417 103 aaPredicted RBP7.88□□□□□ -1.15
TSPAN3-209ENST00000560715 TRIM8Q9BZR9 551 aa7.88□□□□□ -1.15
TSPAN3-209ENST00000560715 RSPH9Q9H1X1 276 aaPredicted RBP7.88□□□□□ -1.15
TSPAN3-209ENST00000560715 MYO3AQ8NEV4 1616 aa7.88□□□□□ -1.15
TSPAN3-209ENST00000560715 SYNMO15061 1565 aa7.88□□□□□ -1.15
TSPAN3-209ENST00000560715 NOS1P29475 1434 aa7.88□□□□□ -1.15
TSPAN3-209ENST00000560715 ERICH4A6NGS2 130 aa7.88□□□□□ -1.15
TSPAN3-209ENST00000560715 TNFRSF21O75509 655 aa7.88□□□□□ -1.15
TSPAN3-209ENST00000560715 NCBP1Q09161 790 aaKnown RBP7.88□□□□□ -1.15
TSPAN3-209ENST00000560715 MLC1Q15049 377 aa7.88□□□□□ -1.15
TSPAN3-209ENST00000560715 DDR2Q16832 855 aa7.88□□□□□ -1.15
TSPAN3-209ENST00000560715 SLC39A7Q92504 469 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms