RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 PTPN5P54829 565 aa8.63□□□□□ -1.03
HERC1-208ENST00000560462 DLGAP5Q15398 846 aa8.63□□□□□ -1.03
HERC1-208ENST00000560462 MICALL1Q8N3F8 863 aa8.63□□□□□ -1.03
HERC1-208ENST00000560462 CNTNAP3BQ96NU0 1288 aa8.63□□□□□ -1.03
HERC1-208ENST00000560462 TMEM121BQ9BXQ6 578 aaPredicted RBP8.63□□□□□ -1.03
HERC1-208ENST00000560462 CNTNAP3Q9BZ76 1288 aa8.63□□□□□ -1.03
HERC1-208ENST00000560462 CD320Q9NPF0 282 aa8.63□□□□□ -1.03
HERC1-208ENST00000560462 KCNH4Q9UQ05 1017 aa8.63□□□□□ -1.03
HERC1-208ENST00000560462 MYO1BO43795 1136 aa8.62□□□□□ -1.03
HERC1-208ENST00000560462 RASA3Q14644 834 aa8.62□□□□□ -1.03
HERC1-208ENST00000560462 STRIP1Q5VSL9 837 aa8.62□□□□□ -1.03
HERC1-208ENST00000560462 ERO1BQ86YB8 467 aa8.62□□□□□ -1.03
HERC1-208ENST00000560462 KIAA0825Q8IV33 1275 aa8.62□□□□□ -1.03
HERC1-208ENST00000560462 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.62□□□□□ -1.03
HERC1-208ENST00000560462 HERVK_113Q902F9 699 aa8.62□□□□□ -1.03
HERC1-208ENST00000560462 COA7Q96BR5 231 aa8.62□□□□□ -1.03
HERC1-208ENST00000560462 PARK7Q99497 189 aaKnown RBP8.62□□□□□ -1.03
HERC1-208ENST00000560462 ARID3AQ99856 593 aa8.62□□□□□ -1.03
HERC1-208ENST00000560462 SENP6Q9GZR1 1112 aaPredicted RBP8.62□□□□□ -1.03
HERC1-208ENST00000560462 VEZTQ9HBM0 779 aa8.62□□□□□ -1.03
HERC1-208ENST00000560462 PRDM5Q9NQX1 630 aaPredicted RBP8.62□□□□□ -1.03
HERC1-208ENST00000560462 MAST2Q6P0Q8 1798 aa8.62□□□□□ -1.03
HERC1-208ENST00000560462 LRRC37A2A6NM11 1700 aa8.62□□□□□ -1.03
HERC1-208ENST00000560462 SIPA1L3O60292 1781 aaPredicted RBP8.61□□□□□ -1.03
HERC1-208ENST00000560462 CLRN2A0PK11 232 aa8.61□□□□□ -1.03
HERC1-208ENST00000560462 GNAT3A8MTJ3 354 aa8.61□□□□□ -1.03
HERC1-208ENST00000560462 HMOX1P09601 288 aa8.61□□□□□ -1.03
HERC1-208ENST00000560462 IL13P35225 146 aa8.61□□□□□ -1.03
HERC1-208ENST00000560462 ATN1P54259 1190 aaPredicted RBP8.61□□□□□ -1.03
HERC1-208ENST00000560462 TRIM32Q13049 653 aa8.61□□□□□ -1.03
HERC1-208ENST00000560462 COG5Q9UP83 839 aa8.61□□□□□ -1.03
HERC1-208ENST00000560462 MGAMO43451 1857 aa8.6□□□□□ -1.03
HERC1-208ENST00000560462 CHD7Q9P2D1 2997 aa8.6□□□□□ -1.03
HERC1-208ENST00000560462 MED19A0JLT2 244 aaPredicted RBP8.6□□□□□ -1.03
HERC1-208ENST00000560462 GABBR2O75899 941 aa8.6□□□□□ -1.03
HERC1-208ENST00000560462 RTP1P59025 263 aa8.6□□□□□ -1.03
HERC1-208ENST00000560462 PPIL2Q13356 520 aa8.6□□□□□ -1.03
HERC1-208ENST00000560462 PRSS33Q8NF86 280 aa8.6□□□□□ -1.03
HERC1-208ENST00000560462 ANKS1AQ92625 1134 aa8.6□□□□□ -1.03
HERC1-208ENST00000560462 MFSD14AQ96MC6 490 aa8.6□□□□□ -1.03
HERC1-208ENST00000560462 SNCAIPQ9Y6H5 919 aa8.6□□□□□ -1.03
HERC1-208ENST00000560462 COL4A1P02462 1669 aa8.59□□□□□ -1.03
HERC1-208ENST00000560462 SH3TC1Q8TE82 1336 aa8.59□□□□□ -1.03
HERC1-208ENST00000560462 C2orf72A6NCS6 295 aa8.59□□□□□ -1.03
HERC1-208ENST00000560462 CYP2C8P10632 490 aa8.59□□□□□ -1.03
HERC1-208ENST00000560462 RPS8P62241 208 aaKnown RBP8.59□□□□□ -1.03
HERC1-208ENST00000560462 CCDC129Q6ZRS4 1044 aa8.59□□□□□ -1.03
HERC1-208ENST00000560462 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.59□□□□□ -1.03
HERC1-208ENST00000560462 PCMTD1Q96MG8 357 aaPredicted RBP8.59□□□□□ -1.03
HERC1-208ENST00000560462 BMP2KQ9NSY1 1161 aaPredicted RBP8.59□□□□□ -1.03
HERC1-208ENST00000560462 TRMT112Q9UI30 125 aaKnown RBP8.59□□□□□ -1.03
HERC1-208ENST00000560462 TRIM35Q9UPQ4 493 aa8.59□□□□□ -1.03
HERC1-208ENST00000560462 ATP11BQ9Y2G3 1177 aa8.59□□□□□ -1.03
HERC1-208ENST00000560462 RRP7AQ9Y3A4 280 aaKnown RBP8.59□□□□□ -1.03
HERC1-208ENST00000560462 CEMIPQ8WUJ3 1361 aa8.59□□□□□ -1.03
HERC1-208ENST00000560462 TRANK1O15050 2925 aa8.58□□□□□ -1.04
HERC1-208ENST00000560462 ZNF318Q5VUA4 2279 aa8.58□□□□□ -1.04
HERC1-208ENST00000560462 MYL6BP14649 208 aa8.58□□□□□ -1.04
HERC1-208ENST00000560462 PBX2P40425 430 aa8.58□□□□□ -1.04
HERC1-208ENST00000560462 TNFAIP1Q13829 316 aa8.58□□□□□ -1.04
HERC1-208ENST00000560462 HFE2Q6ZVN8 426 aa8.58□□□□□ -1.04
HERC1-208ENST00000560462 GJD3Q8N144 294 aa8.58□□□□□ -1.04
HERC1-208ENST00000560462 PDCD7Q8N8D1 485 aaKnown RBP8.58□□□□□ -1.04
HERC1-208ENST00000560462 PBX4Q9BYU1 374 aa8.58□□□□□ -1.04
HERC1-208ENST00000560462 PTPRZ1P23471 2315 aaPredicted RBP8.58□□□□□ -1.04
HERC1-208ENST00000560462 TRAK2O60296 914 aa8.57□□□□□ -1.04
HERC1-208ENST00000560462 FECHP22830 423 aa8.57□□□□□ -1.04
HERC1-208ENST00000560462 EPHB4P54760 987 aa8.57□□□□□ -1.04
HERC1-208ENST00000560462 PTGDRQ13258 359 aa8.57□□□□□ -1.04
HERC1-208ENST00000560462 MAP3K21Q5TCX8 1036 aa8.57□□□□□ -1.04
HERC1-208ENST00000560462 OXER1Q8TDS5 423 aa8.57□□□□□ -1.04
HERC1-208ENST00000560462 ZKSCAN4Q969J2 545 aaPredicted RBP8.57□□□□□ -1.04
HERC1-208ENST00000560462 PRRX2Q99811 253 aa8.57□□□□□ -1.04
HERC1-208ENST00000560462 NCOR2Q9Y618 2525 aa8.57□□□□□ -1.04
HERC1-208ENST00000560462 TPRP12270 2363 aaKnown RBP8.56□□□□□ -1.04
HERC1-208ENST00000560462 DCXO43602 365 aa8.56□□□□□ -1.04
HERC1-208ENST00000560462 TBC1D12O60347 775 aa8.56□□□□□ -1.04
HERC1-208ENST00000560462 SSTR3P32745 418 aaPredicted RBP8.56□□□□□ -1.04
HERC1-208ENST00000560462 PPATQ06203 517 aa8.56□□□□□ -1.04
HERC1-208ENST00000560462 SF3B3Q15393 1217 aaKnown RBP8.56□□□□□ -1.04
HERC1-208ENST00000560462 SH3D19Q5HYK7 790 aa8.56□□□□□ -1.04
HERC1-208ENST00000560462 LHX8Q68G74 356 aa8.56□□□□□ -1.04
HERC1-208ENST00000560462 TTLL5Q6EMB2 1281 aa8.56□□□□□ -1.04
HERC1-208ENST00000560462 NLRP10Q86W26 655 aa8.56□□□□□ -1.04
HERC1-208ENST00000560462 CDAN1Q8IWY9 1227 aa8.56□□□□□ -1.04
HERC1-208ENST00000560462 HLA-CQ95604 372 aa8.56□□□□□ -1.04
HERC1-208ENST00000560462 BOLA1Q9Y3E2 137 aa8.56□□□□□ -1.04
HERC1-208ENST00000560462 PCDHAC2Q9Y5I4 1007 aa8.56□□□□□ -1.04
HERC1-208ENST00000560462 XDHP47989 1333 aa8.55□□□□□ -1.04
HERC1-208ENST00000560462 ZNF292O60281 2723 aa8.55□□□□□ -1.04
HERC1-208ENST00000560462 ACACBO00763 2458 aa8.55□□□□□ -1.04
HERC1-208ENST00000560462 TRIM43BA6NCK2 446 aa8.55□□□□□ -1.04
HERC1-208ENST00000560462 PDIA4P13667 645 aaKnown RBP8.55□□□□□ -1.04
HERC1-208ENST00000560462 CDCA8Q53HL2 280 aa8.55□□□□□ -1.04
HERC1-208ENST00000560462 GAS2L2Q8NHY3 880 aa8.55□□□□□ -1.04
HERC1-208ENST00000560462 TRIB2Q92519 343 aa8.55□□□□□ -1.04
HERC1-208ENST00000560462 TRIM43Q96BQ3 446 aaPredicted RBP8.55□□□□□ -1.04
HERC1-208ENST00000560462 PRMT6Q96LA8 375 aaPredicted RBP8.55□□□□□ -1.04
HERC1-208ENST00000560462 TEPSINQ96N21 525 aa8.55□□□□□ -1.04
HERC1-208ENST00000560462 WRNIP1Q96S55 665 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms