RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 WASF1Q92558 559 aa11.32□□□□□ -0.6
RTF1-206ENST00000560447 PGBD1Q96JS3 809 aa11.32□□□□□ -0.6
RTF1-206ENST00000560447 MFRPQ9BY79 579 aa11.32□□□□□ -0.6
RTF1-206ENST00000560447 ANKRD2Q9GZV1 360 aa11.32□□□□□ -0.6
RTF1-206ENST00000560447 NBPF3Q9H094 633 aa11.32□□□□□ -0.6
RTF1-206ENST00000560447 PLSCR2Q9NRY7 297 aa11.32□□□□□ -0.6
RTF1-206ENST00000560447 POLR3EQ9NVU0 708 aa11.32□□□□□ -0.6
RTF1-206ENST00000560447 DACT1Q9NYF0 836 aa11.32□□□□□ -0.6
RTF1-206ENST00000560447 ORC3Q9UBD5 711 aaPredicted RBP11.32□□□□□ -0.6
RTF1-206ENST00000560447 ANAPC4Q9UJX5 808 aa11.32□□□□□ -0.6
RTF1-206ENST00000560447 A0A0G2JLW4 131 aa11.31□□□□□ -0.6
RTF1-206ENST00000560447 NUTM2BA6NNL0 878 aaPredicted RBP11.31□□□□□ -0.6
RTF1-206ENST00000560447 GOLGA6L6A8MZA4 724 aa11.31□□□□□ -0.6
RTF1-206ENST00000560447 NUTM2EB1AL46 878 aaPredicted RBP11.31□□□□□ -0.6
RTF1-206ENST00000560447 APPP05067 770 aa11.31□□□□□ -0.6
RTF1-206ENST00000560447 HOXB3P14651 431 aaPredicted RBP11.31□□□□□ -0.6
RTF1-206ENST00000560447 METAP2P50579 478 aaKnown RBP eCLIP11.31□□□□□ -0.6
RTF1-206ENST00000560447 TYRO3Q06418 890 aa11.31□□□□□ -0.6
RTF1-206ENST00000560447 CAVIN4Q5BKX8 364 aa11.31□□□□□ -0.6
RTF1-206ENST00000560447 ADALQ6DHV7 355 aa11.31□□□□□ -0.6
RTF1-206ENST00000560447 APOA5Q6Q788 366 aa11.31□□□□□ -0.6
RTF1-206ENST00000560447 SASS6Q6UVJ0 657 aa11.31□□□□□ -0.6
RTF1-206ENST00000560447 TBC1D10CQ8IV04 446 aa11.31□□□□□ -0.6
RTF1-206ENST00000560447 NUTM2AQ8IVF1 878 aaPredicted RBP11.31□□□□□ -0.6
RTF1-206ENST00000560447 MAGEB6Q8N7X4 407 aa11.31□□□□□ -0.6
RTF1-206ENST00000560447 LINC00116Q8NCU8 138 aa11.31□□□□□ -0.6
RTF1-206ENST00000560447 SEC31BQ9NQW1 1179 aa11.31□□□□□ -0.6
RTF1-206ENST00000560447 TFIP11Q9UBB9 837 aaKnown RBP11.31□□□□□ -0.6
RTF1-206ENST00000560447 CCDC196A0A1B0GTZ2 297 aa11.3□□□□□ -0.6
RTF1-206ENST00000560447 GSG1L2A8MUP6 293 aa11.3□□□□□ -0.6
RTF1-206ENST00000560447 ZBTB43O43298 467 aa11.3□□□□□ -0.6
RTF1-206ENST00000560447 MBD4O95243 580 aa11.3□□□□□ -0.6
RTF1-206ENST00000560447 FAM160A1Q05DH4 1040 aa11.3□□□□□ -0.6
RTF1-206ENST00000560447 FAM173BQ6P4H8 233 aa11.3□□□□□ -0.6
RTF1-206ENST00000560447 SYNE3Q6ZMZ3 975 aa11.3□□□□□ -0.6
RTF1-206ENST00000560447 MFSD6Q6ZSS7 791 aa11.3□□□□□ -0.6
RTF1-206ENST00000560447 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.3□□□□□ -0.6
RTF1-206ENST00000560447 CDAN1Q8IWY9 1227 aa11.3□□□□□ -0.6
RTF1-206ENST00000560447 HELBQ8NG08 1087 aaPredicted RBP11.3□□□□□ -0.6
RTF1-206ENST00000560447 IGDCC4Q8TDY8 1250 aa11.3□□□□□ -0.6
RTF1-206ENST00000560447 NCOA5Q9HCD5 579 aaKnown RBP11.3□□□□□ -0.6
RTF1-206ENST00000560447 NAP1L2Q9ULW6 460 aaPredicted RBP11.3□□□□□ -0.6
RTF1-206ENST00000560447 MYH6P13533 1939 aa11.29□□□□□ -0.6
RTF1-206ENST00000560447 OFD1O75665 1012 aa11.29□□□□□ -0.6
RTF1-206ENST00000560447 PTMAP06454 111 aaKnown RBP11.29□□□□□ -0.6
RTF1-206ENST00000560447 FAM98CQ17RN3 349 aaKnown RBP11.29□□□□□ -0.6
RTF1-206ENST00000560447 ERFEQ4G0M1 354 aa11.29□□□□□ -0.6
RTF1-206ENST00000560447 MYSM1Q5VVJ2 828 aa11.29□□□□□ -0.6
RTF1-206ENST00000560447 JMYQ8N9B5 988 aa11.29□□□□□ -0.6
RTF1-206ENST00000560447 TDRD7Q8NHU6 1098 aaKnown RBP11.29□□□□□ -0.6
RTF1-206ENST00000560447 NGLY1Q96IV0 654 aa11.29□□□□□ -0.6
RTF1-206ENST00000560447 NLRP3Q96P20 1036 aa11.29□□□□□ -0.6
RTF1-206ENST00000560447 USP28Q96RU2 1077 aa11.29□□□□□ -0.6
RTF1-206ENST00000560447 BRIP1Q9BX63 1249 aa11.29□□□□□ -0.6
RTF1-206ENST00000560447 LY9Q9HBG7 655 aa11.29□□□□□ -0.6
RTF1-206ENST00000560447 EPB41L4AQ9HCS5 686 aaPredicted RBP11.29□□□□□ -0.6
RTF1-206ENST00000560447 LRP2BPQ9P2M1 347 aa11.29□□□□□ -0.6
RTF1-206ENST00000560447 MRVI1Q9Y6F6 885 aa11.29□□□□□ -0.6
RTF1-206ENST00000560447 MORC2Q9Y6X9 1032 aaPredicted RBP11.29□□□□□ -0.6
RTF1-206ENST00000560447 A0A0G2JS52 829 aa11.28□□□□□ -0.6
RTF1-206ENST00000560447 ERICH2A1L162 156 aa11.28□□□□□ -0.6
RTF1-206ENST00000560447 CCDC69A6NI79 296 aa11.28□□□□□ -0.6
RTF1-206ENST00000560447 KCNQ2O43526 872 aa11.28□□□□□ -0.6
RTF1-206ENST00000560447 KINO60870 393 aaKnown RBP11.28□□□□□ -0.6
RTF1-206ENST00000560447 NR1I2O75469 434 aa11.28□□□□□ -0.6
RTF1-206ENST00000560447 ADCY5O95622 1261 aa11.28□□□□□ -0.6
RTF1-206ENST00000560447 IFNAR1P17181 557 aa11.28□□□□□ -0.6
RTF1-206ENST00000560447 TDO2P48775 406 aa11.28□□□□□ -0.6
RTF1-206ENST00000560447 BCAMP50895 628 aa11.28□□□□□ -0.6
RTF1-206ENST00000560447 KIF23Q02241 960 aaPredicted RBP11.28□□□□□ -0.6
RTF1-206ENST00000560447 TMEM67Q5HYA8 995 aa11.28□□□□□ -0.6
RTF1-206ENST00000560447 TPTE2Q6XPS3 522 aa11.28□□□□□ -0.6
RTF1-206ENST00000560447 CYB5R4Q7L1T6 521 aa11.28□□□□□ -0.6
RTF1-206ENST00000560447 CHST3Q7LGC8 479 aa11.28□□□□□ -0.6
RTF1-206ENST00000560447 FBXO33Q7Z6M2 555 aa11.28□□□□□ -0.6
RTF1-206ENST00000560447 CCAR1Q8IX12 1150 aaKnown RBP11.28□□□□□ -0.6
RTF1-206ENST00000560447 LINC00301Q8NCQ3 95 aa11.28□□□□□ -0.6
RTF1-206ENST00000560447 ENGASEQ8NFI3 743 aa11.28□□□□□ -0.6
RTF1-206ENST00000560447 MRPS27Q92552 414 aaKnown RBP11.28□□□□□ -0.6
RTF1-206ENST00000560447 SETDB2Q96T68 719 aa11.28□□□□□ -0.6
RTF1-206ENST00000560447 NOL10Q9BSC4 688 aaKnown RBP11.28□□□□□ -0.6
RTF1-206ENST00000560447 MINPP1Q9UNW1 487 aa11.28□□□□□ -0.6
RTF1-206ENST00000560447 SLC4A4Q9Y6R1 1079 aa11.28□□□□□ -0.6
RTF1-206ENST00000560447 MAGEB6P1A0A0J9YX57 407 aa11.27□□□□□ -0.61
RTF1-206ENST00000560447 GOLGA8AA7E2F4 631 aa11.27□□□□□ -0.61
RTF1-206ENST00000560447 B4E1Z4 1266 aa11.27□□□□□ -0.61
RTF1-206ENST00000560447 IFIT3O14879 490 aaKnown RBP11.27□□□□□ -0.61
RTF1-206ENST00000560447 PPP6R2O75170 966 aa11.27□□□□□ -0.61
RTF1-206ENST00000560447 ZPR1O75312 459 aa11.27□□□□□ -0.61
RTF1-206ENST00000560447 FMNL1O95466 1100 aaPredicted RBP11.27□□□□□ -0.61
RTF1-206ENST00000560447 FGRP09769 529 aa11.27□□□□□ -0.61
RTF1-206ENST00000560447 IARSP41252 1262 aaKnown RBP11.27□□□□□ -0.61
RTF1-206ENST00000560447 RPS8P62241 208 aaKnown RBP11.27□□□□□ -0.61
RTF1-206ENST00000560447 KIAA2012Q0VF49 1180 aa11.27□□□□□ -0.61
RTF1-206ENST00000560447 TRIM29Q14134 588 aa11.27□□□□□ -0.61
RTF1-206ENST00000560447 STK38Q15208 465 aa11.27□□□□□ -0.61
RTF1-206ENST00000560447 NTRK3Q16288 839 aa11.27□□□□□ -0.61
RTF1-206ENST00000560447 STX1AQ16623 288 aa11.27□□□□□ -0.61
RTF1-206ENST00000560447 CERS3Q8IU89 383 aa11.27□□□□□ -0.61
RTF1-206ENST00000560447 TIGD1Q96MW7 591 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms