RNA–Protein interactions for RNA: ENST00000560353.1

APH1B-208, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1B, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-208ENST00000560353 TNFRSF10AO00220 468 aa13.12□□□□□ -0.31
APH1B-208ENST00000560353 PLIN1O60240 522 aa13.12□□□□□ -0.31
APH1B-208ENST00000560353 ZNF853P0CG23 659 aa13.12□□□□□ -0.31
APH1B-208ENST00000560353 MDM2Q00987 491 aaPredicted RBP13.12□□□□□ -0.31
APH1B-208ENST00000560353 NOL9Q5SY16 702 aaKnown RBP13.12□□□□□ -0.31
APH1B-208ENST00000560353 SMCR8Q8TEV9 937 aaPredicted RBP13.12□□□□□ -0.31
APH1B-208ENST00000560353 RUNDC1Q96C34 613 aa13.12□□□□□ -0.31
APH1B-208ENST00000560353 FAM122AQ96E09 287 aa13.12□□□□□ -0.31
APH1B-208ENST00000560353 OGDHLQ9ULD0 1010 aa13.12□□□□□ -0.31
APH1B-208ENST00000560353 RPAP1Q9BWH6 1393 aaPredicted RBP13.11□□□□□ -0.31
APH1B-208ENST00000560353 MGAMO43451 1857 aa13.11□□□□□ -0.31
APH1B-208ENST00000560353 CASP7P55210 303 aa13.11□□□□□ -0.31
APH1B-208ENST00000560353 TBC1D22AQ8WUA7 517 aa13.11□□□□□ -0.31
APH1B-208ENST00000560353 KIF12Q96FN5 646 aa13.11□□□□□ -0.31
APH1B-208ENST00000560353 LBHD1Q9BQE6 289 aaPredicted RBP13.11□□□□□ -0.31
APH1B-208ENST00000560353 SEMA6BQ9H3T3 888 aa13.11□□□□□ -0.31
APH1B-208ENST00000560353 CIZ1Q9ULV3 898 aaPredicted RBP13.11□□□□□ -0.31
APH1B-208ENST00000560353 COL2A1P02458 1487 aaPredicted RBP13.1□□□□□ -0.31
APH1B-208ENST00000560353 A0A0G2JLL6 359 aaPredicted RBP13.1□□□□□ -0.31
APH1B-208ENST00000560353 GYG1P46976 350 aa13.1□□□□□ -0.31
APH1B-208ENST00000560353 GNAI1P63096 354 aa13.1□□□□□ -0.31
APH1B-208ENST00000560353 UBE4AQ14139 1066 aa13.1□□□□□ -0.31
APH1B-208ENST00000560353 GRIK5Q16478 980 aa13.1□□□□□ -0.31
APH1B-208ENST00000560353 APOBEC3HQ6NTF7 200 aaKnown RBP13.1□□□□□ -0.31
APH1B-208ENST00000560353 LDHAL6AQ6ZMR3 332 aa13.1□□□□□ -0.31
APH1B-208ENST00000560353 PRRT2Q7Z6L0 340 aaPredicted RBP13.1□□□□□ -0.31
APH1B-208ENST00000560353 C8orf58Q8NAV2 365 aa13.1□□□□□ -0.31
APH1B-208ENST00000560353 FAM151AQ8WW52 585 aa13.1□□□□□ -0.31
APH1B-208ENST00000560353 FAM84BQ96KN1 310 aaPredicted RBP13.1□□□□□ -0.31
APH1B-208ENST00000560353 MYH16Q9H6N6 1097 aa13.1□□□□□ -0.31
APH1B-208ENST00000560353 IFT57Q9NWB7 429 aa13.1□□□□□ -0.31
APH1B-208ENST00000560353 DNAH12Q6ZR08 3092 aa13.1□□□□□ -0.31
APH1B-208ENST00000560353 CALD1Q05682 793 aaKnown RBP13.09□□□□□ -0.31
APH1B-208ENST00000560353 GADL1Q6ZQY3 521 aa13.09□□□□□ -0.31
APH1B-208ENST00000560353 CNNM1Q9NRU3 951 aa13.09□□□□□ -0.31
APH1B-208ENST00000560353 RAPGEFL1Q9UHV5 662 aa13.09□□□□□ -0.31
APH1B-208ENST00000560353 CHMP3Q9Y3E7 222 aa13.09□□□□□ -0.31
APH1B-208ENST00000560353 ZHX2Q9Y6X8 837 aa13.09□□□□□ -0.31
APH1B-208ENST00000560353 PFASO15067 1338 aa13.09□□□□□ -0.31
APH1B-208ENST00000560353 GALR2O43603 387 aaPredicted RBP13.08□□□□□ -0.32
APH1B-208ENST00000560353 COL6A1P12109 1028 aa13.08□□□□□ -0.32
APH1B-208ENST00000560353 TAF7LQ5H9L4 462 aa13.08□□□□□ -0.32
APH1B-208ENST00000560353 TJAP1Q5JTD0 557 aa13.08□□□□□ -0.32
APH1B-208ENST00000560353 VPS37DQ86XT2 251 aa13.08□□□□□ -0.32
APH1B-208ENST00000560353 ANKRD13CQ8N6S4 541 aa13.08□□□□□ -0.32
APH1B-208ENST00000560353 STK31Q9BXU1 1019 aa13.08□□□□□ -0.32
APH1B-208ENST00000560353 PICK1Q9NRD5 415 aa13.08□□□□□ -0.32
APH1B-208ENST00000560353 PCDHB13Q9Y5F0 798 aa13.08□□□□□ -0.32
APH1B-208ENST00000560353 BDP1A6H8Y1 2624 aa13.07□□□□□ -0.32
APH1B-208ENST00000560353 FOXO4P98177 505 aa13.07□□□□□ -0.32
APH1B-208ENST00000560353 FAM110CQ1W6H9 321 aa13.07□□□□□ -0.32
APH1B-208ENST00000560353 LRRC26Q2I0M4 334 aa13.07□□□□□ -0.32
APH1B-208ENST00000560353 CCDC57Q2TAC2 916 aa13.07□□□□□ -0.32
APH1B-208ENST00000560353 HHIPL2Q6UWX4 724 aa13.07□□□□□ -0.32
APH1B-208ENST00000560353 MYLIPQ8WY64 445 aa13.07□□□□□ -0.32
APH1B-208ENST00000560353 MS4A3Q96HJ5 214 aa13.07□□□□□ -0.32
APH1B-208ENST00000560353 SUGT1Q9Y2Z0 365 aa13.07□□□□□ -0.32
APH1B-208ENST00000560353 MAST3O60307 1309 aa13.07□□□□□ -0.32
APH1B-208ENST00000560353 DDX60LQ5H9U9 1706 aaKnown RBP13.06□□□□□ -0.32
APH1B-208ENST00000560353 FRAT2O75474 233 aaPredicted RBP13.06□□□□□ -0.32
APH1B-208ENST00000560353 FOSL2P15408 326 aa13.06□□□□□ -0.32
APH1B-208ENST00000560353 TRIM32Q13049 653 aa13.06□□□□□ -0.32
APH1B-208ENST00000560353 CHAF1AQ13111 956 aaPredicted RBP13.06□□□□□ -0.32
APH1B-208ENST00000560353 FBXO33Q7Z6M2 555 aa13.06□□□□□ -0.32
APH1B-208ENST00000560353 LINS1Q8NG48 757 aa13.06□□□□□ -0.32
APH1B-208ENST00000560353 GJD2Q9UKL4 321 aa13.06□□□□□ -0.32
APH1B-208ENST00000560353 AFG3L2Q9Y4W6 797 aa13.06□□□□□ -0.32
APH1B-208ENST00000560353 TMEM265A0A087WTH1 108 aa13.05□□□□□ -0.32
APH1B-208ENST00000560353 MAP3K13O43283 966 aa13.05□□□□□ -0.32
APH1B-208ENST00000560353 PTPRAP18433 802 aa13.05□□□□□ -0.32
APH1B-208ENST00000560353 TCP10Q12799 353 aa13.05□□□□□ -0.32
APH1B-208ENST00000560353 MAP3K21Q5TCX8 1036 aa13.05□□□□□ -0.32
APH1B-208ENST00000560353 SCYL3Q8IZE3 742 aa13.05□□□□□ -0.32
APH1B-208ENST00000560353 ZNF594Q96JF6 807 aaPredicted RBP13.05□□□□□ -0.32
APH1B-208ENST00000560353 PNMA3Q9UL41 463 aa13.05□□□□□ -0.32
APH1B-208ENST00000560353 IQSEC3Q9UPP2 1182 aaPredicted RBP13.05□□□□□ -0.32
APH1B-208ENST00000560353 GCLCP48506 637 aaPredicted RBP13.04□□□□□ -0.32
APH1B-208ENST00000560353 LMBR1LQ6UX01 489 aa13.04□□□□□ -0.32
APH1B-208ENST00000560353 PRKAG2Q9UGJ0 569 aa13.04□□□□□ -0.32
APH1B-208ENST00000560353 AGTPBP1Q9UPW5 1226 aa13.04□□□□□ -0.32
APH1B-208ENST00000560353 PHF20L1A8MW92 1017 aa13.03□□□□□ -0.32
APH1B-208ENST00000560353 SMAD3P84022 425 aaKnown RBP13.03□□□□□ -0.32
APH1B-208ENST00000560353 WDR43Q15061 677 aaKnown RBP eCLIP13.03□□□□□ -0.32
APH1B-208ENST00000560353 CAVIN4Q5BKX8 364 aa13.03□□□□□ -0.32
APH1B-208ENST00000560353 G2E3Q7L622 706 aa13.03□□□□□ -0.32
APH1B-208ENST00000560353 TRMT44Q8IYL2 757 aaKnown RBP13.03□□□□□ -0.32
APH1B-208ENST00000560353 TRIB2Q92519 343 aa13.03□□□□□ -0.32
APH1B-208ENST00000560353 TTYH1Q9H313 450 aaPredicted RBP13.03□□□□□ -0.32
APH1B-208ENST00000560353 A0A1B0GUL6 1792 aa13.02□□□□□ -0.32
APH1B-208ENST00000560353 CDH23Q9H251 3354 aa13.02□□□□□ -0.32
APH1B-208ENST00000560353 XRCC5P13010 732 aaKnown RBP13.02□□□□□ -0.33
APH1B-208ENST00000560353 MAP3K12Q12852 859 aa13.02□□□□□ -0.33
APH1B-208ENST00000560353 RALBP1Q15311 655 aa13.02□□□□□ -0.33
APH1B-208ENST00000560353 TSPYL6Q8N831 410 aa13.02□□□□□ -0.33
APH1B-208ENST00000560353 DNAAF4Q8WXU2 420 aa13.02□□□□□ -0.33
APH1B-208ENST00000560353 TRIM75PA6NK02 468 aa13.01□□□□□ -0.33
APH1B-208ENST00000560353 PYGBP11216 843 aa13.01□□□□□ -0.33
APH1B-208ENST00000560353 NFIAQ12857 509 aa13.01□□□□□ -0.33
APH1B-208ENST00000560353 SHHQ15465 462 aa13.01□□□□□ -0.33
APH1B-208ENST00000560353 LHX8Q68G74 356 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms