RNA–Protein interactions for RNA: ENST00000560067.1

USP3-AS1-205, USP3 antisense RNA 1, humanhuman

TSL 3

Gene USP3-AS1, Length 366 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-AS1-205ENST00000560067 NPM3O75607 178 aaKnown RBP15.07■□□□□ 0
USP3-AS1-205ENST00000560067 TRPA1O75762 1119 aa15.07■□□□□ 0
USP3-AS1-205ENST00000560067 ATP5JP18859 108 aa15.07■□□□□ 0
USP3-AS1-205ENST00000560067 TM4SF4P48230 202 aa15.07■□□□□ 0
USP3-AS1-205ENST00000560067 INHBEP58166 350 aa15.07■□□□□ 0
USP3-AS1-205ENST00000560067 PPP4CP60510 307 aa15.07■□□□□ 0
USP3-AS1-205ENST00000560067 VGLL4Q14135 290 aa15.07■□□□□ 0
USP3-AS1-205ENST00000560067 TMED8Q6PL24 325 aaPredicted RBP15.07■□□□□ 0
USP3-AS1-205ENST00000560067 MAGEB6Q8N7X4 407 aa15.07■□□□□ 0
USP3-AS1-205ENST00000560067 DDX4Q9NQI0 724 aaKnown RBP15.07■□□□□ 0
USP3-AS1-205ENST00000560067 SAGE1Q9NXZ1 904 aa15.07■□□□□ 0
USP3-AS1-205ENST00000560067 GOLIM4O00461 696 aa15.06■□□□□ 0
USP3-AS1-205ENST00000560067 AAMPQ13685 434 aa15.06■□□□□ 0
USP3-AS1-205ENST00000560067 SH3RF3Q8TEJ3 882 aaPredicted RBP15.06■□□□□ 0
USP3-AS1-205ENST00000560067 OPTNQ96CV9 577 aa15.06■□□□□ 0
USP3-AS1-205ENST00000560067 BOLA2Q9H3K6 86 aa15.06■□□□□ 0
USP3-AS1-205ENST00000560067 SUPT16HQ9Y5B9 1047 aaKnown RBP15.06■□□□□ 0
USP3-AS1-205ENST00000560067 DDTLA6NHG4 134 aaPredicted RBP15.05■□□□□ -0
USP3-AS1-205ENST00000560067 SH3BP5LQ7L8J4 393 aa15.05■□□□□ -0
USP3-AS1-205ENST00000560067 ADGRA1Q86SQ6 560 aa15.05■□□□□ -0
USP3-AS1-205ENST00000560067 CERS3Q8IU89 383 aa15.05■□□□□ -0
USP3-AS1-205ENST00000560067 ZKSCAN4Q969J2 545 aaPredicted RBP15.05■□□□□ -0
USP3-AS1-205ENST00000560067 GPATCH3Q96I76 525 aa15.05■□□□□ -0
USP3-AS1-205ENST00000560067 ZBTB47Q9UFB7 747 aaPredicted RBP15.05■□□□□ -0
USP3-AS1-205ENST00000560067 RFX7Q2KHR2 1363 aa15.05■□□□□ -0
USP3-AS1-205ENST00000560067 GJA5P36382 358 aa15.04■□□□□ -0
USP3-AS1-205ENST00000560067 ERO1BQ86YB8 467 aa15.04■□□□□ -0
USP3-AS1-205ENST00000560067 TNS4Q8IZW8 715 aa15.04■□□□□ -0
USP3-AS1-205ENST00000560067 TGFBRAP1Q8WUH2 860 aa15.04■□□□□ -0
USP3-AS1-205ENST00000560067 OTUD5Q96G74 571 aa15.04■□□□□ -0
USP3-AS1-205ENST00000560067 HAUS7Q99871 368 aa15.04■□□□□ -0
USP3-AS1-205ENST00000560067 OSBPL5Q9H0X9 879 aaPredicted RBP15.04■□□□□ -0
USP3-AS1-205ENST00000560067 ECHDC1Q9NTX5 307 aa15.04■□□□□ -0
USP3-AS1-205ENST00000560067 PAG1Q9NWQ8 432 aa15.04■□□□□ -0
USP3-AS1-205ENST00000560067 ZNF112Q9UJU3 913 aa15.04■□□□□ -0
USP3-AS1-205ENST00000560067 SPDYE5A6NIY4 337 aa15.03■□□□□ -0
USP3-AS1-205ENST00000560067 ALDH1A1P00352 501 aa15.03■□□□□ -0
USP3-AS1-205ENST00000560067 INPP5BP32019 993 aa15.03■□□□□ -0
USP3-AS1-205ENST00000560067 DYNLL1P63167 89 aaKnown RBP15.03■□□□□ -0
USP3-AS1-205ENST00000560067 SLC9C2Q5TAH2 1124 aa15.03■□□□□ -0
USP3-AS1-205ENST00000560067 MIGA1Q8NAN2 632 aa15.03■□□□□ -0
USP3-AS1-205ENST00000560067 CNKSR2Q8WXI2 1034 aa15.03■□□□□ -0
USP3-AS1-205ENST00000560067 SNCAIPQ9Y6H5 919 aa15.03■□□□□ -0
USP3-AS1-205ENST00000560067 MYH2Q9UKX2 1941 aa15.02■□□□□ -0
USP3-AS1-205ENST00000560067 PDE6AP16499 860 aa15.02■□□□□ -0
USP3-AS1-205ENST00000560067 GTF2A2P52657 109 aa15.02■□□□□ -0
USP3-AS1-205ENST00000560067 HDAC1Q13547 482 aaPredicted RBP15.02■□□□□ -0
USP3-AS1-205ENST00000560067 OTUD7BQ6GQQ9 843 aa15.02■□□□□ -0
USP3-AS1-205ENST00000560067 IFNL1Q8IU54 200 aa15.02■□□□□ -0
USP3-AS1-205ENST00000560067 MAPKAPK5Q8IW41 473 aa15.02■□□□□ -0
USP3-AS1-205ENST00000560067 EDC3Q96F86 508 aaKnown RBP15.02■□□□□ -0
USP3-AS1-205ENST00000560067 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.02■□□□□ -0
USP3-AS1-205ENST00000560067 DHX36Q9H2U1 1008 aaKnown RBP15.02■□□□□ -0
USP3-AS1-205ENST00000560067 ATRNL1Q5VV63 1379 aa15.01□□□□□ -0.01
USP3-AS1-205ENST00000560067 PHF20L1A8MW92 1017 aa15.01□□□□□ -0.01
USP3-AS1-205ENST00000560067 TBC1D12O60347 775 aa15.01□□□□□ -0.01
USP3-AS1-205ENST00000560067 TBC1D8O95759 1140 aa15.01□□□□□ -0.01
USP3-AS1-205ENST00000560067 MAP3K10Q02779 954 aa15.01□□□□□ -0.01
USP3-AS1-205ENST00000560067 PPATQ06203 517 aa15.01□□□□□ -0.01
USP3-AS1-205ENST00000560067 NOL9Q5SY16 702 aaKnown RBP15.01□□□□□ -0.01
USP3-AS1-205ENST00000560067 EXOC6Q8TAG9 804 aa15.01□□□□□ -0.01
USP3-AS1-205ENST00000560067 GCC1Q96CN9 775 aa15.01□□□□□ -0.01
USP3-AS1-205ENST00000560067 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.01□□□□□ -0.01
USP3-AS1-205ENST00000560067 PICK1Q9NRD5 415 aa15.01□□□□□ -0.01
USP3-AS1-205ENST00000560067 PI4KBQ9UBF8 816 aa15.01□□□□□ -0.01
USP3-AS1-205ENST00000560067 AKAP11Q9UKA4 1901 aa15□□□□□ -0.01
USP3-AS1-205ENST00000560067 FLT1P17948 1338 aa15□□□□□ -0.01
USP3-AS1-205ENST00000560067 ZNF532Q9HCE3 1301 aa15□□□□□ -0.01
USP3-AS1-205ENST00000560067 MAGEB6P1A0A0J9YX57 407 aa15□□□□□ -0.01
USP3-AS1-205ENST00000560067 TESPA1A2RU30 521 aaPredicted RBP15□□□□□ -0.01
USP3-AS1-205ENST00000560067 USP5P45974 858 aa15□□□□□ -0.01
USP3-AS1-205ENST00000560067 PPIL2Q13356 520 aa15□□□□□ -0.01
USP3-AS1-205ENST00000560067 SNAPC2Q13487 334 aa15□□□□□ -0.01
USP3-AS1-205ENST00000560067 ANKRD45Q5TZF3 282 aa15□□□□□ -0.01
USP3-AS1-205ENST00000560067 MS4A4AQ96JQ5 239 aa15□□□□□ -0.01
USP3-AS1-205ENST00000560067 RWDD1Q9H446 243 aaPredicted RBP15□□□□□ -0.01
USP3-AS1-205ENST00000560067 CCL15-CCL14A0A0B4J2E2 113 aa14.99□□□□□ -0.01
USP3-AS1-205ENST00000560067 IGF2BP3O00425 579 aaKnown RBP eCLIP14.99□□□□□ -0.01
USP3-AS1-205ENST00000560067 IRF6O14896 467 aa14.99□□□□□ -0.01
USP3-AS1-205ENST00000560067 CTNND1O60716 968 aaKnown RBP14.99□□□□□ -0.01
USP3-AS1-205ENST00000560067 CETPP11597 493 aa14.99□□□□□ -0.01
USP3-AS1-205ENST00000560067 MAPK8IP2Q13387 824 aaPredicted RBP14.99□□□□□ -0.01
USP3-AS1-205ENST00000560067 CCL15Q16663 113 aa14.99□□□□□ -0.01
USP3-AS1-205ENST00000560067 ZSCAN25Q6NSZ9 544 aa14.99□□□□□ -0.01
USP3-AS1-205ENST00000560067 SCYL3Q8IZE3 742 aa14.99□□□□□ -0.01
USP3-AS1-205ENST00000560067 TRIM34Q9BYJ4 488 aa14.99□□□□□ -0.01
USP3-AS1-205ENST00000560067 SAP30BPQ9UHR5 308 aaKnown RBP14.99□□□□□ -0.01
USP3-AS1-205ENST00000560067 HERC5Q9UII4 1024 aaKnown RBP14.99□□□□□ -0.01
USP3-AS1-205ENST00000560067 COL2A1P02458 1487 aaPredicted RBP14.98□□□□□ -0.01
USP3-AS1-205ENST00000560067 TCRBV5S4A2TA0A5A2 114 aa14.98□□□□□ -0.01
USP3-AS1-205ENST00000560067 ERC2O15083 957 aa14.98□□□□□ -0.01
USP3-AS1-205ENST00000560067 HLA-DOAP06340 250 aa14.98□□□□□ -0.01
USP3-AS1-205ENST00000560067 SLURP2P0DP57 97 aa14.98□□□□□ -0.01
USP3-AS1-205ENST00000560067 ADD2P35612 726 aa14.98□□□□□ -0.01
USP3-AS1-205ENST00000560067 TSHZ3Q63HK5 1081 aa14.98□□□□□ -0.01
USP3-AS1-205ENST00000560067 FOXP4Q8IVH2 680 aaPredicted RBP14.98□□□□□ -0.01
USP3-AS1-205ENST00000560067 BRI3BPQ8WY22 251 aa14.98□□□□□ -0.01
USP3-AS1-205ENST00000560067 PTPN18Q99952 460 aa14.98□□□□□ -0.01
USP3-AS1-205ENST00000560067 RIOK1Q9BRS2 568 aaKnown RBP14.98□□□□□ -0.01
USP3-AS1-205ENST00000560067 CRNKL1Q9BZJ0 848 aaKnown RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms