RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 CHGBP05060 677 aa20.37■□□□□ 0.85
RPL28-209ENST00000560055 PDE4AP27815 886 aa20.37■□□□□ 0.85
RPL28-209ENST00000560055 SLFNL1Q499Z3 407 aa20.37■□□□□ 0.85
RPL28-209ENST00000560055 SH3BP5LQ7L8J4 393 aa20.37■□□□□ 0.85
RPL28-209ENST00000560055 COL2A1P02458 1487 aaPredicted RBP20.37■□□□□ 0.85
RPL28-209ENST00000560055 ATRNL1Q5VV63 1379 aa20.36■□□□□ 0.85
RPL28-209ENST00000560055 PICALMQ13492 652 aa20.36■□□□□ 0.85
RPL28-209ENST00000560055 ZSCAN25Q6NSZ9 544 aa20.36■□□□□ 0.85
RPL28-209ENST00000560055 TNS4Q8IZW8 715 aa20.36■□□□□ 0.85
RPL28-209ENST00000560055 CAPNS2Q96L46 248 aa20.36■□□□□ 0.85
RPL28-209ENST00000560055 WBP1LQ9NX94 342 aa20.36■□□□□ 0.85
RPL28-209ENST00000560055 FZD1Q9UP38 647 aa20.36■□□□□ 0.85
RPL28-209ENST00000560055 MYH7P12883 1935 aa20.35■□□□□ 0.85
RPL28-209ENST00000560055 PPP1R12BO60237 982 aaPredicted RBP20.35■□□□□ 0.85
RPL28-209ENST00000560055 USP2O75604 605 aaPredicted RBP20.35■□□□□ 0.85
RPL28-209ENST00000560055 LDLRAD1Q5T700 205 aa20.35■□□□□ 0.85
RPL28-209ENST00000560055 ARMC9Q7Z3E5 817 aa20.35■□□□□ 0.85
RPL28-209ENST00000560055 OSBPL5Q9H0X9 879 aaPredicted RBP20.35■□□□□ 0.85
RPL28-209ENST00000560055 FLT1P17948 1338 aa20.34■□□□□ 0.85
RPL28-209ENST00000560055 MAGEB6P1A0A0J9YX57 407 aa20.34■□□□□ 0.85
RPL28-209ENST00000560055 DDTLA6NHG4 134 aaPredicted RBP20.34■□□□□ 0.85
RPL28-209ENST00000560055 UBE2Q2LH0YL09 131 aa20.34■□□□□ 0.85
RPL28-209ENST00000560055 PRKG1Q13976 671 aa20.34■□□□□ 0.85
RPL28-209ENST00000560055 TTLL12Q14166 644 aaPredicted RBP20.34■□□□□ 0.85
RPL28-209ENST00000560055 CENPQQ7L2Z9 268 aaPredicted RBP20.34■□□□□ 0.85
RPL28-209ENST00000560055 TGFBRAP1Q8WUH2 860 aa20.34■□□□□ 0.85
RPL28-209ENST00000560055 HOOK2Q96ED9 719 aa20.34■□□□□ 0.85
RPL28-209ENST00000560055 ANGEL1Q9UNK9 670 aaKnown RBP20.34■□□□□ 0.85
RPL28-209ENST00000560055 CDK5RAP2Q96SN8 1893 aa20.33■□□□□ 0.85
RPL28-209ENST00000560055 FOCADQ5VW36 1801 aa20.33■□□□□ 0.85
RPL28-209ENST00000560055 AOC2O75106 756 aa20.33■□□□□ 0.85
RPL28-209ENST00000560055 ZFYP08048 801 aaPredicted RBP20.33■□□□□ 0.85
RPL28-209ENST00000560055 RGMBQ6NW40 437 aa20.33■□□□□ 0.85
RPL28-209ENST00000560055 EVI5LQ96CN4 794 aa20.33■□□□□ 0.85
RPL28-209ENST00000560055 CSRNP1Q96S65 589 aa20.33■□□□□ 0.85
RPL28-209ENST00000560055 THSD7BQ9C0I4 1608 aa20.33■□□□□ 0.84
RPL28-209ENST00000560055 UNCXA6NJT0 531 aa20.32■□□□□ 0.84
RPL28-209ENST00000560055 RNF113AO15541 343 aaKnown RBP20.32■□□□□ 0.84
RPL28-209ENST00000560055 MAP3K10Q02779 954 aa20.32■□□□□ 0.84
RPL28-209ENST00000560055 LCORLQ8N3X6 602 aa20.32■□□□□ 0.84
RPL28-209ENST00000560055 AIDAQ96BJ3 306 aa20.32■□□□□ 0.84
RPL28-209ENST00000560055 FAM155AB1AL88 458 aaPredicted RBP20.31■□□□□ 0.84
RPL28-209ENST00000560055 CAPN15O75808 1086 aa20.31■□□□□ 0.84
RPL28-209ENST00000560055 ECE1P42892 770 aa20.31■□□□□ 0.84
RPL28-209ENST00000560055 IREB2P48200 963 aaKnown RBP20.31■□□□□ 0.84
RPL28-209ENST00000560055 ERICH6BQ5W0A0 696 aa20.31■□□□□ 0.84
RPL28-209ENST00000560055 DCAF15Q66K64 600 aa20.31■□□□□ 0.84
RPL28-209ENST00000560055 MAPKAPK5Q8IW41 473 aa20.31■□□□□ 0.84
RPL28-209ENST00000560055 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.31■□□□□ 0.842e-9■□□□□ 9.3
RPL28-209ENST00000560055 APPBP2Q92624 585 aa20.31■□□□□ 0.84
RPL28-209ENST00000560055 FSD1Q9BTV5 496 aa20.31■□□□□ 0.84
RPL28-209ENST00000560055 PUS7LQ9H0K6 701 aaKnown RBP20.31■□□□□ 0.84
RPL28-209ENST00000560055 MBD4O95243 580 aa20.3■□□□□ 0.84
RPL28-209ENST00000560055 SLC10A3P09131 477 aa20.3■□□□□ 0.84
RPL28-209ENST00000560055 CTCFP49711 727 aaPredicted RBP20.3■□□□□ 0.84
RPL28-209ENST00000560055 ZNF157P51786 506 aaPredicted RBP20.3■□□□□ 0.84
RPL28-209ENST00000560055 LBX1P52954 281 aa20.3■□□□□ 0.84
RPL28-209ENST00000560055 LRRFIP1Q32MZ4 808 aaKnown RBP20.3■□□□□ 0.84
RPL28-209ENST00000560055 MIGA2Q7L4E1 593 aa20.3■□□□□ 0.84
RPL28-209ENST00000560055 TICAM2Q86XR7 235 aa20.3■□□□□ 0.84
RPL28-209ENST00000560055 RASAL3Q86YV0 1011 aa20.3■□□□□ 0.84
RPL28-209ENST00000560055 ZSCAN29Q8IWY8 852 aaPredicted RBP20.3■□□□□ 0.84
RPL28-209ENST00000560055 OSBP2Q969R2 916 aa20.3■□□□□ 0.84
RPL28-209ENST00000560055 ARMT1Q9H993 441 aa20.3■□□□□ 0.84
RPL28-209ENST00000560055 OTOFQ9HC10 1997 aa20.29■□□□□ 0.84
RPL28-209ENST00000560055 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.29■□□□□ 0.84
RPL28-209ENST00000560055 ANKRD13AQ8IZ07 590 aa20.29■□□□□ 0.84
RPL28-209ENST00000560055 CCDC102AQ96A19 550 aa20.29■□□□□ 0.84
RPL28-209ENST00000560055 ZNF341Q9BYN7 854 aa20.29■□□□□ 0.84
RPL28-209ENST00000560055 CRNKL1Q9BZJ0 848 aaKnown RBP20.29■□□□□ 0.84
RPL28-209ENST00000560055 DHX36Q9H2U1 1008 aaKnown RBP20.29■□□□□ 0.84
RPL28-209ENST00000560055 ZNF112Q9UJU3 913 aa20.29■□□□□ 0.84
RPL28-209ENST00000560055 AK9Q5TCS8 1911 aa20.28■□□□□ 0.84
RPL28-209ENST00000560055 TBC1D12O60347 775 aa20.28■□□□□ 0.84
RPL28-209ENST00000560055 HSPA8P11142 646 aaKnown RBP20.28■□□□□ 0.84
RPL28-209ENST00000560055 USP5P45974 858 aa20.28■□□□□ 0.84
RPL28-209ENST00000560055 MAP3K9P80192 1104 aa20.28■□□□□ 0.84
RPL28-209ENST00000560055 MAP2K1Q02750 393 aaPredicted RBP20.28■□□□□ 0.84
RPL28-209ENST00000560055 ZMYM1Q5SVZ6 1142 aa20.28■□□□□ 0.84
RPL28-209ENST00000560055 METTL16Q86W50 562 aaKnown RBP20.28■□□□□ 0.84
RPL28-209ENST00000560055 CCDC136Q96JN2 1154 aa20.28■□□□□ 0.84
RPL28-209ENST00000560055 CLMNQ96JQ2 1002 aa20.28■□□□□ 0.84
RPL28-209ENST00000560055 DDX60LQ5H9U9 1706 aaKnown RBP20.27■□□□□ 0.84
RPL28-209ENST00000560055 SLURP2P0DP57 97 aa20.27■□□□□ 0.84
RPL28-209ENST00000560055 VGLL4Q14135 290 aa20.27■□□□□ 0.84
RPL28-209ENST00000560055 SDR42E1Q8WUS8 393 aa20.27■□□□□ 0.84
RPL28-209ENST00000560055 WRNIP1Q96S55 665 aa20.27■□□□□ 0.84
RPL28-209ENST00000560055 STRBPQ96SI9 672 aaKnown RBP20.27■□□□□ 0.84
RPL28-209ENST00000560055 PRDM10Q9NQV6 1147 aa20.27■□□□□ 0.84
RPL28-209ENST00000560055 PI4KBQ9UBF8 816 aa20.27■□□□□ 0.84
RPL28-209ENST00000560055 PALD1Q9ULE6 856 aa20.27■□□□□ 0.84
RPL28-209ENST00000560055 SIPA1L1O43166 1804 aa20.26■□□□□ 0.83
RPL28-209ENST00000560055 PHF20L1A8MW92 1017 aa20.26■□□□□ 0.83
RPL28-209ENST00000560055 PRKAB2O43741 272 aa20.26■□□□□ 0.83
RPL28-209ENST00000560055 GSPT1P15170 499 aaKnown RBP20.26■□□□□ 0.83
RPL28-209ENST00000560055 NOGQ13253 232 aa20.26■□□□□ 0.83
RPL28-209ENST00000560055 ZIC5Q96T25 663 aa20.26■□□□□ 0.83
RPL28-209ENST00000560055 DCP1AQ9NPI6 582 aaPredicted RBP20.26■□□□□ 0.83
RPL28-209ENST00000560055 TRIM6-TRIM34B2RNG4 842 aa20.25■□□□□ 0.83
RPL28-209ENST00000560055 M0R2C6 588 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms