RNA–Protein interactions for RNA: ENST00000560013.5

TM2D3-209, Transcript of TM2 domain containing 3, human

TSL 2

Gene TM2D3, Length 1,868 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TM2D3-209	ENST00000560013	DBNDD1	Q9H9R9	158 aa		27.66	■■■□□ 2.02
TM2D3-209	ENST00000560013	CYP2D7	A0A087X1C5	515 aa		27.65	■■■□□ 2.02
TM2D3-209	ENST00000560013	DPEP1	P16444	411 aa		27.65	■■■□□ 2.02
TM2D3-209	ENST00000560013	KCNA3	P22001	575 aa		27.65	■■■□□ 2.02
TM2D3-209	ENST00000560013	BTD	P43251	543 aa		27.65	■■■□□ 2.02
TM2D3-209	ENST00000560013	SUPT20H	Q8NEM7	779 aa		27.65	■■■□□ 2.02
TM2D3-209	ENST00000560013	MTFR1L	Q9H019	292 aa		27.65	■■■□□ 2.02
TM2D3-209	ENST00000560013	MKRN1	Q9UHC7	482 aa	Known RBP	27.65	■■■□□ 2.02
TM2D3-209	ENST00000560013	CDK5RAP2	Q96SN8	1893 aa		27.65	■■■□□ 2.02
TM2D3-209	ENST00000560013	GAK	O14976	1311 aa		27.65	■■■□□ 2.02
TM2D3-209	ENST00000560013	CERS5	Q8N5B7	392 aa		27.64	■■■□□ 2.02
TM2D3-209	ENST00000560013	MTA3	Q9BTC8	594 aa		27.64	■■■□□ 2.02
TM2D3-209	ENST00000560013	GOLGA6L22	H0YM25	854 aa		27.64	■■■□□ 2.01
TM2D3-209	ENST00000560013	SMIM22	K7EJ46	135 aa		27.64	■■■□□ 2.01
TM2D3-209	ENST00000560013	FGR	P09769	529 aa		27.64	■■■□□ 2.01
TM2D3-209	ENST00000560013	ZSCAN22	P10073	491 aa	Predicted RBP	27.64	■■■□□ 2.01
TM2D3-209	ENST00000560013	PDC	P20941	246 aa		27.64	■■■□□ 2.01
TM2D3-209	ENST00000560013	DEK	P35659	375 aa	Known RBP	27.64	■■■□□ 2.01
TM2D3-209	ENST00000560013	LARP1B	Q659C4	914 aa	Known RBP	27.64	■■■□□ 2.01
TM2D3-209	ENST00000560013	PLCG2	P16885	1265 aa		27.63	■■■□□ 2.01
TM2D3-209	ENST00000560013	POLD1	P28340	1107 aa		27.63	■■■□□ 2.01
TM2D3-209	ENST00000560013	TMEM67	Q5HYA8	995 aa		27.63	■■■□□ 2.01
TM2D3-209	ENST00000560013	SMARCC2	Q8TAQ2	1214 aa		27.63	■■■□□ 2.01
TM2D3-209	ENST00000560013	ESR2	Q92731	530 aa		27.63	■■■□□ 2.01
TM2D3-209	ENST00000560013	MCM9	Q9NXL9	1143 aa		27.63	■■■□□ 2.01
TM2D3-209	ENST00000560013	ATF5	Q9Y2D1	282 aa	Predicted RBP	27.63	■■■□□ 2.01
TM2D3-209	ENST00000560013	IFIT3	O14879	490 aa	Known RBP	27.62	■■■□□ 2.01
TM2D3-209	ENST00000560013	JAK2	O60674	1132 aa		27.62	■■■□□ 2.01
TM2D3-209	ENST00000560013	LIFR	P42702	1097 aa		27.62	■■■□□ 2.01
TM2D3-209	ENST00000560013	LY9	Q9HBG7	655 aa		27.62	■■■□□ 2.01
TM2D3-209	ENST00000560013	NCOA5	Q9HCD5	579 aa	Known RBP	27.62	■■■□□ 2.01
TM2D3-209	ENST00000560013	PTMS	P20962	102 aa		27.61	■■■□□ 2.01
TM2D3-209	ENST00000560013	KIAA2012	Q0VF49	1180 aa		27.61	■■■□□ 2.01
TM2D3-209	ENST00000560013	SART3	Q15020	963 aa	Known RBP	27.61	■■■□□ 2.01
TM2D3-209	ENST00000560013	SGMS1	Q86VZ5	419 aa		27.61	■■■□□ 2.01
TM2D3-209	ENST00000560013	NSUN7	Q8NE18	718 aa	Known RBP	27.61	■■■□□ 2.01
TM2D3-209	ENST00000560013	HPS5	Q9UPZ3	1129 aa		27.61	■■■□□ 2.01
TM2D3-209	ENST00000560013	NAV1	Q8NEY1	1877 aa		27.61	■■■□□ 2.01
TM2D3-209	ENST00000560013	GOLGA8B	A8MQT2	603 aa		27.61	■■■□□ 2.01
TM2D3-209	ENST00000560013	ECE2	O60344	883 aa		27.61	■■■□□ 2.01
TM2D3-209	ENST00000560013	CTDNEP1	O95476	244 aa		27.61	■■■□□ 2.01
TM2D3-209	ENST00000560013	SLC3A2	P08195	630 aa	Known RBP	27.61	■■■□□ 2.01
TM2D3-209	ENST00000560013	TGFBRAP1	Q8WUH2	860 aa		27.61	■■■□□ 2.01
TM2D3-209	ENST00000560013	DHX16	O60231	1041 aa	Known RBP	27.6	■■■□□ 2.01
TM2D3-209	ENST00000560013	TGFB2	P61812	414 aa		27.6	■■■□□ 2.01
TM2D3-209	ENST00000560013	HMGN5	P82970	282 aa	Known RBP	27.6	■■■□□ 2.01
TM2D3-209	ENST00000560013	AOC3	Q16853	763 aa		27.6	■■■□□ 2.01
TM2D3-209	ENST00000560013	CCDC93	Q567U6	631 aa		27.6	■■■□□ 2.01
TM2D3-209	ENST00000560013	RTKN2	Q8IZC4	609 aa		27.6	■■■□□ 2.01
TM2D3-209	ENST00000560013	TTF2	Q9UNY4	1162 aa	Known RBP	27.6	■■■□□ 2.01
TM2D3-209	ENST00000560013	MTMR6	Q9Y217	621 aa		27.6	■■■□□ 2.01
TM2D3-209	ENST00000560013	SCN9A	Q15858	1988 aa		27.6	■■■□□ 2.01
TM2D3-209	ENST00000560013		F8W031	263 aa	Predicted RBP	27.59	■■■□□ 2.01
TM2D3-209	ENST00000560013	USP17L8	P0C7I0	530 aa		27.59	■■■□□ 2.01
TM2D3-209	ENST00000560013	STRIP1	Q5VSL9	837 aa		27.59	■■■□□ 2.01
TM2D3-209	ENST00000560013	MCTP1	Q6DN14	999 aa		27.59	■■■□□ 2.01
TM2D3-209	ENST00000560013	MXD3	Q9BW11	206 aa		27.59	■■■□□ 2.01
TM2D3-209	ENST00000560013	KCNQ5	Q9NR82	932 aa		27.59	■■■□□ 2.01
TM2D3-209	ENST00000560013	DAGLA	Q9Y4D2	1042 aa		27.59	■■■□□ 2.01
TM2D3-209	ENST00000560013	ERICH2	A1L162	156 aa		27.59	■■■□□ 2.01
TM2D3-209	ENST00000560013	FKBP1A	P62942	108 aa	Known RBP	27.59	■■■□□ 2.01
TM2D3-209	ENST00000560013	R3HDM1	Q15032	1099 aa	Known RBP	27.59	■■■□□ 2.01
TM2D3-209	ENST00000560013	NFXL1	Q6ZNB6	911 aa		27.59	■■■□□ 2.01
TM2D3-209	ENST00000560013	UPF1	Q92900	1129 aa	Known RBP eCLIP	27.59	■■■□□ 2.01
TM2D3-209	ENST00000560013	SENP2	Q9HC62	589 aa		27.59	■■■□□ 2.01
TM2D3-209	ENST00000560013	CYP2D6	P10635	497 aa		27.58	■■■□□ 2.01
TM2D3-209	ENST00000560013	RHBDL3	P58872	404 aa		27.58	■■■□□ 2.01
TM2D3-209	ENST00000560013	C12orf60	Q5U649	245 aa		27.58	■■■□□ 2.01
TM2D3-209	ENST00000560013	APOA5	Q6Q788	366 aa		27.58	■■■□□ 2.01
TM2D3-209	ENST00000560013	TEX11	Q8IYF3	940 aa		27.58	■■■□□ 2.01
TM2D3-209	ENST00000560013	ZKSCAN3	Q9BRR0	538 aa		27.58	■■■□□ 2.01
TM2D3-209	ENST00000560013	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	27.58	■■■□□ 2.01
TM2D3-209	ENST00000560013	PTPDC1	A2A3K4	754 aa		27.57	■■■□□ 2
TM2D3-209	ENST00000560013	ORC4	O43929	436 aa		27.57	■■■□□ 2
TM2D3-209	ENST00000560013	F13A1	P00488	732 aa		27.57	■■■□□ 2
TM2D3-209	ENST00000560013	AMOTL1	Q8IY63	956 aa		27.57	■■■□□ 2
TM2D3-209	ENST00000560013	TMTC2	Q8N394	836 aa		27.57	■■■□□ 2
TM2D3-209	ENST00000560013	FAM184A	Q8NB25	1140 aa		27.57	■■■□□ 2
TM2D3-209	ENST00000560013	DDX11	Q96FC9	970 aa		27.57	■■■□□ 2
TM2D3-209	ENST00000560013	ZNF646	O15015	1829 aa	Predicted RBP	27.57	■■■□□ 2
TM2D3-209	ENST00000560013	FOCAD	Q5VW36	1801 aa		27.57	■■■□□ 2
TM2D3-209	ENST00000560013	VPS37C	A5D8V6	355 aa	Predicted RBP	27.57	■■■□□ 2
TM2D3-209	ENST00000560013	EVX2	Q03828	476 aa		27.57	■■■□□ 2
TM2D3-209	ENST00000560013	PDE4B	Q07343	736 aa		27.57	■■■□□ 2
TM2D3-209	ENST00000560013	WTAP	Q15007	396 aa		27.57	■■■□□ 2
TM2D3-209	ENST00000560013	PSMD1	Q99460	953 aa		27.57	■■■□□ 2
TM2D3-209	ENST00000560013	UBAC1	Q9BSL1	405 aa		27.57	■■■□□ 2
TM2D3-209	ENST00000560013	CCDC69	A6NI79	296 aa		27.56	■■■□□ 2
TM2D3-209	ENST00000560013	PPIP5K2	O43314	1243 aa		27.56	■■■□□ 2
TM2D3-209	ENST00000560013	RANBP6	O60518	1105 aa	Known RBP	27.56	■■■□□ 2
TM2D3-209	ENST00000560013	MAPKAPK5	Q8IW41	473 aa		27.56	■■■□□ 2
TM2D3-209	ENST00000560013	PIM2	Q9P1W9	311 aa		27.56	■■■□□ 2
TM2D3-209	ENST00000560013	KIF3A	Q9Y496	699 aa		27.56	■■■□□ 2
TM2D3-209	ENST00000560013	USP17L3	A6NCW0	530 aa		27.55	■■■□□ 2
TM2D3-209	ENST00000560013	USP17L4	A6NCW7	530 aa		27.55	■■■□□ 2
TM2D3-209	ENST00000560013	PRDM1	O75626	825 aa		27.55	■■■□□ 2
TM2D3-209	ENST00000560013	DACT2	Q5SW24	774 aa		27.55	■■■□□ 2
TM2D3-209	ENST00000560013	HHIPL2	Q6UWX4	724 aa		27.55	■■■□□ 2
TM2D3-209	ENST00000560013	USP17L1	Q7RTZ2	530 aa		27.55	■■■□□ 2
TM2D3-209	ENST00000560013	ATP6V1D	Q9Y5K8	247 aa		27.55	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 12 ms