RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 GPAT2Q6NUI2 795 aa25.43■■□□□ 1.66
PSEN1-225ENST00000560005 CHMP4BQ9H444 224 aaKnown RBP25.43■■□□□ 1.66
PSEN1-225ENST00000560005 NOB1Q9ULX3 412 aaKnown RBP25.43■■□□□ 1.66
PSEN1-225ENST00000560005 CUL9Q8IWT3 2517 aa25.43■■□□□ 1.66
PSEN1-225ENST00000560005 MGAMO43451 1857 aa25.43■■□□□ 1.66
PSEN1-225ENST00000560005 SOX1O00570 391 aaPredicted RBP25.42■■□□□ 1.66
PSEN1-225ENST00000560005 NFIAQ12857 509 aa25.42■■□□□ 1.66
PSEN1-225ENST00000560005 RABL6Q3YEC7 729 aaPredicted RBP25.42■■□□□ 1.66
PSEN1-225ENST00000560005 NOL9Q5SY16 702 aaKnown RBP25.42■■□□□ 1.66
PSEN1-225ENST00000560005 API5Q9BZZ5 524 aaKnown RBP25.42■■□□□ 1.66
PSEN1-225ENST00000560005 AK9Q5TCS8 1911 aa25.41■■□□□ 1.66
PSEN1-225ENST00000560005 A0A1W2PPC1 479 aa25.41■■□□□ 1.66
PSEN1-225ENST00000560005 EVI5O60447 810 aa25.41■■□□□ 1.66
PSEN1-225ENST00000560005 C20orf194Q5TEA3 1177 aa25.41■■□□□ 1.66
PSEN1-225ENST00000560005 CDC42EP5Q6NZY7 148 aa25.41■■□□□ 1.66
PSEN1-225ENST00000560005 KLHDC4Q8TBB5 520 aa25.41■■□□□ 1.66
PSEN1-225ENST00000560005 UTYO14607 1347 aa25.4■■□□□ 1.66
PSEN1-225ENST00000560005 CXCL11O14625 94 aa25.4■■□□□ 1.66
PSEN1-225ENST00000560005 ADCY3O60266 1144 aa25.4■■□□□ 1.66
PSEN1-225ENST00000560005 ELNP15502 786 aa25.4■■□□□ 1.66
PSEN1-225ENST00000560005 ANKRD44Q8N8A2 993 aa25.4■■□□□ 1.66
PSEN1-225ENST00000560005 LRCH3Q96II8 777 aa25.4■■□□□ 1.66
PSEN1-225ENST00000560005 CCDC136Q96JN2 1154 aa25.4■■□□□ 1.66
PSEN1-225ENST00000560005 DAGLAQ9Y4D2 1042 aa25.4■■□□□ 1.66
PSEN1-225ENST00000560005 INHAP05111 366 aa25.39■■□□□ 1.66
PSEN1-225ENST00000560005 FLT3LGP49771 235 aa25.39■■□□□ 1.66
PSEN1-225ENST00000560005 PUM3Q15397 648 aaKnown RBP25.39■■□□□ 1.66
PSEN1-225ENST00000560005 DIXDC1Q155Q3 683 aa25.39■■□□□ 1.66
PSEN1-225ENST00000560005 PTPRCP08575 1304 aa25.38■■□□□ 1.65
PSEN1-225ENST00000560005 TFRCP02786 760 aaKnown RBP25.38■■□□□ 1.65
PSEN1-225ENST00000560005 IFIT1P09914 478 aaKnown RBP25.38■■□□□ 1.65
PSEN1-225ENST00000560005 WDR66Q8TBY9 1149 aa25.38■■□□□ 1.65
PSEN1-225ENST00000560005 DEFB118Q96PH6 123 aa25.38■■□□□ 1.65
PSEN1-225ENST00000560005 FAM198AQ9UFP1 575 aa25.38■■□□□ 1.65
PSEN1-225ENST00000560005 STAP2Q9UGK3 403 aa25.38■■□□□ 1.65
PSEN1-225ENST00000560005 TRIM27P14373 513 aa25.37■■□□□ 1.65
PSEN1-225ENST00000560005 FGFR2P21802 821 aa25.37■■□□□ 1.65
PSEN1-225ENST00000560005 MYH13Q9UKX3 1938 aa25.36■■□□□ 1.65
PSEN1-225ENST00000560005 ZFPM1Q8IX07 1006 aa25.36■■□□□ 1.65
PSEN1-225ENST00000560005 ZHX2Q9Y6X8 837 aa25.36■■□□□ 1.65
PSEN1-225ENST00000560005 A0A0G2JLL6 359 aaPredicted RBP25.35■■□□□ 1.65
PSEN1-225ENST00000560005 TNPO2O14787 897 aaKnown RBP25.35■■□□□ 1.65
PSEN1-225ENST00000560005 FASTKD5Q7L8L6 764 aaKnown RBP25.35■■□□□ 1.65
PSEN1-225ENST00000560005 PRRT2Q7Z6L0 340 aaPredicted RBP25.35■■□□□ 1.65
PSEN1-225ENST00000560005 PANK1Q8TE04 598 aa25.35■■□□□ 1.65
PSEN1-225ENST00000560005 PXYLP1Q8TE99 480 aa25.35■■□□□ 1.65
PSEN1-225ENST00000560005 USP40Q9NVE5 1235 aa25.35■■□□□ 1.65
PSEN1-225ENST00000560005 DDX19BQ9UMR2 479 aa25.35■■□□□ 1.65
PSEN1-225ENST00000560005 PRDX5P30044 214 aa25.34■■□□□ 1.65
PSEN1-225ENST00000560005 MVPQ14764 893 aaKnown RBP25.34■■□□□ 1.65
PSEN1-225ENST00000560005 GADL1Q6ZQY3 521 aa25.34■■□□□ 1.65
PSEN1-225ENST00000560005 SCYL3Q8IZE3 742 aa25.34■■□□□ 1.65
PSEN1-225ENST00000560005 PICK1Q9NRD5 415 aa25.34■■□□□ 1.65
PSEN1-225ENST00000560005 ATRNL1Q5VV63 1379 aa25.33■■□□□ 1.65
PSEN1-225ENST00000560005 PHF20L1A8MW92 1017 aa25.33■■□□□ 1.65
PSEN1-225ENST00000560005 SLC5A1P13866 664 aa25.33■■□□□ 1.65
PSEN1-225ENST00000560005 IRF5Q13568 498 aa25.33■■□□□ 1.65
PSEN1-225ENST00000560005 PAWRQ96IZ0 340 aaKnown RBP25.33■■□□□ 1.65
PSEN1-225ENST00000560005 PAK6Q9NQU5 681 aaPredicted RBP25.33■■□□□ 1.65
PSEN1-225ENST00000560005 TAOK2Q9UL54 1235 aa25.33■■□□□ 1.65
PSEN1-225ENST00000560005 COG6Q9Y2V7 657 aa25.33■■□□□ 1.65
PSEN1-225ENST00000560005 PTPRAP18433 802 aa25.32■■□□□ 1.64
PSEN1-225ENST00000560005 SMCR8Q8TEV9 937 aaPredicted RBP25.32■■□□□ 1.64
PSEN1-225ENST00000560005 CLUAP1Q96AJ1 413 aa25.32■■□□□ 1.64
PSEN1-225ENST00000560005 ALPK3Q96L96 1907 aa25.31■■□□□ 1.64
PSEN1-225ENST00000560005 CAPN2P17655 700 aa25.31■■□□□ 1.64
PSEN1-225ENST00000560005 LPIN2Q92539 896 aa25.31■■□□□ 1.64
PSEN1-225ENST00000560005 CRISPLD2Q9H0B8 497 aa25.31■■□□□ 1.64
PSEN1-225ENST00000560005 SLC45A1Q9Y2W3 748 aa25.31■■□□□ 1.64
PSEN1-225ENST00000560005 AFG3L2Q9Y4W6 797 aa25.31■■□□□ 1.64
PSEN1-225ENST00000560005 DOCK2Q92608 1830 aa25.3■■□□□ 1.64
PSEN1-225ENST00000560005 LDHBP07195 334 aaKnown RBP25.3■■□□□ 1.64
PSEN1-225ENST00000560005 B4GALNT3Q6L9W6 998 aa25.3■■□□□ 1.64
PSEN1-225ENST00000560005 DIS3LQ8TF46 1054 aaKnown RBP25.3■■□□□ 1.64
PSEN1-225ENST00000560005 RLBP1P12271 317 aa25.29■■□□□ 1.64
PSEN1-225ENST00000560005 RGS3P49796 1198 aa25.29■■□□□ 1.64
PSEN1-225ENST00000560005 NECAB2Q7Z6G3 386 aa25.29■■□□□ 1.64
PSEN1-225ENST00000560005 PTPRFP10586 1907 aa25.28■■□□□ 1.64
PSEN1-225ENST00000560005 EYA2O00167 538 aa25.28■■□□□ 1.64
PSEN1-225ENST00000560005 DOCK3Q8IZD9 2030 aa25.27■■□□□ 1.64
PSEN1-225ENST00000560005 TRIM75PA6NK02 468 aa25.27■■□□□ 1.64
PSEN1-225ENST00000560005 SLURP2P0DP57 97 aa25.27■■□□□ 1.64
PSEN1-225ENST00000560005 ZSCAN29Q8IWY8 852 aaPredicted RBP25.27■■□□□ 1.64
PSEN1-225ENST00000560005 C7orf61Q8IZ16 206 aa25.27■■□□□ 1.64
PSEN1-225ENST00000560005 ANKRD13CQ8N6S4 541 aa25.27■■□□□ 1.64
PSEN1-225ENST00000560005 COA7Q96BR5 231 aa25.27■■□□□ 1.64
PSEN1-225ENST00000560005 GDF15Q99988 308 aa25.27■■□□□ 1.64
PSEN1-225ENST00000560005 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.27■■□□□ 1.641e-9■■■■■ 54.1
PSEN1-225ENST00000560005 LRRFIP2Q9Y608 721 aaKnown RBP25.27■■□□□ 1.64
PSEN1-225ENST00000560005 MNX1P50219 401 aaPredicted RBP25.26■■□□□ 1.63
PSEN1-225ENST00000560005 SH3BP5LQ7L8J4 393 aa25.26■■□□□ 1.63
PSEN1-225ENST00000560005 ITPRIPQ8IWB1 547 aa25.26■■□□□ 1.63
PSEN1-225ENST00000560005 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.26■■□□□ 1.63
PSEN1-225ENST00000560005 ZMYND8Q9ULU4 1186 aaPredicted RBP25.26■■□□□ 1.63
PSEN1-225ENST00000560005 ENTPD3O75355 529 aa25.25■■□□□ 1.63
PSEN1-225ENST00000560005 BMP8BP34820 402 aa25.25■■□□□ 1.63
PSEN1-225ENST00000560005 RFX5P48382 616 aaPredicted RBP25.25■■□□□ 1.63
PSEN1-225ENST00000560005 CCDC84Q86UT8 332 aaPredicted RBP25.25■■□□□ 1.63
PSEN1-225ENST00000560005 TMEM57Q8N5G2 664 aa25.25■■□□□ 1.63
PSEN1-225ENST00000560005 IDI2Q9BXS1 227 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms