RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-204ENST00000559849 ANKRD13AQ8IZ07 590 aa16.57■□□□□ 0.24
CHRNB4-204ENST00000559849 SLC10A4Q96EP9 437 aa16.57■□□□□ 0.24
CHRNB4-204ENST00000559849 GTF3C3Q9Y5Q9 886 aa16.57■□□□□ 0.24
CHRNB4-204ENST00000559849 PDE6AP16499 860 aa16.56■□□□□ 0.24
CHRNB4-204ENST00000559849 TSHZ3Q63HK5 1081 aa16.56■□□□□ 0.24
CHRNB4-204ENST00000559849 RASAL3Q86YV0 1011 aa16.56■□□□□ 0.24
CHRNB4-204ENST00000559849 OTUD7AQ8TE49 926 aaPredicted RBP16.56■□□□□ 0.24
CHRNB4-204ENST00000559849 GLRX3O76003 335 aaKnown RBP16.55■□□□□ 0.24
CHRNB4-204ENST00000559849 MIGA1Q8NAN2 632 aa16.55■□□□□ 0.24
CHRNB4-204ENST00000559849 CSRNP1Q96S65 589 aa16.55■□□□□ 0.24
CHRNB4-204ENST00000559849 ZNF532Q9HCE3 1301 aa16.55■□□□□ 0.24
CHRNB4-204ENST00000559849 DYNLL1P63167 89 aaKnown RBP16.55■□□□□ 0.24
CHRNB4-204ENST00000559849 MAP3K9P80192 1104 aa16.55■□□□□ 0.24
CHRNB4-204ENST00000559849 MIGA2Q7L4E1 593 aa16.55■□□□□ 0.24
CHRNB4-204ENST00000559849 SALL3Q9BXA9 1300 aa16.54■□□□□ 0.24
CHRNB4-204ENST00000559849 DDTLA6NHG4 134 aaPredicted RBP16.54■□□□□ 0.24
CHRNB4-204ENST00000559849 ZSCAN25Q6NSZ9 544 aa16.54■□□□□ 0.24
CHRNB4-204ENST00000559849 SH3BP5LQ7L8J4 393 aa16.54■□□□□ 0.24
CHRNB4-204ENST00000559849 CHD1LQ86WJ1 897 aa16.54■□□□□ 0.24
CHRNB4-204ENST00000559849 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.54■□□□□ 0.24
CHRNB4-204ENST00000559849 PI4K2BQ8TCG2 481 aa16.54■□□□□ 0.24
CHRNB4-204ENST00000559849 TGFBRAP1Q8WUH2 860 aa16.54■□□□□ 0.24
CHRNB4-204ENST00000559849 ZNF341Q9BYN7 854 aa16.54■□□□□ 0.24
CHRNB4-204ENST00000559849 LNPKQ9C0E8 428 aa16.54■□□□□ 0.24
CHRNB4-204ENST00000559849 OSBPL5Q9H0X9 879 aaPredicted RBP16.54■□□□□ 0.24
CHRNB4-204ENST00000559849 WBP1LQ9NX94 342 aa16.54■□□□□ 0.24
CHRNB4-204ENST00000559849 TCRBV5S4A2TA0A5A2 114 aa16.54■□□□□ 0.24
CHRNB4-204ENST00000559849 ADD2P35612 726 aa16.54■□□□□ 0.24
CHRNB4-204ENST00000559849 NUCB1Q02818 461 aa16.54■□□□□ 0.24
CHRNB4-204ENST00000559849 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.54■□□□□ 0.24
CHRNB4-204ENST00000559849 CLMNQ96JQ2 1002 aa16.54■□□□□ 0.24
CHRNB4-204ENST00000559849 STAP2Q9UGK3 403 aa16.54■□□□□ 0.24
CHRNB4-204ENST00000559849 ATRNL1Q5VV63 1379 aa16.53■□□□□ 0.24
CHRNB4-204ENST00000559849 MAGEB6P1A0A0J9YX57 407 aa16.53■□□□□ 0.24
CHRNB4-204ENST00000559849 KIF23Q02241 960 aaPredicted RBP16.53■□□□□ 0.24
CHRNB4-204ENST00000559849 REM2Q8IYK8 340 aaPredicted RBP16.53■□□□□ 0.24
CHRNB4-204ENST00000559849 KBTBD3Q8NAB2 608 aa16.53■□□□□ 0.24
CHRNB4-204ENST00000559849 WRNIP1Q96S55 665 aa16.53■□□□□ 0.24
CHRNB4-204ENST00000559849 ZIC5Q96T25 663 aa16.53■□□□□ 0.24
CHRNB4-204ENST00000559849 DHX36Q9H2U1 1008 aaKnown RBP16.53■□□□□ 0.24
CHRNB4-204ENST00000559849 CSADQ9Y600 493 aa16.53■□□□□ 0.24
CHRNB4-204ENST00000559849 MYH7P12883 1935 aa16.52■□□□□ 0.24
CHRNB4-204ENST00000559849 PDE1AP54750 535 aa16.52■□□□□ 0.24
CHRNB4-204ENST00000559849 MAP3K10Q02779 954 aa16.52■□□□□ 0.24
CHRNB4-204ENST00000559849 UBE3CQ15386 1083 aa16.52■□□□□ 0.24
CHRNB4-204ENST00000559849 RIOK1Q9BRS2 568 aaKnown RBP16.52■□□□□ 0.24
CHRNB4-204ENST00000559849 BEGAINQ9BUH8 593 aa16.52■□□□□ 0.24
CHRNB4-204ENST00000559849 THSD7BQ9C0I4 1608 aa16.52■□□□□ 0.24
CHRNB4-204ENST00000559849 COL2A1P02458 1487 aaPredicted RBP16.52■□□□□ 0.23
CHRNB4-204ENST00000559849 CDK5RAP2Q96SN8 1893 aa16.52■□□□□ 0.23
CHRNB4-204ENST00000559849 HSPA1AP0DMV8 641 aaKnown RBP16.52■□□□□ 0.23
CHRNB4-204ENST00000559849 HSPA1BP0DMV9 641 aaKnown RBP16.52■□□□□ 0.23
CHRNB4-204ENST00000559849 SPRYD7Q5W111 196 aa16.52■□□□□ 0.23
CHRNB4-204ENST00000559849 MAPKAPK5Q8IW41 473 aa16.52■□□□□ 0.23
CHRNB4-204ENST00000559849 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.52■□□□□ 0.23
CHRNB4-204ENST00000559849 ZNF112Q9UJU3 913 aa16.52■□□□□ 0.23
CHRNB4-204ENST00000559849 ZBTB48P10074 688 aaPredicted RBP16.51■□□□□ 0.23
CHRNB4-204ENST00000559849 VGLL4Q14135 290 aa16.51■□□□□ 0.23
CHRNB4-204ENST00000559849 LRRFIP1Q32MZ4 808 aaKnown RBP16.51■□□□□ 0.23
CHRNB4-204ENST00000559849 AIDAQ96BJ3 306 aa16.51■□□□□ 0.23
CHRNB4-204ENST00000559849 PI4KBQ9UBF8 816 aa16.51■□□□□ 0.23
CHRNB4-204ENST00000559849 FLT1P17948 1338 aa16.51■□□□□ 0.23
CHRNB4-204ENST00000559849 FOCADQ5VW36 1801 aa16.51■□□□□ 0.23
CHRNB4-204ENST00000559849 TBC1D12O60347 775 aa16.5■□□□□ 0.23
CHRNB4-204ENST00000559849 USP5P45974 858 aa16.5■□□□□ 0.23
CHRNB4-204ENST00000559849 ZKSCAN4Q969J2 545 aaPredicted RBP16.5■□□□□ 0.23
CHRNB4-204ENST00000559849 ELP3Q9H9T3 547 aa16.5■□□□□ 0.23
CHRNB4-204ENST00000559849 OTOFQ9HC10 1997 aa16.5■□□□□ 0.23
CHRNB4-204ENST00000559849 CRNKL1Q9BZJ0 848 aaKnown RBP16.5■□□□□ 0.23
CHRNB4-204ENST00000559849 ZFYP08048 801 aaPredicted RBP16.49■□□□□ 0.23
CHRNB4-204ENST00000559849 MKRN3Q13064 507 aaKnown RBP16.49■□□□□ 0.23
CHRNB4-204ENST00000559849 SLFNL1Q499Z3 407 aa16.49■□□□□ 0.23
CHRNB4-204ENST00000559849 WNK4Q96J92 1243 aa16.49■□□□□ 0.23
CHRNB4-204ENST00000559849 INPP5BP32019 993 aa16.49■□□□□ 0.23
CHRNB4-204ENST00000559849 INHBEP58166 350 aa16.49■□□□□ 0.23
CHRNB4-204ENST00000559849 FOXP4Q8IVH2 680 aaPredicted RBP16.49■□□□□ 0.23
CHRNB4-204ENST00000559849 OPTNQ96CV9 577 aa16.49■□□□□ 0.23
CHRNB4-204ENST00000559849 PALD1Q9ULE6 856 aa16.49■□□□□ 0.23
CHRNB4-204ENST00000559849 PHF20L1A8MW92 1017 aa16.48■□□□□ 0.23
CHRNB4-204ENST00000559849 RNF113AO15541 343 aaKnown RBP16.48■□□□□ 0.23
CHRNB4-204ENST00000559849 CHGBP05060 677 aa16.48■□□□□ 0.23
CHRNB4-204ENST00000559849 TM4SF4P48230 202 aa16.48■□□□□ 0.23
CHRNB4-204ENST00000559849 ERO1BQ86YB8 467 aa16.48■□□□□ 0.23
CHRNB4-204ENST00000559849 LCORLQ8N3X6 602 aa16.48■□□□□ 0.23
CHRNB4-204ENST00000559849 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.48■□□□□ 0.23
CHRNB4-204ENST00000559849 HERC5Q9UII4 1024 aaKnown RBP16.48■□□□□ 0.23
CHRNB4-204ENST00000559849 SNCAIPQ9Y6H5 919 aa16.48■□□□□ 0.23
CHRNB4-204ENST00000559849 MYH1P12882 1939 aa16.47■□□□□ 0.23
CHRNB4-204ENST00000559849 CA12O43570 354 aa16.47■□□□□ 0.23
CHRNB4-204ENST00000559849 SREBF2Q12772 1141 aa16.47■□□□□ 0.23
CHRNB4-204ENST00000559849 PLEKHM2Q8IWE5 1019 aa16.47■□□□□ 0.23
CHRNB4-204ENST00000559849 PUS7LQ9H0K6 701 aaKnown RBP16.47■□□□□ 0.23
CHRNB4-204ENST00000559849 OSBPL3Q9H4L5 887 aa16.47■□□□□ 0.23
CHRNB4-204ENST00000559849 ARMT1Q9H993 441 aa16.47■□□□□ 0.23
CHRNB4-204ENST00000559849 MANSC4A6NHS7 340 aaPredicted RBP16.47■□□□□ 0.23
CHRNB4-204ENST00000559849 SPDYE5A6NIY4 337 aa16.47■□□□□ 0.23
CHRNB4-204ENST00000559849 CTNND1O60716 968 aaKnown RBP16.47■□□□□ 0.23
CHRNB4-204ENST00000559849 MBD4O95243 580 aa16.47■□□□□ 0.23
CHRNB4-204ENST00000559849 HLA-DOAP06340 250 aa16.47■□□□□ 0.23
CHRNB4-204ENST00000559849 EVI5LQ96CN4 794 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms