RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 CXCL11O14625 94 aa15.08■□□□□ 0
SPG11-219ENST00000559822 CCDC158Q5M9N0 1113 aa15.08■□□□□ 0
SPG11-219ENST00000559822 NBPF11Q86T75 865 aa15.08■□□□□ 0
SPG11-219ENST00000559822 ZFPM1Q8IX07 1006 aa15.08■□□□□ 0
SPG11-219ENST00000559822 SCYL3Q8IZE3 742 aa15.08■□□□□ 0
SPG11-219ENST00000559822 SSH3Q8TE77 659 aa15.08■□□□□ 0
SPG11-219ENST00000559822 ARMC5Q96C12 935 aa15.08■□□□□ 0
SPG11-219ENST00000559822 NOL10Q9BSC4 688 aaKnown RBP15.08■□□□□ 0
SPG11-219ENST00000559822 RAI14Q9P0K7 980 aa15.08■□□□□ 0
SPG11-219ENST00000559822 ZBED9Q6R2W3 1325 aa15.08■□□□□ 0
SPG11-219ENST00000559822 ATRNL1Q5VV63 1379 aa15.08■□□□□ 0
SPG11-219ENST00000559822 PDHXO00330 501 aa15.07■□□□□ 0
SPG11-219ENST00000559822 IGSF3O75054 1194 aa15.07■□□□□ 0
SPG11-219ENST00000559822 PRMT2P55345 433 aa15.07■□□□□ 0
SPG11-219ENST00000559822 LACTBP83111 547 aaPredicted RBP15.07■□□□□ 0
SPG11-219ENST00000559822 ATP8B2P98198 1209 aa15.07■□□□□ 0
SPG11-219ENST00000559822 MAP3K10Q02779 954 aa15.07■□□□□ 0
SPG11-219ENST00000559822 PICALMQ13492 652 aa15.07■□□□□ 0
SPG11-219ENST00000559822 TTC39AQ5SRH9 613 aa15.07■□□□□ 0
SPG11-219ENST00000559822 NSUN4Q96CB9 384 aaKnown RBP15.07■□□□□ 0
SPG11-219ENST00000559822 PARK7Q99497 189 aaKnown RBP15.07■□□□□ 0
SPG11-219ENST00000559822 LRP2BPQ9P2M1 347 aa15.07■□□□□ 0
SPG11-219ENST00000559822 PHF20L1A8MW92 1017 aa15.06■□□□□ 0
SPG11-219ENST00000559822 CTNND1O60716 968 aaKnown RBP15.06■□□□□ 0
SPG11-219ENST00000559822 SURF6O75683 361 aaKnown RBP15.06■□□□□ 0
SPG11-219ENST00000559822 MCAMP43121 646 aa15.06■□□□□ 0
SPG11-219ENST00000559822 SLC9C1Q4G0N8 1177 aa15.06■□□□□ 0
SPG11-219ENST00000559822 TNNI3KQ59H18 835 aa15.06■□□□□ 0
SPG11-219ENST00000559822 FASTKD5Q7L8L6 764 aaKnown RBP15.06■□□□□ 0
SPG11-219ENST00000559822 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.06■□□□□ 0
SPG11-219ENST00000559822 FPGT-TNNI3KV9GXZ4 949 aa15.06■□□□□ 0
SPG11-219ENST00000559822 COL2A1P02458 1487 aaPredicted RBP15.06■□□□□ 0
SPG11-219ENST00000559822 DDTLA6NHG4 134 aaPredicted RBP15.05■□□□□ -0
SPG11-219ENST00000559822 TBC1D12O60347 775 aa15.05■□□□□ -0
SPG11-219ENST00000559822 BAG3O95817 575 aa15.05■□□□□ -0
SPG11-219ENST00000559822 MS4A1P11836 297 aa15.05■□□□□ -0
SPG11-219ENST00000559822 PLCG2P16885 1265 aa15.05■□□□□ -0
SPG11-219ENST00000559822 RHBDL3P58872 404 aa15.05■□□□□ -0
SPG11-219ENST00000559822 C17orf99Q6UX52 265 aa15.05■□□□□ -0
SPG11-219ENST00000559822 PI16Q6UXB8 463 aa15.05■□□□□ -0
SPG11-219ENST00000559822 TBC1D9Q6ZT07 1266 aa15.05■□□□□ -0
SPG11-219ENST00000559822 SH3BP5LQ7L8J4 393 aa15.05■□□□□ -0
SPG11-219ENST00000559822 TMEM106CQ9BVX2 250 aa15.05■□□□□ -0
SPG11-219ENST00000559822 DDX4Q9NQI0 724 aaKnown RBP15.05■□□□□ -0
SPG11-219ENST00000559822 ZHX2Q9Y6X8 837 aa15.05■□□□□ -0
SPG11-219ENST00000559822 RBBP6Q7Z6E9 1792 aaKnown RBP15.05■□□□□ -0
SPG11-219ENST00000559822 MAST2Q6P0Q8 1798 aa15.04■□□□□ -0
SPG11-219ENST00000559822 PTPRAP18433 802 aa15.04■□□□□ -0
SPG11-219ENST00000559822 HOXD10P28358 340 aa15.04■□□□□ -0
SPG11-219ENST00000559822 PRPF38BQ5VTL8 546 aaKnown RBP15.04■□□□□ -0
SPG11-219ENST00000559822 ZNF384Q8TF68 577 aa15.04■□□□□ -0
SPG11-219ENST00000559822 ZNF512BQ96KM6 892 aaPredicted RBP15.04■□□□□ -0
SPG11-219ENST00000559822 C1orf115Q9H7X2 142 aa15.04■□□□□ -0
SPG11-219ENST00000559822 NOP58Q9Y2X3 529 aaKnown RBP15.04■□□□□ -0
SPG11-219ENST00000559822 PTCH2Q9Y6C5 1203 aa15.04■□□□□ -0
SPG11-219ENST00000559822 DOCK1Q14185 1865 aa15.03■□□□□ -0
SPG11-219ENST00000559822 A0A0G2JLL6 359 aaPredicted RBP15.03■□□□□ -0
SPG11-219ENST00000559822 ZBTB7BO15156 539 aaPredicted RBP15.03■□□□□ -0
SPG11-219ENST00000559822 CAP1Q01518 475 aa15.03■□□□□ -0
SPG11-219ENST00000559822 NAA16Q6N069 864 aaPredicted RBP15.03■□□□□ -0
SPG11-219ENST00000559822 PRRT2Q7Z6L0 340 aaPredicted RBP15.03■□□□□ -0
SPG11-219ENST00000559822 TEX11Q8IYF3 940 aa15.03■□□□□ -0
SPG11-219ENST00000559822 ZNF333Q96JL9 665 aa15.03■□□□□ -0
SPG11-219ENST00000559822 DBNDD2Q9BQY9 259 aa15.03■□□□□ -0
SPG11-219ENST00000559822 TBC1D2Q9BYX2 928 aa15.03■□□□□ -0
SPG11-219ENST00000559822 OSBPL5Q9H0X9 879 aaPredicted RBP15.03■□□□□ -0
SPG11-219ENST00000559822 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.03■□□□□ -0
SPG11-219ENST00000559822 CPA4Q9UI42 421 aa15.03■□□□□ -0
SPG11-219ENST00000559822 TNRC18O15417 2968 aaPredicted RBP15.03■□□□□ -0
SPG11-219ENST00000559822 ADGRA2Q96PE1 1338 aa15.02■□□□□ -0
SPG11-219ENST00000559822 RLBP1P12271 317 aa15.02■□□□□ -0
SPG11-219ENST00000559822 MOGSQ13724 837 aa15.02■□□□□ -0
SPG11-219ENST00000559822 ERC1Q8IUD2 1116 aa15.02■□□□□ -0
SPG11-219ENST00000559822 DHX36Q9H2U1 1008 aaKnown RBP15.02■□□□□ -0
SPG11-219ENST00000559822 SLC45A1Q9Y2W3 748 aa15.02■□□□□ -0
SPG11-219ENST00000559822 AFG3L2Q9Y4W6 797 aa15.02■□□□□ -0
SPG11-219ENST00000559822 POTEFA5A3E0 1075 aa15.01□□□□□ -0.01
SPG11-219ENST00000559822 PSMC4P43686 418 aa15.01□□□□□ -0.01
SPG11-219ENST00000559822 GPAT2Q6NUI2 795 aa15.01□□□□□ -0.01
SPG11-219ENST00000559822 GADL1Q6ZQY3 521 aa15.01□□□□□ -0.01
SPG11-219ENST00000559822 CERS3Q8IU89 383 aa15.01□□□□□ -0.01
SPG11-219ENST00000559822 ARHGAP39Q9C0H5 1083 aa15.01□□□□□ -0.01
SPG11-219ENST00000559822 SNRKQ9NRH2 765 aa15.01□□□□□ -0.01
SPG11-219ENST00000559822 HERC5Q9UII4 1024 aaKnown RBP15.01□□□□□ -0.01
SPG11-219ENST00000559822 KIAA0100Q14667 2235 aaKnown RBP15□□□□□ -0.01
SPG11-219ENST00000559822 FMNL1O95466 1100 aaPredicted RBP15□□□□□ -0.01
SPG11-219ENST00000559822 CYP2E1P05181 493 aaPredicted RBP15□□□□□ -0.01
SPG11-219ENST00000559822 FCGRTP55899 365 aa15□□□□□ -0.01
SPG11-219ENST00000559822 PPP4CP60510 307 aa15□□□□□ -0.01
SPG11-219ENST00000559822 SLC4A8Q2Y0W8 1093 aa15□□□□□ -0.01
SPG11-219ENST00000559822 HSP90AB4PQ58FF6 505 aa15□□□□□ -0.01
SPG11-219ENST00000559822 CEP85Q6P2H3 762 aa15□□□□□ -0.01
SPG11-219ENST00000559822 AATFQ9NY61 560 aaKnown RBP eCLIP15□□□□□ -0.01
SPG11-219ENST00000559822 SRRDQ9UH36 339 aa15□□□□□ -0.01
SPG11-219ENST00000559822 DBNLQ9UJU6 430 aaKnown RBP15□□□□□ -0.01
SPG11-219ENST00000559822 HTTP42858 3142 aa14.99□□□□□ -0.01
SPG11-219ENST00000559822 TRIM75PA6NK02 468 aa14.99□□□□□ -0.01
SPG11-219ENST00000559822 BCRP11274 1271 aa14.99□□□□□ -0.01
SPG11-219ENST00000559822 TMED8Q6PL24 325 aaPredicted RBP14.99□□□□□ -0.01
SPG11-219ENST00000559822 RAET1EQ8TD07 263 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms